RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 CTTNQ14247 550 aaKnown RBP16.77■□□□□ 0.28
PNKP-204ENST00000594661 FAM26FQ5R3K3 315 aa16.77■□□□□ 0.28
PNKP-204ENST00000594661 C6orf89Q6UWU4 347 aa16.77■□□□□ 0.28
PNKP-204ENST00000594661 TRAPPC11Q7Z392 1133 aa16.77■□□□□ 0.28
PNKP-204ENST00000594661 SULF1Q8IWU6 871 aa16.77■□□□□ 0.28
PNKP-204ENST00000594661 FUKQ8N0W3 1084 aa16.77■□□□□ 0.28
PNKP-204ENST00000594661 SYT2Q8N9I0 419 aaPredicted RBP16.77■□□□□ 0.28
PNKP-204ENST00000594661 DYDC2Q96IM9 177 aa16.77■□□□□ 0.28
PNKP-204ENST00000594661 PURBQ96QR8 312 aaKnown RBP16.77■□□□□ 0.28
PNKP-204ENST00000594661 UNC45AQ9H3U1 944 aa16.77■□□□□ 0.28
PNKP-204ENST00000594661 RNF146Q9NTX7 359 aa16.77■□□□□ 0.28
PNKP-204ENST00000594661 TBC1D7Q9P0N9 293 aa16.77■□□□□ 0.28
PNKP-204ENST00000594661 TPX2Q9ULW0 747 aaKnown RBP16.77■□□□□ 0.28
PNKP-204ENST00000594661 ADAMTS5Q9UNA0 930 aa16.77■□□□□ 0.28
PNKP-204ENST00000594661 RABGAP1Q9Y3P9 1069 aa16.77■□□□□ 0.28
PNKP-204ENST00000594661 FRMPD4Q14CM0 1322 aa16.77■□□□□ 0.27
PNKP-204ENST00000594661 GOLGA6L7A0A1B0GV03 622 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 SRRM3A6NNA2 597 aaPredicted RBP16.76■□□□□ 0.27
PNKP-204ENST00000594661 IPO5O00410 1097 aaKnown RBP16.76■□□□□ 0.27
PNKP-204ENST00000594661 EIF2AK2P19525 551 aaKnown RBP16.76■□□□□ 0.27
PNKP-204ENST00000594661 MRPS9P82933 396 aaKnown RBP16.76■□□□□ 0.27
PNKP-204ENST00000594661 IFFO1Q0D2I5 559 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 EMC10Q5UCC4 262 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 NSMFQ6X4W1 530 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 CATSPERGQ6ZRH7 1159 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 SAAL1Q96ER3 474 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 NOC4LQ9BVI4 516 aaKnown RBP16.76■□□□□ 0.27
PNKP-204ENST00000594661 WDR11Q9BZH6 1224 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 CENPHQ9H3R5 247 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 TMOD4Q9NZQ9 345 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 PKD2L1Q9P0L9 805 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 ZNF214Q9UL59 606 aaPredicted RBP16.76■□□□□ 0.27
PNKP-204ENST00000594661 FAM184BQ9ULE4 1060 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 LUC7L2Q9Y383 392 aaKnown RBP16.76■□□□□ 0.27
PNKP-204ENST00000594661 PCDHA2Q9Y5H9 948 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 SLITRK3O94933 977 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 KRT18P05783 430 aaKnown RBP16.76■□□□□ 0.27
PNKP-204ENST00000594661 GBP2P32456 591 aaPredicted RBP16.76■□□□□ 0.27
PNKP-204ENST00000594661 COG2Q14746 738 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 PDCD2Q16342 344 aaPredicted RBP16.76■□□□□ 0.27
PNKP-204ENST00000594661 PCNX4Q63HM2 1172 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 SNRNP48Q6IEG0 339 aaKnown RBP16.76■□□□□ 0.27
PNKP-204ENST00000594661 B3GNT9Q6UX72 402 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 RNF207Q6ZRF8 634 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 CCDC65Q8IXS2 484 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 ACRBPQ8NEB7 543 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 OR8K1Q8NGG5 319 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 PARD3BQ8TEW8 1205 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 LMBR1Q8WVP7 490 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 TCP11Q8WWU5 503 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 RSRC1Q96IZ7 334 aaKnown RBP16.76■□□□□ 0.27
PNKP-204ENST00000594661 BHMT2Q9H2M3 363 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 KCNH7Q9NS40 1196 aa16.76■□□□□ 0.27
PNKP-204ENST00000594661 MAP3K20Q9NYL2 800 aaKnown RBP16.76■□□□□ 0.27
PNKP-204ENST00000594661 NKRFO15226 690 aaKnown RBP eCLIP16.75■□□□□ 0.27
PNKP-204ENST00000594661 SKAP2O75563 359 aaPredicted RBP16.75■□□□□ 0.27
PNKP-204ENST00000594661 AP1G2O75843 785 aa16.75■□□□□ 0.27
PNKP-204ENST00000594661 PDCLQ13371 301 aa16.75■□□□□ 0.27
PNKP-204ENST00000594661 GIT2Q14161 759 aa16.75■□□□□ 0.27
PNKP-204ENST00000594661 TMEM132BQ14DG7 1078 aa16.75■□□□□ 0.27
PNKP-204ENST00000594661 PGM5Q15124 567 aa16.75■□□□□ 0.27
PNKP-204ENST00000594661 KRT26Q7Z3Y9 468 aa16.75■□□□□ 0.27
PNKP-204ENST00000594661 ZNF473Q8WTR7 871 aaKnown RBP16.75■□□□□ 0.27
PNKP-204ENST00000594661 SPDL1Q96EA4 605 aa16.75■□□□□ 0.27
PNKP-204ENST00000594661 TEKT3Q9BXF9 490 aa16.75■□□□□ 0.27
PNKP-204ENST00000594661 TUFT1Q9NNX1 390 aa16.75■□□□□ 0.27
PNKP-204ENST00000594661 PNMA2Q9UL42 364 aa16.75■□□□□ 0.27
PNKP-204ENST00000594661 UBIAD1Q9Y5Z9 338 aa16.75■□□□□ 0.27
PNKP-204ENST00000594661 DDX39AO00148 427 aaKnown RBP16.75■□□□□ 0.27
PNKP-204ENST00000594661 EYA4O95677 639 aa16.75■□□□□ 0.27
PNKP-204ENST00000594661 BCRP11274 1271 aa16.75■□□□□ 0.27
PNKP-204ENST00000594661 TKFCQ3LXA3 575 aa16.75■□□□□ 0.27
PNKP-204ENST00000594661 HERC4Q5GLZ8 1057 aaPredicted RBP16.75■□□□□ 0.27
PNKP-204ENST00000594661 RNF187Q5TA31 235 aaPredicted RBP16.75■□□□□ 0.27
PNKP-204ENST00000594661 TPH2Q8IWU9 490 aa16.75■□□□□ 0.27
PNKP-204ENST00000594661 MYOCDQ8IZQ8 938 aa16.75■□□□□ 0.27
PNKP-204ENST00000594661 PIGOQ8TEQ8 1089 aa16.75■□□□□ 0.27
PNKP-204ENST00000594661 REEP2Q9BRK0 252 aa16.75■□□□□ 0.27
PNKP-204ENST00000594661 RUSC1Q9BVN2 902 aa16.75■□□□□ 0.27
PNKP-204ENST00000594661 WRAP73Q9P2S5 460 aaPredicted RBP16.75■□□□□ 0.27
PNKP-204ENST00000594661 CAPN11Q9UMQ6 739 aa16.75■□□□□ 0.27
PNKP-204ENST00000594661 PTPRFP10586 1907 aa16.74■□□□□ 0.27
PNKP-204ENST00000594661 TRIM21P19474 475 aaKnown RBP16.74■□□□□ 0.27
PNKP-204ENST00000594661 HOXA7P31268 230 aaPredicted RBP16.74■□□□□ 0.27
PNKP-204ENST00000594661 BAATQ14032 418 aaPredicted RBP16.74■□□□□ 0.27
PNKP-204ENST00000594661 TSR1Q2NL82 804 aaKnown RBP16.74■□□□□ 0.27
PNKP-204ENST00000594661 SH3D19Q5HYK7 790 aa16.74■□□□□ 0.27
PNKP-204ENST00000594661 MIIPQ5JXC2 388 aa16.74■□□□□ 0.27
PNKP-204ENST00000594661 NIPA1Q7RTP0 329 aa16.74■□□□□ 0.27
PNKP-204ENST00000594661 SAMD3Q8N6K7 520 aa16.74■□□□□ 0.27
PNKP-204ENST00000594661 RUBCNQ92622 972 aa16.74■□□□□ 0.27
PNKP-204ENST00000594661 PCMTD1Q96MG8 357 aaPredicted RBP16.74■□□□□ 0.27
PNKP-204ENST00000594661 RMDN3Q96TC7 470 aa16.74■□□□□ 0.27
PNKP-204ENST00000594661 RIT2Q99578 217 aa16.74■□□□□ 0.27
PNKP-204ENST00000594661 CHP1Q99653 195 aa16.74■□□□□ 0.27
PNKP-204ENST00000594661 ZHX3Q9H4I2 956 aa16.74■□□□□ 0.27
PNKP-204ENST00000594661 PXMP2Q9NR77 195 aa16.74■□□□□ 0.27
PNKP-204ENST00000594661 IRAK4Q9NWZ3 460 aa16.74■□□□□ 0.27
PNKP-204ENST00000594661 SPDYE16A6NNV3 312 aaPredicted RBP16.73■□□□□ 0.27
PNKP-204ENST00000594661 ZBTB39O15060 712 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms