RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 NT5C1B-RDH14C9J2C7 533 aa13.7□□□□□ -0.22
ZNF558-202ENST00000593891 HYAL3O43820 417 aaPredicted RBP13.7□□□□□ -0.22
ZNF558-202ENST00000593891 RPS6KA5O75582 802 aa13.7□□□□□ -0.22
ZNF558-202ENST00000593891 PRB1P04280 392 aa13.7□□□□□ -0.22
ZNF558-202ENST00000593891 CHGBP05060 677 aa13.7□□□□□ -0.22
ZNF558-202ENST00000593891 APPP05067 770 aa13.7□□□□□ -0.22
ZNF558-202ENST00000593891 FNTBP49356 437 aa13.7□□□□□ -0.22
ZNF558-202ENST00000593891 MARCH8Q5T0T0 291 aa13.7□□□□□ -0.22
ZNF558-202ENST00000593891 KIAA1211LQ6NV74 962 aa13.7□□□□□ -0.22
ZNF558-202ENST00000593891 CYFIP1Q7L576 1253 aa13.7□□□□□ -0.22
ZNF558-202ENST00000593891 GET4Q7L5D6 327 aaPredicted RBP13.7□□□□□ -0.22
ZNF558-202ENST00000593891 VSIG10LQ86VR7 867 aa13.7□□□□□ -0.22
ZNF558-202ENST00000593891 LONP2Q86WA8 852 aa13.7□□□□□ -0.22
ZNF558-202ENST00000593891 ERC1Q8IUD2 1116 aa13.7□□□□□ -0.22
ZNF558-202ENST00000593891 HNRNPLLQ8WVV9 542 aaKnown RBP13.7□□□□□ -0.22
ZNF558-202ENST00000593891 SMG7Q92540 1137 aaKnown RBP13.7□□□□□ -0.22
ZNF558-202ENST00000593891 PDCD2LQ9BRP1 358 aa13.7□□□□□ -0.22
ZNF558-202ENST00000593891 CHRDQ9H2X0 955 aa13.7□□□□□ -0.22
ZNF558-202ENST00000593891 PIDD1Q9HB75 910 aa13.7□□□□□ -0.22
ZNF558-202ENST00000593891 IL17RBQ9NRM6 502 aa13.7□□□□□ -0.22
ZNF558-202ENST00000593891 SPTA1P02549 2419 aa13.7□□□□□ -0.22
ZNF558-202ENST00000593891 ZNF462Q96JM2 2506 aa13.69□□□□□ -0.22
ZNF558-202ENST00000593891 WDFY3Q8IZQ1 3526 aa13.69□□□□□ -0.22
ZNF558-202ENST00000593891 TK2O00142 265 aa13.69□□□□□ -0.22
ZNF558-202ENST00000593891 INPPL1O15357 1258 aa13.69□□□□□ -0.22
ZNF558-202ENST00000593891 NMT2O60551 498 aa13.69□□□□□ -0.22
ZNF558-202ENST00000593891 CSRP1P21291 193 aaKnown RBP13.69□□□□□ -0.22
ZNF558-202ENST00000593891 CXCL12P48061 93 aa13.69□□□□□ -0.22
ZNF558-202ENST00000593891 IGBP1P78318 339 aa13.69□□□□□ -0.22
ZNF558-202ENST00000593891 KRT76Q01546 638 aa13.69□□□□□ -0.22
ZNF558-202ENST00000593891 FZD5Q13467 585 aa13.69□□□□□ -0.22
ZNF558-202ENST00000593891 CCDC184Q52MB2 194 aa13.69□□□□□ -0.22
ZNF558-202ENST00000593891 MTSS1LQ765P7 747 aa13.69□□□□□ -0.22
ZNF558-202ENST00000593891 DDX53Q86TM3 631 aaKnown RBP13.69□□□□□ -0.22
ZNF558-202ENST00000593891 GPKOWQ92917 476 aaPredicted RBP eCLIP13.69□□□□□ -0.22
ZNF558-202ENST00000593891 MAN1C1Q9NR34 630 aa13.69□□□□□ -0.22
ZNF558-202ENST00000593891 KLK13Q9UKR3 277 aa13.69□□□□□ -0.22
ZNF558-202ENST00000593891 MRPL11Q9Y3B7 192 aaKnown RBP13.69□□□□□ -0.22
ZNF558-202ENST00000593891 KDM3AQ9Y4C1 1321 aa13.68□□□□□ -0.22
ZNF558-202ENST00000593891 CARNS1A5YM72 827 aa13.68□□□□□ -0.22
ZNF558-202ENST00000593891 RRN3P2A6NIE6 340 aa13.68□□□□□ -0.22
ZNF558-202ENST00000593891 C4orf47A7E2U8 309 aa13.68□□□□□ -0.22
ZNF558-202ENST00000593891 J3QKU1 62 aa13.68□□□□□ -0.22
ZNF558-202ENST00000593891 GPR182O15218 404 aa13.68□□□□□ -0.22
ZNF558-202ENST00000593891 LILRB3O75022 631 aa13.68□□□□□ -0.22
ZNF558-202ENST00000593891 BCAR1P56945 870 aa13.68□□□□□ -0.22
ZNF558-202ENST00000593891 GNPTABQ3T906 1256 aa13.68□□□□□ -0.22
ZNF558-202ENST00000593891 PARM1Q6UWI2 310 aa13.68□□□□□ -0.22
ZNF558-202ENST00000593891 NME8Q8N427 588 aa13.68□□□□□ -0.22
ZNF558-202ENST00000593891 FGF14Q92915 247 aa13.68□□□□□ -0.22
ZNF558-202ENST00000593891 ST3GAL5Q9UNP4 418 aa13.68□□□□□ -0.22
ZNF558-202ENST00000593891 PCDHA1Q9Y5I3 950 aa13.68□□□□□ -0.22
ZNF558-202ENST00000593891 KIAA1217Q5T5P2 1943 aa13.68□□□□□ -0.22
ZNF558-202ENST00000593891 LAMA5O15230 3695 aa13.67□□□□□ -0.22
ZNF558-202ENST00000593891 EPN2O95208 641 aa13.67□□□□□ -0.22
ZNF558-202ENST00000593891 CFBP00751 764 aa13.67□□□□□ -0.22
ZNF558-202ENST00000593891 GNAT2P19087 354 aa13.67□□□□□ -0.22
ZNF558-202ENST00000593891 CCND2P30279 289 aa13.67□□□□□ -0.22
ZNF558-202ENST00000593891 TMEFF1Q8IYR6 380 aa13.67□□□□□ -0.22
ZNF558-202ENST00000593891 UBL7Q96S82 380 aaPredicted RBP13.67□□□□□ -0.22
ZNF558-202ENST00000593891 EDEM2Q9BV94 578 aa13.67□□□□□ -0.22
ZNF558-202ENST00000593891 VPS45Q9NRW7 570 aa13.67□□□□□ -0.22
ZNF558-202ENST00000593891 ERAP1Q9NZ08 941 aa13.67□□□□□ -0.22
ZNF558-202ENST00000593891 GINS2Q9Y248 185 aa13.67□□□□□ -0.22
ZNF558-202ENST00000593891 FNDC1Q4ZHG4 1894 aaPredicted RBP13.66□□□□□ -0.22
ZNF558-202ENST00000593891 CAPNS1P04632 268 aa13.66□□□□□ -0.22
ZNF558-202ENST00000593891 CNPP09543 421 aaKnown RBP13.66□□□□□ -0.22
ZNF558-202ENST00000593891 TOP1P11387 765 aaKnown RBP13.66□□□□□ -0.22
ZNF558-202ENST00000593891 MARK3P27448 753 aa13.66□□□□□ -0.22
ZNF558-202ENST00000593891 RDXP35241 583 aaKnown RBP13.66□□□□□ -0.22
ZNF558-202ENST00000593891 SP4Q02446 784 aa13.66□□□□□ -0.22
ZNF558-202ENST00000593891 PGM5Q15124 567 aa13.66□□□□□ -0.22
ZNF558-202ENST00000593891 SLC39A7Q92504 469 aa13.66□□□□□ -0.22
ZNF558-202ENST00000593891 ARHGAP45Q92619 1136 aa13.66□□□□□ -0.22
ZNF558-202ENST00000593891 MRPL9Q9BYD2 267 aaKnown RBP13.66□□□□□ -0.22
ZNF558-202ENST00000593891 NACAP1Q9BZK3 213 aa13.66□□□□□ -0.22
ZNF558-202ENST00000593891 BOLA2Q9H3K6 86 aa13.66□□□□□ -0.22
ZNF558-202ENST00000593891 EPB41L4AQ9HCS5 686 aaPredicted RBP13.66□□□□□ -0.22
ZNF558-202ENST00000593891 IL1RAPL2Q9NP60 686 aa13.66□□□□□ -0.22
ZNF558-202ENST00000593891 NDRG2Q9UN36 371 aaKnown RBP13.66□□□□□ -0.22
ZNF558-202ENST00000593891 NOC2LQ9Y3T9 749 aaKnown RBP13.66□□□□□ -0.22
ZNF558-202ENST00000593891 PCDHGA5Q9Y5G8 931 aa13.66□□□□□ -0.22
ZNF558-202ENST00000593891 RALGAPA1Q6GYQ0 2036 aa13.66□□□□□ -0.22
ZNF558-202ENST00000593891 MAN2B1O00754 1011 aa13.65□□□□□ -0.22
ZNF558-202ENST00000593891 IFIT2P09913 472 aaKnown RBP13.65□□□□□ -0.22
ZNF558-202ENST00000593891 NOVP48745 357 aa13.65□□□□□ -0.22
ZNF558-202ENST00000593891 SATB1Q01826 763 aa13.65□□□□□ -0.22
ZNF558-202ENST00000593891 ZNF543Q08ER8 600 aa13.65□□□□□ -0.22
ZNF558-202ENST00000593891 PLA2G2CQ5R387 149 aa13.65□□□□□ -0.22
ZNF558-202ENST00000593891 HEATR6Q6AI08 1181 aaKnown RBP13.65□□□□□ -0.22
ZNF558-202ENST00000593891 TNPO1Q92973 898 aaKnown RBP13.65□□□□□ -0.22
ZNF558-202ENST00000593891 ZBTB10Q96DT7 871 aa13.65□□□□□ -0.22
ZNF558-202ENST00000593891 ZFP91Q96JP5 570 aaPredicted RBP13.65□□□□□ -0.22
ZNF558-202ENST00000593891 SCUBE2Q9NQ36 999 aa13.65□□□□□ -0.22
ZNF558-202ENST00000593891 STK39Q9UEW8 545 aa13.65□□□□□ -0.22
ZNF558-202ENST00000593891 PCDHA2Q9Y5H9 948 aa13.65□□□□□ -0.22
ZNF558-202ENST00000593891 RFPL2O75678 378 aa13.64□□□□□ -0.23
ZNF558-202ENST00000593891 C1QL1O75973 258 aa13.64□□□□□ -0.23
ZNF558-202ENST00000593891 PDHBP11177 359 aa13.64□□□□□ -0.23
ZNF558-202ENST00000593891 TCF7P36402 384 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms