RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 EMC4Q5J8M3 183 aa5.9□□□□□ -1.46
VRK3-222ENST00000601324 HABP4Q5JVS0 413 aaKnown RBP5.9□□□□□ -1.46
VRK3-222ENST00000601324 ABHD17CQ6PCB6 329 aa5.9□□□□□ -1.46
VRK3-222ENST00000601324 MPZL3Q6UWV2 235 aa5.9□□□□□ -1.46
VRK3-222ENST00000601324 RPTNQ6XPR3 784 aa5.9□□□□□ -1.46
VRK3-222ENST00000601324 UBE2R2Q712K3 238 aaPredicted RBP5.9□□□□□ -1.46
VRK3-222ENST00000601324 OTOP3Q7RTS5 596 aa5.9□□□□□ -1.46
VRK3-222ENST00000601324 HDGFL2Q7Z4V5 671 aaPredicted RBP5.9□□□□□ -1.46
VRK3-222ENST00000601324 DDX53Q86TM3 631 aaKnown RBP5.9□□□□□ -1.46
VRK3-222ENST00000601324 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.9□□□□□ -1.46
VRK3-222ENST00000601324 DDX1Q92499 740 aaKnown RBP5.9□□□□□ -1.46
VRK3-222ENST00000601324 SEC14L1Q92503 715 aa5.9□□□□□ -1.46
VRK3-222ENST00000601324 AP5M1Q9H0R1 490 aa5.9□□□□□ -1.46
VRK3-222ENST00000601324 COQ6Q9Y2Z9 468 aa5.9□□□□□ -1.46
VRK3-222ENST00000601324 SCN4AP35499 1836 aa5.9□□□□□ -1.47
VRK3-222ENST00000601324 TJP1Q07157 1748 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 ZC3H12DA2A288 527 aaKnown RBP5.89□□□□□ -1.47
VRK3-222ENST00000601324 GSG1L2A8MUP6 293 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 F8W031 263 aaPredicted RBP5.89□□□□□ -1.47
VRK3-222ENST00000601324 HRKO00198 91 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 KRIT1O00522 736 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 PDE8AO60658 829 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 JMJD7P0C870 316 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 TAL1P17542 331 aaPredicted RBP5.89□□□□□ -1.47
VRK3-222ENST00000601324 MAPKAPK2P49137 400 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 YBX1P67809 324 aaKnown RBP5.89□□□□□ -1.47
VRK3-222ENST00000601324 ST5P78524 1137 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 RAB3GAP1Q15042 981 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 PLEKHN1Q494U1 663 aaPredicted RBP5.89□□□□□ -1.47
VRK3-222ENST00000601324 RNF187Q5TA31 235 aaPredicted RBP5.89□□□□□ -1.47
VRK3-222ENST00000601324 CST9Q5W186 159 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 OLFML2BQ68BL8 750 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 CNNM4Q6P4Q7 775 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 PPM1KQ8N3J5 372 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 IGSF22Q8N9C0 903 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 LIN37Q96GY3 246 aaPredicted RBP5.89□□□□□ -1.47
VRK3-222ENST00000601324 COG3Q96JB2 828 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 CAPNS2Q96L46 248 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 TARS2Q9BW92 718 aaKnown RBP5.89□□□□□ -1.47
VRK3-222ENST00000601324 SLC6A20Q9NP91 592 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 TERF2IPQ9NYB0 399 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 FAM53CQ9NYF3 392 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 SAMD15Q9P1V8 674 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 KLHL14Q9P2G3 628 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 DBR1Q9UK59 544 aaKnown RBP5.89□□□□□ -1.47
VRK3-222ENST00000601324 FLT4P35916 1363 aa5.89□□□□□ -1.47
VRK3-222ENST00000601324 ANKRD31Q8N7Z5 1873 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 ERVV-2B6SEH9 535 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 HGSO14964 777 aaPredicted RBP5.88□□□□□ -1.47
VRK3-222ENST00000601324 MAFKO60675 156 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 TADA3O75528 432 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 MAP2K2P36507 400 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 DNM2P50570 870 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 SLC9A5Q14940 896 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 CRY1Q16526 586 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 CFAP100Q494V2 611 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 STEAP3Q658P3 488 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 CDCA2Q69YH5 1023 aaPredicted RBP5.88□□□□□ -1.47
VRK3-222ENST00000601324 CYP4F22Q6NT55 531 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 THNSL2Q86YJ6 484 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 IFNL2Q8IZJ0 200 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 CNTROBQ8N137 903 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 AHI1Q8N157 1196 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 PIP4K2CQ8TBX8 421 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 GPR101Q96P66 508 aaPredicted RBP5.88□□□□□ -1.47
VRK3-222ENST00000601324 TESK2Q96S53 571 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 ZNF552Q9H707 407 aaPredicted RBP5.88□□□□□ -1.47
VRK3-222ENST00000601324 SPC25Q9HBM1 224 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 RXFP1Q9HBX9 757 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 DDX21Q9NR30 783 aaKnown RBP eCLIP5.88□□□□□ -1.47
VRK3-222ENST00000601324 CATSPERZQ9NTU4 200 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 CBLCQ9ULV8 474 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 MAPRE3Q9UPY8 281 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 ZNF652Q9Y2D9 606 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 SIT1Q9Y3P8 196 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.88□□□□□ -1.47
VRK3-222ENST00000601324 SOS1Q07889 1333 aaPredicted RBP5.88□□□□□ -1.47
VRK3-222ENST00000601324 ZNF541Q9H0D2 1346 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 SNED1Q8TER0 1413 aa5.88□□□□□ -1.47
VRK3-222ENST00000601324 ZNF561-AS1K7EIQ3 104 aa5.87□□□□□ -1.47
VRK3-222ENST00000601324 NKRFO15226 690 aaKnown RBP eCLIP5.87□□□□□ -1.47
VRK3-222ENST00000601324 SGSM2O43147 1006 aa5.87□□□□□ -1.47
VRK3-222ENST00000601324 DNAJC6O75061 913 aa5.87□□□□□ -1.47
VRK3-222ENST00000601324 GLRX3O76003 335 aaKnown RBP5.87□□□□□ -1.47
VRK3-222ENST00000601324 SERPINB2P05120 415 aa5.87□□□□□ -1.47
VRK3-222ENST00000601324 VIL1P09327 827 aaKnown RBP5.87□□□□□ -1.47
VRK3-222ENST00000601324 COL6A2P12110 1019 aa5.87□□□□□ -1.47
VRK3-222ENST00000601324 PDE6AP16499 860 aa5.87□□□□□ -1.47
VRK3-222ENST00000601324 STAT3P40763 770 aa5.87□□□□□ -1.47
VRK3-222ENST00000601324 NEK4P51957 841 aa5.87□□□□□ -1.47
VRK3-222ENST00000601324 LACTBP83111 547 aaPredicted RBP5.87□□□□□ -1.47
VRK3-222ENST00000601324 GPR19Q15760 415 aa5.87□□□□□ -1.47
VRK3-222ENST00000601324 TMEM177Q53S58 311 aa5.87□□□□□ -1.47
VRK3-222ENST00000601324 PIK3R6Q5UE93 754 aa5.87□□□□□ -1.47
VRK3-222ENST00000601324 OVCH1Q7RTY7 1134 aa5.87□□□□□ -1.47
VRK3-222ENST00000601324 FILIP1Q7Z7B0 1213 aa5.87□□□□□ -1.47
VRK3-222ENST00000601324 C2CD5Q86YS7 1000 aa5.87□□□□□ -1.47
VRK3-222ENST00000601324 UHMK1Q8TAS1 419 aaKnown RBP5.87□□□□□ -1.47
VRK3-222ENST00000601324 PHOSPHO1Q8TCT1 267 aa5.87□□□□□ -1.47
VRK3-222ENST00000601324 TSPAN17Q96FV3 270 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms