RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 TMEM62Q0P6H9 643 aa8.49□□□□□ -1.05
VAT1-209ENST00000592388 NONOQ15233 471 aaKnown RBP eCLIP8.49□□□□□ -1.05
VAT1-209ENST00000592388 PTPN14Q15678 1187 aa8.49□□□□□ -1.05
VAT1-209ENST00000592388 TAF2Q6P1X5 1199 aa8.49□□□□□ -1.05
VAT1-209ENST00000592388 PRR23CQ6ZRP0 262 aa8.49□□□□□ -1.05
VAT1-209ENST00000592388 CATIPQ7Z7H3 387 aa8.49□□□□□ -1.05
VAT1-209ENST00000592388 CABP7Q86V35 215 aa8.49□□□□□ -1.05
VAT1-209ENST00000592388 VSIG10LQ86VR7 867 aa8.49□□□□□ -1.05
VAT1-209ENST00000592388 ZNF654Q8IZM8 581 aa8.49□□□□□ -1.05
VAT1-209ENST00000592388 TMEM87AQ8NBN3 555 aa8.49□□□□□ -1.05
VAT1-209ENST00000592388 ST13P5Q8NFI4 369 aaPredicted RBP8.49□□□□□ -1.05
VAT1-209ENST00000592388 IGDCC4Q8TDY8 1250 aa8.49□□□□□ -1.05
VAT1-209ENST00000592388 USP26Q9BXU7 913 aa8.49□□□□□ -1.05
VAT1-209ENST00000592388 LRRC2Q9BYS8 371 aa8.49□□□□□ -1.05
VAT1-209ENST00000592388 BCO2Q9BYV7 579 aa8.49□□□□□ -1.05
VAT1-209ENST00000592388 MAF1Q9H063 256 aa8.49□□□□□ -1.05
VAT1-209ENST00000592388 ASH1LQ9NR48 2969 aaKnown RBP8.49□□□□□ -1.05
VAT1-209ENST00000592388 SEMA4GQ9NTN9 838 aa8.49□□□□□ -1.05
VAT1-209ENST00000592388 RAB23Q9ULC3 237 aa8.49□□□□□ -1.05
VAT1-209ENST00000592388 NAV2Q8IVL1 2488 aa8.49□□□□□ -1.05
VAT1-209ENST00000592388 UNC79Q9P2D8 2635 aa8.48□□□□□ -1.05
VAT1-209ENST00000592388 PNMA6FA0A0J9YX94 578 aa8.48□□□□□ -1.05
VAT1-209ENST00000592388 SH2B2O14492 632 aaPredicted RBP8.48□□□□□ -1.05
VAT1-209ENST00000592388 PRC1O43663 620 aa8.48□□□□□ -1.05
VAT1-209ENST00000592388 N4BP1O75113 896 aaKnown RBP8.48□□□□□ -1.05
VAT1-209ENST00000592388 CXCL14O95715 111 aa8.48□□□□□ -1.05
VAT1-209ENST00000592388 FGFR1P11362 822 aa8.48□□□□□ -1.05
VAT1-209ENST00000592388 MRPS6P82932 125 aaKnown RBP8.48□□□□□ -1.05
VAT1-209ENST00000592388 SP4Q02446 784 aa8.48□□□□□ -1.05
VAT1-209ENST00000592388 NFX1Q12986 1120 aaKnown RBP8.48□□□□□ -1.05
VAT1-209ENST00000592388 PAK2Q13177 524 aa8.48□□□□□ -1.05
VAT1-209ENST00000592388 SART3Q15020 963 aaKnown RBP8.48□□□□□ -1.05
VAT1-209ENST00000592388 TMEM266Q2M3C6 531 aa8.48□□□□□ -1.05
VAT1-209ENST00000592388 LETM2Q2VYF4 491 aa8.48□□□□□ -1.05
VAT1-209ENST00000592388 SOWAHCQ53LP3 525 aaPredicted RBP8.48□□□□□ -1.05
VAT1-209ENST00000592388 KCNV1Q6PIU1 500 aa8.48□□□□□ -1.05
VAT1-209ENST00000592388 USP17L6PQ6QN14 398 aa8.48□□□□□ -1.05
VAT1-209ENST00000592388 KCNT2Q6UVM3 1135 aa8.48□□□□□ -1.05
VAT1-209ENST00000592388 PRR23BQ6ZRT6 265 aa8.48□□□□□ -1.05
VAT1-209ENST00000592388 GPR149Q86SP6 731 aa8.48□□□□□ -1.05
VAT1-209ENST00000592388 AUTS2Q8WXX7 1259 aa8.48□□□□□ -1.05
VAT1-209ENST00000592388 MAP4K1Q92918 833 aa8.48□□□□□ -1.05
VAT1-209ENST00000592388 ZBTB10Q96DT7 871 aa8.48□□□□□ -1.05
VAT1-209ENST00000592388 LSG1Q9H089 658 aaKnown RBP8.48□□□□□ -1.05
VAT1-209ENST00000592388 FAM49AQ9H0Q0 323 aaPredicted RBP8.48□□□□□ -1.05
VAT1-209ENST00000592388 TMX1Q9H3N1 280 aa8.48□□□□□ -1.05
VAT1-209ENST00000592388 RTEL1Q9NZ71 1219 aa8.48□□□□□ -1.05
VAT1-209ENST00000592388 ZNF215Q9UL58 517 aaPredicted RBP8.48□□□□□ -1.05
VAT1-209ENST00000592388 FNDC1Q4ZHG4 1894 aaPredicted RBP8.48□□□□□ -1.05
VAT1-209ENST00000592388 NRCAMQ92823 1304 aa8.48□□□□□ -1.05
VAT1-209ENST00000592388 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.47□□□□□ -1.05
VAT1-209ENST00000592388 SLC27A2O14975 620 aa8.47□□□□□ -1.05
VAT1-209ENST00000592388 DDAH1O94760 285 aa8.47□□□□□ -1.05
VAT1-209ENST00000592388 RETP07949 1114 aa8.47□□□□□ -1.05
VAT1-209ENST00000592388 SPINK2P20155 84 aa8.47□□□□□ -1.05
VAT1-209ENST00000592388 RBM25P49756 843 aaKnown RBP8.47□□□□□ -1.05
VAT1-209ENST00000592388 PPFIA1Q13136 1202 aa8.47□□□□□ -1.05
VAT1-209ENST00000592388 UBXN2BQ14CS0 331 aa8.47□□□□□ -1.05
VAT1-209ENST00000592388 LAIR1Q6GTX8 287 aa8.47□□□□□ -1.05
VAT1-209ENST00000592388 CYFIP1Q7L576 1253 aa8.47□□□□□ -1.05
VAT1-209ENST00000592388 SRBD1Q8N5C6 995 aaKnown RBP8.47□□□□□ -1.05
VAT1-209ENST00000592388 CTCFLQ8NI51 663 aaPredicted RBP8.47□□□□□ -1.05
VAT1-209ENST00000592388 GLG1Q92896 1179 aa8.47□□□□□ -1.05
VAT1-209ENST00000592388 ZNF558Q96NG5 402 aa8.47□□□□□ -1.05
VAT1-209ENST00000592388 INPP4AQ96PE3 977 aaPredicted RBP8.47□□□□□ -1.05
VAT1-209ENST00000592388 SPZ1Q9BXG8 430 aa8.47□□□□□ -1.05
VAT1-209ENST00000592388 TUBE1Q9UJT0 475 aa8.47□□□□□ -1.05
VAT1-209ENST00000592388 MTF2Q9Y483 593 aaPredicted RBP8.47□□□□□ -1.05
VAT1-209ENST00000592388 DENND4AQ7Z401 1863 aa8.47□□□□□ -1.05
VAT1-209ENST00000592388 KANSL1LA0AUZ9 987 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 MEIS2O14770 477 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 MGEA5O60502 916 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 STARD6P59095 220 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 IGBP1P78318 339 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 SNW1Q13573 536 aaKnown RBP8.46□□□□□ -1.06
VAT1-209ENST00000592388 CSRP2Q16527 193 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 UBE2SQ16763 222 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 IER5Q5VY09 327 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 CREB3L3Q68CJ9 461 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 CASC1Q6TDU7 716 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 NFXL1Q6ZNB6 911 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 LRRC55Q6ZSA7 311 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 MICU3Q86XE3 530 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 SMARCC2Q8TAQ2 1214 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 SLC22A17Q8WUG5 538 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 NELL1Q92832 810 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 KIF12Q96FN5 646 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 SHDQ96IW2 340 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 TCEANC2Q96MN5 208 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 MYADMQ96S97 322 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 ADAM2Q99965 735 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 ESYT1Q9BSJ8 1104 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 SFXN1Q9H9B4 322 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 ATP6V0A4Q9HBG4 840 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 MAP3K20Q9NYL2 800 aaKnown RBP8.46□□□□□ -1.06
VAT1-209ENST00000592388 SPG21Q9NZD8 308 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 PKD2L1Q9P0L9 805 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 TRPV2Q9Y5S1 764 aa8.46□□□□□ -1.06
VAT1-209ENST00000592388 DENND3A2RUS2 1198 aa8.45□□□□□ -1.06
VAT1-209ENST00000592388 CCDC69A6NI79 296 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms