RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 CACNA2D4Q7Z3S7 1137 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 NCAPG2Q86XI2 1143 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 CCDC170Q8IYT3 715 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 SLC35C1Q96A29 364 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 CDHR1Q96JP9 859 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 EDEM3Q9BZQ6 932 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 DMAC2Q9NW81 257 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 CEP72Q9P209 647 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 SLC9A2Q9UBY0 812 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 ZNF263O14978 683 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 CYLC1P35663 651 aaPredicted RBP18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 ALDH5A1P51649 535 aaPredicted RBP18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 INHBEP58166 350 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 ACTR2P61160 394 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 POLR2FP61218 127 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 STXBP2Q15833 593 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 GNPTABQ3T906 1256 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 ZNF569Q5MCW4 686 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 SWSAP1Q6NVH7 229 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 SMAP1Q8IYB5 467 aaPredicted RBP18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 BRI3BPQ8WY22 251 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 METTL14Q9HCE5 456 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 FBXO40Q9UH90 709 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 AGTPBP1Q9UPW5 1226 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 V9GYY5 206 aaPredicted RBP18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 PFASO15067 1338 aa18.68■□□□□ 0.58
SHKBP1-216ENST00000598201 RCCD1A6NED2 376 aa18.68■□□□□ 0.58
SHKBP1-216ENST00000598201 SOWAHBA6NEL2 793 aa18.68■□□□□ 0.58
SHKBP1-216ENST00000598201 EIF3CLB5ME19 914 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-216ENST00000598201 ACTN1P12814 892 aa18.68■□□□□ 0.58
SHKBP1-216ENST00000598201 MAP2K2P36507 400 aa18.68■□□□□ 0.58
SHKBP1-216ENST00000598201 CYP2J2P51589 502 aa18.68■□□□□ 0.58
SHKBP1-216ENST00000598201 CYP27A1Q02318 531 aa18.68■□□□□ 0.58
SHKBP1-216ENST00000598201 TCERG1LQ5VWI1 586 aa18.68■□□□□ 0.58
SHKBP1-216ENST00000598201 HS2ST1Q7LGA3 356 aa18.68■□□□□ 0.58
SHKBP1-216ENST00000598201 CCDC60Q8IWA6 550 aaPredicted RBP18.68■□□□□ 0.58
SHKBP1-216ENST00000598201 FAM186BQ8IYM0 893 aa18.68■□□□□ 0.58
SHKBP1-216ENST00000598201 EIF3CQ99613 913 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-216ENST00000598201 GANQ9H2C0 597 aa18.68■□□□□ 0.58
SHKBP1-216ENST00000598201 TXNRD2Q9NNW7 524 aa18.68■□□□□ 0.58
SHKBP1-216ENST00000598201 TISP43B9A030 160 aa18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 EIF3JO75822 258 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 MAPTP10636 758 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 SLC9A1P19634 815 aa18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 PSMC2P35998 433 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 PPP2R3AQ06190 1150 aa18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 SREBF2Q12772 1141 aa18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 ABHD15Q6UXT9 468 aa18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 SYCP3Q8IZU3 236 aa18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 SLC35F6Q8N357 371 aa18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 ERO1AQ96HE7 468 aa18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 TLR2O60603 784 aa18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 PSAPP07602 524 aa18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 EIF4A3P38919 411 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 PEX3P56589 373 aa18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 KRT83P78385 493 aa18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 FAM102BQ5T8I3 360 aa18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 SEPT14Q6ZU15 432 aa18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 CCDC42Q96M95 316 aa18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 DRC1Q96MC2 740 aa18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 PTPN18Q99952 460 aa18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 CEP350Q5VT06 3117 aa18.67■□□□□ 0.58
SHKBP1-216ENST00000598201 WDR81Q562E7 1941 aa18.66■□□□□ 0.58
SHKBP1-216ENST00000598201 SLC16A4O15374 487 aa18.66■□□□□ 0.58
SHKBP1-216ENST00000598201 RRP9O43818 475 aaKnown RBP18.66■□□□□ 0.58
SHKBP1-216ENST00000598201 ICAM3P32942 547 aa18.66■□□□□ 0.58
SHKBP1-216ENST00000598201 TM4SF4P48230 202 aa18.66■□□□□ 0.58
SHKBP1-216ENST00000598201 SOX10P56693 466 aa18.66■□□□□ 0.58
SHKBP1-216ENST00000598201 HGSNATQ68CP4 663 aa18.66■□□□□ 0.58
SHKBP1-216ENST00000598201 CYFIP1Q7L576 1253 aa18.66■□□□□ 0.58
SHKBP1-216ENST00000598201 ANKRD7Q92527 254 aa18.66■□□□□ 0.58
SHKBP1-216ENST00000598201 ATP6V0A1Q93050 837 aa18.66■□□□□ 0.58
SHKBP1-216ENST00000598201 TIPINQ9BVW5 301 aa18.66■□□□□ 0.58
SHKBP1-216ENST00000598201 LACRTQ9GZZ8 138 aa18.66■□□□□ 0.58
SHKBP1-216ENST00000598201 RBPJLQ9UBG7 517 aa18.66■□□□□ 0.58
SHKBP1-216ENST00000598201 GUCA1BQ9UMX6 200 aa18.66■□□□□ 0.58
SHKBP1-216ENST00000598201 POTEB2H3BUK9 544 aa18.65■□□□□ 0.58
SHKBP1-216ENST00000598201 PON1P27169 355 aa18.65■□□□□ 0.58
SHKBP1-216ENST00000598201 Q3C1V9 767 aa18.65■□□□□ 0.58
SHKBP1-216ENST00000598201 GPAT2Q6NUI2 795 aa18.65■□□□□ 0.58
SHKBP1-216ENST00000598201 HAUS6Q7Z4H7 955 aa18.65■□□□□ 0.58
SHKBP1-216ENST00000598201 REM2Q8IYK8 340 aaPredicted RBP18.65■□□□□ 0.58
SHKBP1-216ENST00000598201 DNAJC5GQ8N7S2 189 aa18.65■□□□□ 0.58
SHKBP1-216ENST00000598201 CEP170P1Q96L14 293 aa18.65■□□□□ 0.58
SHKBP1-216ENST00000598201 MKNK1Q9BUB5 465 aa18.65■□□□□ 0.58
SHKBP1-216ENST00000598201 BTBD19C9JJ37 291 aa18.65■□□□□ 0.58
SHKBP1-216ENST00000598201 EDNRBP24530 442 aa18.65■□□□□ 0.58
SHKBP1-216ENST00000598201 KIF11P52732 1056 aa18.65■□□□□ 0.58
SHKBP1-216ENST00000598201 GTF2BQ00403 316 aa18.65■□□□□ 0.58
SHKBP1-216ENST00000598201 PRKCEQ02156 737 aa18.65■□□□□ 0.58
SHKBP1-216ENST00000598201 EXOC3L4Q17RC7 722 aa18.65■□□□□ 0.58
SHKBP1-216ENST00000598201 KIAA1328Q86T90 577 aa18.65■□□□□ 0.58
SHKBP1-216ENST00000598201 FAM133AQ8N9E0 248 aa18.65■□□□□ 0.58
SHKBP1-216ENST00000598201 HAUS4Q9H6D7 363 aa18.65■□□□□ 0.58
SHKBP1-216ENST00000598201 MRFAP1Q9Y605 127 aa18.65■□□□□ 0.58
SHKBP1-216ENST00000598201 PCNTO95613 3336 aa18.65■□□□□ 0.58
SHKBP1-216ENST00000598201 SUPT20HL2P0C7V6 817 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 NCKAP1LP55160 1127 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 ALCAMQ13740 583 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms