RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 RFC5P40937 340 aa18.09■□□□□ 0.49
LSM4-206ENST00000600289 CDC42EP1Q00587 391 aa18.09■□□□□ 0.49
LSM4-206ENST00000600289 CYP4A11Q02928 519 aa18.09■□□□□ 0.49
LSM4-206ENST00000600289 CTTNQ14247 550 aaKnown RBP18.09■□□□□ 0.49
LSM4-206ENST00000600289 NBR1Q14596 966 aa18.09■□□□□ 0.49
LSM4-206ENST00000600289 SKIV2LQ15477 1246 aaKnown RBP18.09■□□□□ 0.49
LSM4-206ENST00000600289 TMEM266Q2M3C6 531 aa18.09■□□□□ 0.49
LSM4-206ENST00000600289 ODR4Q5SWX8 454 aa18.09■□□□□ 0.49
LSM4-206ENST00000600289 BRAPQ7Z569 592 aa18.09■□□□□ 0.49
LSM4-206ENST00000600289 LRRC71Q8N4P6 559 aa18.09■□□□□ 0.49
LSM4-206ENST00000600289 POLR3CQ9BUI4 534 aaPredicted RBP18.09■□□□□ 0.49
LSM4-206ENST00000600289 DHX33Q9H6R0 707 aaKnown RBP18.09■□□□□ 0.49
LSM4-206ENST00000600289 TUFT1Q9NNX1 390 aa18.09■□□□□ 0.49
LSM4-206ENST00000600289 VTNP04004 478 aa18.08■□□□□ 0.48
LSM4-206ENST00000600289 XRCC6P12956 609 aaKnown RBP eCLIP18.08■□□□□ 0.48
LSM4-206ENST00000600289 POU3F3P20264 500 aaPredicted RBP18.08■□□□□ 0.48
LSM4-206ENST00000600289 CD52P31358 61 aa18.08■□□□□ 0.48
LSM4-206ENST00000600289 TECP42680 631 aa18.08■□□□□ 0.48
LSM4-206ENST00000600289 GPC3P51654 580 aa18.08■□□□□ 0.48
LSM4-206ENST00000600289 PAK2Q13177 524 aa18.08■□□□□ 0.48
LSM4-206ENST00000600289 PTGDRQ13258 359 aa18.08■□□□□ 0.48
LSM4-206ENST00000600289 PDIA5Q14554 519 aa18.08■□□□□ 0.48
LSM4-206ENST00000600289 PLA2G4FQ68DD2 849 aa18.08■□□□□ 0.48
LSM4-206ENST00000600289 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.08■□□□□ 0.486e-40■■■■■ 76.3
LSM4-206ENST00000600289 TPH2Q8IWU9 490 aa18.08■□□□□ 0.48
LSM4-206ENST00000600289 IGSF22Q8N9C0 903 aa18.08■□□□□ 0.48
LSM4-206ENST00000600289 ERMNQ8TAM6 284 aa18.08■□□□□ 0.48
LSM4-206ENST00000600289 ADAMTS10Q9H324 1103 aa18.08■□□□□ 0.48
LSM4-206ENST00000600289 ERVK-5Q9HDB9 667 aa18.08■□□□□ 0.48
LSM4-206ENST00000600289 ANKEF1Q9NU02 776 aa18.08■□□□□ 0.48
LSM4-206ENST00000600289 PADI3Q9ULW8 664 aa18.08■□□□□ 0.48
LSM4-206ENST00000600289 AKT3Q9Y243 479 aa18.08■□□□□ 0.48
LSM4-206ENST00000600289 MTCH2Q9Y6C9 303 aa18.08■□□□□ 0.48
LSM4-206ENST00000600289 STK24Q9Y6E0 443 aa18.08■□□□□ 0.48
LSM4-206ENST00000600289 KIAA1671Q9BY89 1806 aa18.07■□□□□ 0.48
LSM4-206ENST00000600289 SPATA31C1P0DKV0 1188 aa18.07■□□□□ 0.48
LSM4-206ENST00000600289 RPA1P27694 616 aa18.07■□□□□ 0.48
LSM4-206ENST00000600289 DNM2P50570 870 aa18.07■□□□□ 0.48
LSM4-206ENST00000600289 RABGGTBP53611 331 aa18.07■□□□□ 0.48
LSM4-206ENST00000600289 HTRA4P83105 476 aaPredicted RBP18.07■□□□□ 0.48
LSM4-206ENST00000600289 ATP2C1P98194 919 aaPredicted RBP18.07■□□□□ 0.48
LSM4-206ENST00000600289 KIZQ2M2Z5 673 aa18.07■□□□□ 0.48
LSM4-206ENST00000600289 HAUS3Q68CZ6 603 aa18.07■□□□□ 0.48
LSM4-206ENST00000600289 TMEM40Q8WWA1 233 aa18.07■□□□□ 0.48
LSM4-206ENST00000600289 SLC7A3Q8WY07 619 aa18.07■□□□□ 0.48
LSM4-206ENST00000600289 TOP1MTQ969P6 601 aa18.07■□□□□ 0.48
LSM4-206ENST00000600289 CEP170P1Q96L14 293 aa18.07■□□□□ 0.48
LSM4-206ENST00000600289 RAB34Q9BZG1 259 aa18.07■□□□□ 0.48
LSM4-206ENST00000600289 SUGCTQ9HAC7 445 aa18.07■□□□□ 0.48
LSM4-206ENST00000600289 CDHR5Q9HBB8 845 aa18.07■□□□□ 0.48
LSM4-206ENST00000600289 COG5Q9UP83 839 aa18.07■□□□□ 0.48
LSM4-206ENST00000600289 FNDC1Q4ZHG4 1894 aaPredicted RBP18.06■□□□□ 0.48
LSM4-206ENST00000600289 RPS6KA5O75582 802 aa18.06■□□□□ 0.48
LSM4-206ENST00000600289 MYOGP15173 224 aa18.06■□□□□ 0.48
LSM4-206ENST00000600289 SYT1P21579 422 aa18.06■□□□□ 0.48
LSM4-206ENST00000600289 NPEPPSP55786 919 aa18.06■□□□□ 0.48
LSM4-206ENST00000600289 NLRP11P59045 1033 aaKnown RBP18.06■□□□□ 0.48
LSM4-206ENST00000600289 DRP2Q13474 957 aa18.06■□□□□ 0.48
LSM4-206ENST00000600289 PPP2R2DQ66LE6 453 aa18.06■□□□□ 0.48
LSM4-206ENST00000600289 CATSPER3Q86XQ3 398 aa18.06■□□□□ 0.48
LSM4-206ENST00000600289 HSCBQ8IWL3 235 aa18.06■□□□□ 0.48
LSM4-206ENST00000600289 LINC01599Q8WXQ3 324 aa18.06■□□□□ 0.48
LSM4-206ENST00000600289 RAD9AQ99638 391 aa18.06■□□□□ 0.48
LSM4-206ENST00000600289 OSMRQ99650 979 aa18.06■□□□□ 0.48
LSM4-206ENST00000600289 SH2D3AQ9BRG2 576 aa18.06■□□□□ 0.48
LSM4-206ENST00000600289 NOC2LQ9Y3T9 749 aaKnown RBP18.06■□□□□ 0.48
LSM4-206ENST00000600289 RFXAPO00287 272 aa18.05■□□□□ 0.48
LSM4-206ENST00000600289 ENPP3O14638 875 aa18.05■□□□□ 0.48
LSM4-206ENST00000600289 GPR182O15218 404 aa18.05■□□□□ 0.48
LSM4-206ENST00000600289 MED24O75448 989 aa18.05■□□□□ 0.48
LSM4-206ENST00000600289 EIF4BP23588 611 aaKnown RBP18.05■□□□□ 0.48
LSM4-206ENST00000600289 POLGP54098 1239 aaPredicted RBP18.05■□□□□ 0.48
LSM4-206ENST00000600289 ARL6IP4Q66PJ3 421 aaKnown RBP18.05■□□□□ 0.48
LSM4-206ENST00000600289 ZNF410Q86VK4 478 aa18.05■□□□□ 0.48
LSM4-206ENST00000600289 FAM228AQ86W67 206 aa18.05■□□□□ 0.48
LSM4-206ENST00000600289 ZNF579Q8NAF0 562 aaKnown RBP18.05■□□□□ 0.48
LSM4-206ENST00000600289 SP7Q8TDD2 431 aaPredicted RBP18.05■□□□□ 0.48
LSM4-206ENST00000600289 TMX1Q9H3N1 280 aa18.05■□□□□ 0.48
LSM4-206ENST00000600289 DBR1Q9UK59 544 aaKnown RBP18.05■□□□□ 0.48
LSM4-206ENST00000600289 VPS37CA5D8V6 355 aaPredicted RBP18.04■□□□□ 0.48
LSM4-206ENST00000600289 ZBTB39O15060 712 aa18.04■□□□□ 0.48
LSM4-206ENST00000600289 DGAT1O75907 488 aa18.04■□□□□ 0.48
LSM4-206ENST00000600289 CA3P07451 260 aa18.04■□□□□ 0.48
LSM4-206ENST00000600289 DARSP14868 501 aaKnown RBP18.04■□□□□ 0.48
LSM4-206ENST00000600289 RARRES1P49788 294 aa18.04■□□□□ 0.48
LSM4-206ENST00000600289 EMC2Q15006 297 aa18.04■□□□□ 0.48
LSM4-206ENST00000600289 XKR9Q5GH70 373 aa18.04■□□□□ 0.48
LSM4-206ENST00000600289 MYOCDQ8IZQ8 938 aa18.04■□□□□ 0.48
LSM4-206ENST00000600289 CRIPAKQ8N1N5 446 aa18.04■□□□□ 0.48
LSM4-206ENST00000600289 TCP11Q8WWU5 503 aa18.04■□□□□ 0.48
LSM4-206ENST00000600289 FBXL18Q96ME1 805 aa18.04■□□□□ 0.48
LSM4-206ENST00000600289 NACC1Q96RE7 527 aa18.04■□□□□ 0.48
LSM4-206ENST00000600289 ZBED2Q9BTP6 218 aa18.04■□□□□ 0.48
LSM4-206ENST00000600289 SUCLA2Q9P2R7 463 aaPredicted RBP18.04■□□□□ 0.48
LSM4-206ENST00000600289 LRWD1Q9UFC0 647 aa18.04■□□□□ 0.48
LSM4-206ENST00000600289 ST3GAL5Q9UNP4 418 aa18.04■□□□□ 0.48
LSM4-206ENST00000600289 GINS2Q9Y248 185 aa18.04■□□□□ 0.48
LSM4-206ENST00000600289 INSL6Q9Y581 213 aa18.04■□□□□ 0.48
LSM4-206ENST00000600289 TRIOO75962 3097 aa18.03■□□□□ 0.48
LSM4-206ENST00000600289 EPOPA6NHQ4 379 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms