RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 DENND3A2RUS2 1198 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 GPR182O15218 404 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 BMP15O95972 392 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 CA3P07451 260 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 CDC25AP30304 524 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 RARRES1P49788 294 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 CEBPZQ03701 1054 aaKnown RBP14.27□□□□□ -0.13
USE1-209ENST00000601592 PDIA5Q14554 519 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 SF3A1Q15459 793 aaKnown RBP14.27□□□□□ -0.13
USE1-209ENST00000601592 IL17AQ16552 155 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 FAM173BQ6P4H8 233 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 MAEAQ7L5Y9 396 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 FAM228AQ86W67 206 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 KSR1Q8IVT5 923 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 ZNF710Q8N1W2 664 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 IGSF22Q8N9C0 903 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 TCP11Q8WWU5 503 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 NACC1Q96RE7 527 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 FTHL17Q9BXU8 183 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 GCOM2Q9BZD3 368 aaPredicted RBP14.27□□□□□ -0.13
USE1-209ENST00000601592 TTYH1Q9H313 450 aaPredicted RBP14.27□□□□□ -0.13
USE1-209ENST00000601592 ADAMTS10Q9H324 1103 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 ZNF576Q9H609 170 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 ATP6V0A4Q9HBG4 840 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 ERVK-5Q9HDB9 667 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 ST3GAL5Q9UNP4 418 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 COL4A3BPQ9Y5P4 624 aa14.27□□□□□ -0.13
USE1-209ENST00000601592 TMEM265A0A087WTH1 108 aa14.26□□□□□ -0.13
USE1-209ENST00000601592 A0A087WZ62 844 aa14.26□□□□□ -0.13
USE1-209ENST00000601592 ARHGEF35A5YM69 484 aa14.26□□□□□ -0.13
USE1-209ENST00000601592 GAS2O43903 313 aaKnown RBP14.26□□□□□ -0.13
USE1-209ENST00000601592 CSDE1O75534 798 aaKnown RBP14.26□□□□□ -0.13
USE1-209ENST00000601592 DGAT1O75907 488 aa14.26□□□□□ -0.13
USE1-209ENST00000601592 GJB5O95377 273 aa14.26□□□□□ -0.13
USE1-209ENST00000601592 SRGAP2CP0DJJ0 459 aa14.26□□□□□ -0.13
USE1-209ENST00000601592 FGFR4P22455 802 aa14.26□□□□□ -0.13
USE1-209ENST00000601592 EIF4BP23588 611 aaKnown RBP14.26□□□□□ -0.13
USE1-209ENST00000601592 ARL6IP4Q66PJ3 421 aaKnown RBP14.26□□□□□ -0.13
USE1-209ENST00000601592 LINC01599Q8WXQ3 324 aa14.26□□□□□ -0.13
USE1-209ENST00000601592 CDK5RAP3Q96JB5 506 aa14.26□□□□□ -0.13
USE1-209ENST00000601592 YME1L1Q96TA2 773 aa14.26□□□□□ -0.13
USE1-209ENST00000601592 FDXACB1Q9BRP7 624 aaPredicted RBP14.26□□□□□ -0.13
USE1-209ENST00000601592 SEMA6BQ9H3T3 888 aa14.26□□□□□ -0.13
USE1-209ENST00000601592 DDX19AQ9NUU7 478 aaKnown RBP14.26□□□□□ -0.13
USE1-209ENST00000601592 MTMR10Q9NXD2 777 aa14.26□□□□□ -0.13
USE1-209ENST00000601592 KIAA1024Q9UPX6 916 aa14.26□□□□□ -0.13
USE1-209ENST00000601592 CLIC4Q9Y696 253 aa14.26□□□□□ -0.13
USE1-209ENST00000601592 STK24Q9Y6E0 443 aa14.26□□□□□ -0.13
USE1-209ENST00000601592 LCHNA4D1U4 455 aa14.25□□□□□ -0.13
USE1-209ENST00000601592 ENPP3O14638 875 aa14.25□□□□□ -0.13
USE1-209ENST00000601592 XRCC6P12956 609 aaKnown RBP eCLIP14.25□□□□□ -0.13
USE1-209ENST00000601592 DARSP14868 501 aaKnown RBP14.25□□□□□ -0.13
USE1-209ENST00000601592 CDC42EP1Q00587 391 aa14.25□□□□□ -0.13
USE1-209ENST00000601592 LAMTOR4Q0VGL1 99 aa14.25□□□□□ -0.13
USE1-209ENST00000601592 ECM1Q16610 540 aa14.25□□□□□ -0.13
USE1-209ENST00000601592 ZNF410Q86VK4 478 aa14.25□□□□□ -0.13
USE1-209ENST00000601592 PRPF31Q8WWY3 499 aaKnown RBP14.25□□□□□ -0.13
USE1-209ENST00000601592 RAD9AQ99638 391 aa14.25□□□□□ -0.13
USE1-209ENST00000601592 ADAM2Q99965 735 aa14.25□□□□□ -0.13
USE1-209ENST00000601592 TMX1Q9H3N1 280 aa14.25□□□□□ -0.13
USE1-209ENST00000601592 ZSCAN16Q9H4T2 348 aaPredicted RBP14.25□□□□□ -0.13
USE1-209ENST00000601592 CERS4Q9HA82 394 aa14.25□□□□□ -0.13
USE1-209ENST00000601592 XPNPEP1Q9NQW7 623 aa14.25□□□□□ -0.13
USE1-209ENST00000601592 COL4A4P53420 1690 aaPredicted RBP14.25□□□□□ -0.13
USE1-209ENST00000601592 KIAA1671Q9BY89 1806 aa14.25□□□□□ -0.13
USE1-209ENST00000601592 MGEA5O60502 916 aa14.24□□□□□ -0.13
USE1-209ENST00000601592 MUTP22033 750 aa14.24□□□□□ -0.13
USE1-209ENST00000601592 SFPQP23246 707 aaKnown RBP eCLIP14.24□□□□□ -0.13
USE1-209ENST00000601592 BECN1Q14457 450 aa14.24□□□□□ -0.13
USE1-209ENST00000601592 FOXD4L6Q3SYB3 417 aaPredicted RBP14.24□□□□□ -0.13
USE1-209ENST00000601592 FAM102BQ5T8I3 360 aa14.24□□□□□ -0.13
USE1-209ENST00000601592 FOXD4L3Q6VB84 417 aaPredicted RBP14.24□□□□□ -0.13
USE1-209ENST00000601592 RNF149Q8NC42 400 aa14.24□□□□□ -0.13
USE1-209ENST00000601592 RASSF8Q8NHQ8 419 aa14.24□□□□□ -0.13
USE1-209ENST00000601592 TOP1MTQ969P6 601 aa14.24□□□□□ -0.13
USE1-209ENST00000601592 PLIN2Q99541 437 aa14.24□□□□□ -0.13
USE1-209ENST00000601592 POLR3FQ9H1D9 316 aaPredicted RBP14.24□□□□□ -0.13
USE1-209ENST00000601592 TSPYL2Q9H2G4 693 aaPredicted RBP14.24□□□□□ -0.13
USE1-209ENST00000601592 BHMT2Q9H2M3 363 aa14.24□□□□□ -0.13
USE1-209ENST00000601592 DBR1Q9UK59 544 aaKnown RBP14.24□□□□□ -0.13
USE1-209ENST00000601592 LRFN2Q9ULH4 789 aa14.24□□□□□ -0.13
USE1-209ENST00000601592 INSL6Q9Y581 213 aa14.24□□□□□ -0.13
USE1-209ENST00000601592 RALGAPA2Q2PPJ7 1873 aa14.24□□□□□ -0.13
USE1-209ENST00000601592 FNDC1Q4ZHG4 1894 aaPredicted RBP14.24□□□□□ -0.13
USE1-209ENST00000601592 SSBP05455 408 aaKnown RBP eCLIP14.23□□□□□ -0.13
USE1-209ENST00000601592 ZSCAN20P17040 1043 aaPredicted RBP14.23□□□□□ -0.13
USE1-209ENST00000601592 MARCKSP29966 332 aaPredicted RBP14.23□□□□□ -0.13
USE1-209ENST00000601592 TFDP1Q14186 410 aa14.23□□□□□ -0.13
USE1-209ENST00000601592 GRIN2CQ14957 1233 aa14.23□□□□□ -0.13
USE1-209ENST00000601592 PADI6Q6TGC4 694 aa14.23□□□□□ -0.13
USE1-209ENST00000601592 CATSPER4Q7RTX7 472 aa14.23□□□□□ -0.13
USE1-209ENST00000601592 RTN4RL1Q86UN2 441 aaPredicted RBP14.23□□□□□ -0.13
USE1-209ENST00000601592 CABP7Q86V35 215 aa14.23□□□□□ -0.13
USE1-209ENST00000601592 MCPH1Q8NEM0 835 aa14.23□□□□□ -0.13
USE1-209ENST00000601592 ASAP3Q8TDY4 903 aa14.23□□□□□ -0.13
USE1-209ENST00000601592 MYLIPQ8WY64 445 aa14.23□□□□□ -0.13
USE1-209ENST00000601592 GUCD1Q96NT3 240 aa14.23□□□□□ -0.13
USE1-209ENST00000601592 MMTAG2Q9BU76 263 aaKnown RBP14.23□□□□□ -0.13
USE1-209ENST00000601592 INO80BQ9C086 356 aaPredicted RBP14.23□□□□□ -0.13
USE1-209ENST00000601592 GPRC5CQ9NQ84 441 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms