RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 RGL1Q9NZL6 768 aa16.37■□□□□ 0.21
XRCC1-208ENST00000598422 MAFO75444 373 aaPredicted RBP16.36■□□□□ 0.21
XRCC1-208ENST00000598422 RB1P06400 928 aa16.36■□□□□ 0.21
XRCC1-208ENST00000598422 BMPR1AP36894 532 aa16.36■□□□□ 0.21
XRCC1-208ENST00000598422 RFC5P40937 340 aa16.36■□□□□ 0.21
XRCC1-208ENST00000598422 TXKP42681 527 aa16.36■□□□□ 0.21
XRCC1-208ENST00000598422 NPEPPSP55786 919 aa16.36■□□□□ 0.21
XRCC1-208ENST00000598422 SPIRE1Q08AE8 756 aa16.36■□□□□ 0.21
XRCC1-208ENST00000598422 CTTNQ14247 550 aaKnown RBP16.36■□□□□ 0.21
XRCC1-208ENST00000598422 RHPN2Q8IUC4 686 aa16.36■□□□□ 0.21
XRCC1-208ENST00000598422 TPH2Q8IWU9 490 aa16.36■□□□□ 0.21
XRCC1-208ENST00000598422 FBXO18Q8NFZ0 1043 aa16.36■□□□□ 0.21
XRCC1-208ENST00000598422 NEK9Q8TD19 979 aa16.36■□□□□ 0.21
XRCC1-208ENST00000598422 NLRP4Q96MN2 994 aa16.36■□□□□ 0.21
XRCC1-208ENST00000598422 WRAP73Q9P2S5 460 aaPredicted RBP16.36■□□□□ 0.21
XRCC1-208ENST00000598422 NOL7Q9UMY1 257 aaKnown RBP16.36■□□□□ 0.21
XRCC1-208ENST00000598422 COG5Q9UP83 839 aa16.36■□□□□ 0.21
XRCC1-208ENST00000598422 MRPL42Q9Y6G3 142 aaKnown RBP16.36■□□□□ 0.21
XRCC1-208ENST00000598422 PTPRSQ13332 1948 aa16.36■□□□□ 0.21
XRCC1-208ENST00000598422 CHD7Q9P2D1 2997 aa16.36■□□□□ 0.21
XRCC1-208ENST00000598422 IGKV6-21A0A0C4DH24 114 aa16.35■□□□□ 0.21
XRCC1-208ENST00000598422 C9IYK1 514 aa16.35■□□□□ 0.21
XRCC1-208ENST00000598422 WNT7AO00755 349 aa16.35■□□□□ 0.21
XRCC1-208ENST00000598422 SFPQP23246 707 aaKnown RBP eCLIP16.35■□□□□ 0.21
XRCC1-208ENST00000598422 XKR9Q5GH70 373 aa16.35■□□□□ 0.21
XRCC1-208ENST00000598422 SPOUT1Q5T280 376 aaKnown RBP16.35■□□□□ 0.21
XRCC1-208ENST00000598422 ZNF410Q86VK4 478 aa16.35■□□□□ 0.21
XRCC1-208ENST00000598422 PSPC1Q8WXF1 523 aaKnown RBP16.35■□□□□ 0.21
XRCC1-208ENST00000598422 CLP1Q92989 425 aaKnown RBP16.35■□□□□ 0.21
XRCC1-208ENST00000598422 HLA-CQ95604 372 aa16.35■□□□□ 0.21
XRCC1-208ENST00000598422 CEP89Q96ST8 783 aa16.35■□□□□ 0.21
XRCC1-208ENST00000598422 EIF2AK1Q9BQI3 630 aaKnown RBP16.35■□□□□ 0.21
XRCC1-208ENST00000598422 PLVAPQ9BX97 442 aa16.35■□□□□ 0.21
XRCC1-208ENST00000598422 INO80BQ9C086 356 aaPredicted RBP16.35■□□□□ 0.21
XRCC1-208ENST00000598422 BMP2KQ9NSY1 1161 aaPredicted RBP16.35■□□□□ 0.21
XRCC1-208ENST00000598422 TMEM161AQ9NX61 479 aa16.35■□□□□ 0.21
XRCC1-208ENST00000598422 EYSQ5T1H1 3165 aa16.35■□□□□ 0.21
XRCC1-208ENST00000598422 SIP14410 1827 aa16.34■□□□□ 0.21
XRCC1-208ENST00000598422 TBKBP1A7MCY6 615 aa16.34■□□□□ 0.21
XRCC1-208ENST00000598422 C5orf67F2Z3F1 127 aa16.34■□□□□ 0.21
XRCC1-208ENST00000598422 HOXA2O43364 376 aa16.34■□□□□ 0.21
XRCC1-208ENST00000598422 GAS2O43903 313 aaKnown RBP16.34■□□□□ 0.21
XRCC1-208ENST00000598422 MCM2P49736 904 aa16.34■□□□□ 0.21
XRCC1-208ENST00000598422 GATMP50440 423 aa16.34■□□□□ 0.21
XRCC1-208ENST00000598422 TFF2Q03403 129 aa16.34■□□□□ 0.21
XRCC1-208ENST00000598422 ORC2Q13416 577 aaPredicted RBP16.34■□□□□ 0.21
XRCC1-208ENST00000598422 NOSTRINQ8IVI9 506 aa16.34■□□□□ 0.21
XRCC1-208ENST00000598422 ABI1Q8IZP0 508 aa16.34■□□□□ 0.21
XRCC1-208ENST00000598422 CRIPAKQ8N1N5 446 aa16.34■□□□□ 0.21
XRCC1-208ENST00000598422 RNF169Q8NCN4 708 aa16.34■□□□□ 0.21
XRCC1-208ENST00000598422 TCP11Q8WWU5 503 aa16.34■□□□□ 0.21
XRCC1-208ENST00000598422 LMAN2LQ9H0V9 348 aa16.34■□□□□ 0.21
XRCC1-208ENST00000598422 DACT1Q9NYF0 836 aa16.34■□□□□ 0.21
XRCC1-208ENST00000598422 COL4A3BPQ9Y5P4 624 aa16.34■□□□□ 0.21
XRCC1-208ENST00000598422 COL4A4P53420 1690 aaPredicted RBP16.34■□□□□ 0.21
XRCC1-208ENST00000598422 A0A087WZ62 844 aa16.33■□□□□ 0.2
XRCC1-208ENST00000598422 CSDE1O75534 798 aaKnown RBP16.33■□□□□ 0.2
XRCC1-208ENST00000598422 CSPG5O95196 566 aa16.33■□□□□ 0.2
XRCC1-208ENST00000598422 OR52Z1P0C646 297 aa16.33■□□□□ 0.2
XRCC1-208ENST00000598422 FGFR4P22455 802 aa16.33■□□□□ 0.2
XRCC1-208ENST00000598422 TRAPPC10P48553 1259 aa16.33■□□□□ 0.2
XRCC1-208ENST00000598422 DSC3Q14574 896 aa16.33■□□□□ 0.2
XRCC1-208ENST00000598422 EMC2Q15006 297 aa16.33■□□□□ 0.2
XRCC1-208ENST00000598422 ZNF174Q15697 407 aa16.33■□□□□ 0.2
XRCC1-208ENST00000598422 TTC38Q5R3I4 469 aa16.33■□□□□ 0.2
XRCC1-208ENST00000598422 TMEM143Q96AN5 459 aa16.33■□□□□ 0.2
XRCC1-208ENST00000598422 MTMR9Q96QG7 549 aa16.33■□□□□ 0.2
XRCC1-208ENST00000598422 FDXACB1Q9BRP7 624 aaPredicted RBP16.33■□□□□ 0.2
XRCC1-208ENST00000598422 DHX33Q9H6R0 707 aaKnown RBP16.33■□□□□ 0.2
XRCC1-208ENST00000598422 ELAC1Q9H777 363 aaKnown RBP16.33■□□□□ 0.2
XRCC1-208ENST00000598422 AAASQ9NRG9 546 aa16.33■□□□□ 0.2
XRCC1-208ENST00000598422 POTEMA6NI47 508 aa16.32■□□□□ 0.2
XRCC1-208ENST00000598422 SLITRK3O94933 977 aa16.32■□□□□ 0.2
XRCC1-208ENST00000598422 LINC00271P0C7V0 271 aa16.32■□□□□ 0.2
XRCC1-208ENST00000598422 FGFR1P11362 822 aa16.32■□□□□ 0.2
XRCC1-208ENST00000598422 FAM189BP81408 668 aa16.32■□□□□ 0.2
XRCC1-208ENST00000598422 MYO9BQ13459 2157 aa16.32■□□□□ 0.2
XRCC1-208ENST00000598422 FAM102BQ5T8I3 360 aa16.32■□□□□ 0.2
XRCC1-208ENST00000598422 CATSPER4Q7RTX7 472 aa16.32■□□□□ 0.2
XRCC1-208ENST00000598422 KSR1Q8IVT5 923 aa16.32■□□□□ 0.2
XRCC1-208ENST00000598422 UNC80Q8N2C7 3258 aa16.32■□□□□ 0.2
XRCC1-208ENST00000598422 ZNF579Q8NAF0 562 aaKnown RBP16.32■□□□□ 0.2
XRCC1-208ENST00000598422 ERMNQ8TAM6 284 aa16.32■□□□□ 0.2
XRCC1-208ENST00000598422 TMX3Q96JJ7 454 aa16.32■□□□□ 0.2
XRCC1-208ENST00000598422 TBC1D32Q96NH3 1257 aa16.32■□□□□ 0.2
XRCC1-208ENST00000598422 MTRQ99707 1265 aa16.32■□□□□ 0.2
XRCC1-208ENST00000598422 TMEM60Q9H2L4 133 aa16.32■□□□□ 0.2
XRCC1-208ENST00000598422 NSUN3Q9H649 340 aaKnown RBP16.32■□□□□ 0.2
XRCC1-208ENST00000598422 PIN4Q9Y237 131 aaKnown RBP16.32■□□□□ 0.2
XRCC1-208ENST00000598422 GRM6O15303 877 aa16.31■□□□□ 0.2
XRCC1-208ENST00000598422 LYPLA2O95372 231 aa16.31■□□□□ 0.2
XRCC1-208ENST00000598422 NAALADL2Q58DX5 795 aa16.31■□□□□ 0.2
XRCC1-208ENST00000598422 TWF2Q6IBS0 349 aaKnown RBP16.31■□□□□ 0.2
XRCC1-208ENST00000598422 ECHDC2Q86YB7 292 aa16.31■□□□□ 0.2
XRCC1-208ENST00000598422 ADAMTS19Q8TE59 1207 aa16.31■□□□□ 0.2
XRCC1-208ENST00000598422 PRPF31Q8WWY3 499 aaKnown RBP16.31■□□□□ 0.2
XRCC1-208ENST00000598422 HSD17B14Q9BPX1 270 aa16.31■□□□□ 0.2
XRCC1-208ENST00000598422 TMEM117Q9H0C3 514 aa16.31■□□□□ 0.2
XRCC1-208ENST00000598422 UBE2ZQ9H832 354 aaPredicted RBP16.31■□□□□ 0.2
XRCC1-208ENST00000598422 CHST12Q9NRB3 414 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms