RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 LPPQ93052 612 aa12.7□□□□□ -0.38
PRKCSH-220ENST00000593104 PHKBQ93100 1093 aa12.7□□□□□ -0.38
PRKCSH-220ENST00000593104 LENG9Q96B70 501 aa12.7□□□□□ -0.38
PRKCSH-220ENST00000593104 TMEM117Q9H0C3 514 aa12.7□□□□□ -0.38
PRKCSH-220ENST00000593104 POMKQ9H5K3 350 aa12.7□□□□□ -0.38
PRKCSH-220ENST00000593104 PLXNA3P51805 1871 aa12.7□□□□□ -0.38
PRKCSH-220ENST00000593104 MEIS3P2A8K0S8 358 aa12.69□□□□□ -0.38
PRKCSH-220ENST00000593104 BRD1O95696 1058 aa12.69□□□□□ -0.38
PRKCSH-220ENST00000593104 CYP3A4P08684 503 aa12.69□□□□□ -0.38
PRKCSH-220ENST00000593104 PLCB3Q01970 1234 aa12.69□□□□□ -0.38
PRKCSH-220ENST00000593104 PRKCEQ02156 737 aa12.69□□□□□ -0.38
PRKCSH-220ENST00000593104 NIPA1Q7RTP0 329 aa12.69□□□□□ -0.38
PRKCSH-220ENST00000593104 TMC7Q7Z402 723 aa12.69□□□□□ -0.38
PRKCSH-220ENST00000593104 LRRC43Q8N309 656 aa12.69□□□□□ -0.38
PRKCSH-220ENST00000593104 ZNF558Q96NG5 402 aa12.69□□□□□ -0.38
PRKCSH-220ENST00000593104 CDCA3Q99618 268 aaPredicted RBP12.69□□□□□ -0.38
PRKCSH-220ENST00000593104 ELAC1Q9H777 363 aaKnown RBP12.69□□□□□ -0.38
PRKCSH-220ENST00000593104 HCFC2Q9Y5Z7 792 aa12.69□□□□□ -0.38
PRKCSH-220ENST00000593104 PIEZO1Q92508 2521 aa12.69□□□□□ -0.38
PRKCSH-220ENST00000593104 ZDBF2Q9HCK1 2354 aa12.68□□□□□ -0.38
PRKCSH-220ENST00000593104 C2orf71A6NGG8 1288 aa12.68□□□□□ -0.38
PRKCSH-220ENST00000593104 CLASP2O75122 1294 aaKnown RBP12.68□□□□□ -0.38
PRKCSH-220ENST00000593104 PSAPP07602 524 aa12.68□□□□□ -0.38
PRKCSH-220ENST00000593104 GPC3P51654 580 aa12.68□□□□□ -0.38
PRKCSH-220ENST00000593104 RARS2Q5T160 578 aaKnown RBP12.68□□□□□ -0.38
PRKCSH-220ENST00000593104 ZNF746Q6NUN9 644 aaPredicted RBP12.68□□□□□ -0.38
PRKCSH-220ENST00000593104 TMEM184AQ6ZMB5 413 aa12.68□□□□□ -0.38
PRKCSH-220ENST00000593104 Q6ZUG5 572 aa12.68□□□□□ -0.38
PRKCSH-220ENST00000593104 ABI1Q8IZP0 508 aa12.68□□□□□ -0.38
PRKCSH-220ENST00000593104 SLC39A11Q8N1S5 342 aa12.68□□□□□ -0.38
PRKCSH-220ENST00000593104 KREMEN2Q8NCW0 462 aa12.68□□□□□ -0.38
PRKCSH-220ENST00000593104 BCL7CQ8WUZ0 217 aaPredicted RBP12.68□□□□□ -0.38
PRKCSH-220ENST00000593104 SCLT1Q96NL6 688 aa12.68□□□□□ -0.38
PRKCSH-220ENST00000593104 ZMYND12Q9H0C1 365 aa12.68□□□□□ -0.38
PRKCSH-220ENST00000593104 SPG21Q9NZD8 308 aa12.68□□□□□ -0.38
PRKCSH-220ENST00000593104 VPS54Q9P1Q0 977 aa12.68□□□□□ -0.38
PRKCSH-220ENST00000593104 PCDHA10Q9Y5I2 948 aa12.68□□□□□ -0.38
PRKCSH-220ENST00000593104 hCG_1984214I3L0E3 225 aa12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 MSH4O15457 936 aa12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 B4GALT3O60512 393 aa12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 GFRA3O60609 400 aa12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 DTNBO60941 627 aa12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 OATP04181 439 aa12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 DARSP14868 501 aaKnown RBP12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 EPCAMP16422 314 aa12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 ZSCAN20P17040 1043 aaPredicted RBP12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 EIF4BP23588 611 aaKnown RBP12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 BCAR1P56945 870 aa12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 MTERF2Q49AM1 385 aa12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 ODR4Q5SWX8 454 aa12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 ZNF598Q86UK7 904 aaKnown RBP12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 REXO1Q8N1G1 1221 aaKnown RBP12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 ZNF713Q8N859 430 aaPredicted RBP12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 NLRP7Q8WX94 980 aa12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 ATOH1Q92858 354 aaPredicted RBP12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 BRF1Q92994 677 aa12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 MAP7D2Q96T17 732 aa12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 UNC45AQ9H3U1 944 aa12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 DISC1Q9NRI5 854 aa12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 TBC1D22BQ9NU19 505 aa12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 TCEAL9Q9UHQ7 104 aa12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 PUF60Q9UHX1 559 aaKnown RBP12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 LZTS1Q9Y250 596 aa12.67□□□□□ -0.38
PRKCSH-220ENST00000593104 ZC3H11AO75152 810 aaKnown RBP eCLIP12.66□□□□□ -0.38
PRKCSH-220ENST00000593104 MYBP10242 640 aa12.66□□□□□ -0.38
PRKCSH-220ENST00000593104 FGD1P98174 961 aa12.66□□□□□ -0.38
PRKCSH-220ENST00000593104 SETQ01105 290 aaPredicted RBP12.66□□□□□ -0.38
PRKCSH-220ENST00000593104 RNF20Q5VTR2 975 aa12.66□□□□□ -0.38
PRKCSH-220ENST00000593104 PDE12Q6L8Q7 609 aaKnown RBP12.66□□□□□ -0.38
PRKCSH-220ENST00000593104 KSR1Q8IVT5 923 aa12.66□□□□□ -0.38
PRKCSH-220ENST00000593104 SMAP1Q8IYB5 467 aaPredicted RBP12.66□□□□□ -0.38
PRKCSH-220ENST00000593104 TMEM105Q8N8V8 129 aa12.66□□□□□ -0.38
PRKCSH-220ENST00000593104 MRPL43Q8N983 215 aaKnown RBP12.66□□□□□ -0.38
PRKCSH-220ENST00000593104 RIPOR3Q96MK2 946 aa12.66□□□□□ -0.38
PRKCSH-220ENST00000593104 NCOA5Q9HCD5 579 aaKnown RBP12.66□□□□□ -0.38
PRKCSH-220ENST00000593104 C6orf50Q9HD87 102 aa12.66□□□□□ -0.38
PRKCSH-220ENST00000593104 NGRNQ9NPE2 291 aaKnown RBP12.66□□□□□ -0.38
PRKCSH-220ENST00000593104 INPP5FQ9Y2H2 1132 aa12.66□□□□□ -0.38
PRKCSH-220ENST00000593104 A0A087WZ62 844 aa12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 ESYT2A0FGR8 921 aa12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 WDR64B1ANS9 1081 aa12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 MAGEB2O15479 319 aa12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 TDP2O95551 362 aa12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 CXCL14O95715 111 aa12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 SRGAP2BP0DMP2 458 aa12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 CIITAP33076 1130 aa12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 AFF1P51825 1210 aaKnown RBP12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 CCT2P78371 535 aaKnown RBP12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 KRT17Q04695 432 aa12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 SMC1AQ14683 1233 aaKnown RBP12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 VPS52Q8N1B4 723 aa12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 CASP10Q92851 521 aa12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 CCDC136Q96JN2 1154 aa12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 JAKMIP1Q96N16 626 aaKnown RBP12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 FDXACB1Q9BRP7 624 aaPredicted RBP12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 LARP6Q9BRS8 491 aaKnown RBP12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 VN1R3Q9BXE9 311 aa12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 SLC26A6Q9BXS9 759 aa12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 GBP3Q9H0R5 595 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms