RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 LILRB2Q8N423 598 aa8.97□□□□□ -0.97
VMP1-213ENST00000591877 THAP3Q8WTV1 239 aaPredicted RBP8.97□□□□□ -0.97
VMP1-213ENST00000591877 DYNLL2Q96FJ2 89 aa8.97□□□□□ -0.97
VMP1-213ENST00000591877 PLPPR2Q96GM1 343 aa8.97□□□□□ -0.97
VMP1-213ENST00000591877 C12orf42Q96LP6 360 aa8.97□□□□□ -0.97
VMP1-213ENST00000591877 CCDC86Q9H6F5 360 aaKnown RBP8.97□□□□□ -0.97
VMP1-213ENST00000591877 TMEM260Q9NX78 707 aa8.97□□□□□ -0.97
VMP1-213ENST00000591877 TMOD4Q9NZQ9 345 aa8.97□□□□□ -0.97
VMP1-213ENST00000591877 RBPJLQ9UBG7 517 aa8.97□□□□□ -0.97
VMP1-213ENST00000591877 ADAM30Q9UKF2 790 aa8.97□□□□□ -0.97
VMP1-213ENST00000591877 GJD2Q9UKL4 321 aa8.97□□□□□ -0.97
VMP1-213ENST00000591877 GREB1LQ9C091 1923 aaPredicted RBP8.97□□□□□ -0.97
VMP1-213ENST00000591877 A0A1W2PRG0 241 aa8.96□□□□□ -0.98
VMP1-213ENST00000591877 CNMDO75829 334 aa8.96□□□□□ -0.98
VMP1-213ENST00000591877 GJB6O95452 261 aa8.96□□□□□ -0.98
VMP1-213ENST00000591877 IBSPP21815 317 aaPredicted RBP8.96□□□□□ -0.98
VMP1-213ENST00000591877 MAOBP27338 520 aa8.96□□□□□ -0.98
VMP1-213ENST00000591877 CDC25BP30305 580 aa8.96□□□□□ -0.98
VMP1-213ENST00000591877 IRX3P78415 501 aaPredicted RBP8.96□□□□□ -0.98
VMP1-213ENST00000591877 RAB3GAP1Q15042 981 aa8.96□□□□□ -0.98
VMP1-213ENST00000591877 PPP2R5EQ16537 467 aa8.96□□□□□ -0.98
VMP1-213ENST00000591877 MTERF2Q49AM1 385 aa8.96□□□□□ -0.98
VMP1-213ENST00000591877 LRFN4Q6PJG9 635 aa8.96□□□□□ -0.98
VMP1-213ENST00000591877 SIAH1Q8IUQ4 282 aa8.96□□□□□ -0.98
VMP1-213ENST00000591877 SYNPOQ8N3V7 929 aa8.96□□□□□ -0.98
VMP1-213ENST00000591877 KBTBD3Q8NAB2 608 aa8.96□□□□□ -0.98
VMP1-213ENST00000591877 OTUD7AQ8TE49 926 aaPredicted RBP8.96□□□□□ -0.98
VMP1-213ENST00000591877 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.96□□□□□ -0.98
VMP1-213ENST00000591877 KIAA1683Q9H0B3 1180 aa8.96□□□□□ -0.98
VMP1-213ENST00000591877 KCNF1Q9H3M0 494 aa8.96□□□□□ -0.98
VMP1-213ENST00000591877 ATP8A2Q9NTI2 1148 aa8.96□□□□□ -0.98
VMP1-213ENST00000591877 FANCLQ9NW38 375 aa8.96□□□□□ -0.98
VMP1-213ENST00000591877 A0A0G2JMZ2 1700 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 WDR64B1ANS9 1081 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 TNFRSF10CO14798 259 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 GJB1P08034 283 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 AKR1B1P15121 316 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 VCAM1P19320 739 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 NCAPHQ15003 741 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 KIAA1755Q5JYT7 1200 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 C12orf60Q5U649 245 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 CDCP2Q5VXM1 449 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 HGSNATQ68CP4 663 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 CTR9Q6PD62 1173 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 CATSPERGQ6ZRH7 1159 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 KIAA1211Q6ZU35 1233 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 UBE2Q1Q7Z7E8 422 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 KIAA0907Q7Z7F0 614 aaPredicted RBP8.95□□□□□ -0.98
VMP1-213ENST00000591877 CLEC10AQ8IUN9 316 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 FAM178BQ8IXR5 827 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 PI4K2BQ8TCG2 481 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 MICAL1Q8TDZ2 1067 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 OSBP2Q969R2 916 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 ELMO3Q96BJ8 720 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 COA7Q96BR5 231 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 GPATCH3Q96I76 525 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 YTHDC1Q96MU7 727 aaKnown RBP8.95□□□□□ -0.98
VMP1-213ENST00000591877 STRBPQ96SI9 672 aaKnown RBP8.95□□□□□ -0.98
VMP1-213ENST00000591877 FEZ1Q99689 392 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 FAM83CQ9BQN1 747 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 RNF208Q9H0X6 261 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 PORCNQ9H237 461 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 CABP5Q9NP86 173 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 REV1Q9UBZ9 1251 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 SLC4A4Q9Y6R1 1079 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 SALL3Q9BXA9 1300 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 CEP290O15078 2479 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 ALPK3Q96L96 1907 aa8.95□□□□□ -0.98
VMP1-213ENST00000591877 COL11A1P12107 1806 aaPredicted RBP8.94□□□□□ -0.98
VMP1-213ENST00000591877 GSG1L2A8MUP6 293 aa8.94□□□□□ -0.98
VMP1-213ENST00000591877 MPHOSPH10O00566 681 aaKnown RBP8.94□□□□□ -0.98
VMP1-213ENST00000591877 ZNF862O60290 1169 aa8.94□□□□□ -0.98
VMP1-213ENST00000591877 DDAH1O94760 285 aa8.94□□□□□ -0.98
VMP1-213ENST00000591877 CDK8P49336 464 aa8.94□□□□□ -0.98
VMP1-213ENST00000591877 ERVK-24P63145 666 aa8.94□□□□□ -0.98
VMP1-213ENST00000591877 UBXN2AP68543 259 aa8.94□□□□□ -0.98
VMP1-213ENST00000591877 INPP5AQ14642 412 aa8.94□□□□□ -0.98
VMP1-213ENST00000591877 DUOXA2Q1HG44 320 aa8.94□□□□□ -0.98
VMP1-213ENST00000591877 LCE4AQ5TA78 99 aa8.94□□□□□ -0.98
VMP1-213ENST00000591877 ZSCAN25Q6NSZ9 544 aa8.94□□□□□ -0.98
VMP1-213ENST00000591877 RUFY4Q6ZNE9 571 aa8.94□□□□□ -0.98
VMP1-213ENST00000591877 NLRC3Q7RTR2 1065 aa8.94□□□□□ -0.98
VMP1-213ENST00000591877 FAM20CQ8IXL6 584 aa8.94□□□□□ -0.98
VMP1-213ENST00000591877 GPRC5AQ8NFJ5 357 aa8.94□□□□□ -0.98
VMP1-213ENST00000591877 USP6NLQ92738 828 aa8.94□□□□□ -0.98
VMP1-213ENST00000591877 PAGR1Q9BTK6 254 aa8.94□□□□□ -0.98
VMP1-213ENST00000591877 EPN3Q9H201 632 aa8.94□□□□□ -0.98
VMP1-213ENST00000591877 SWAP70Q9UH65 585 aa8.94□□□□□ -0.98
VMP1-213ENST00000591877 hCG_2014768A0A024R1R8 64 aa8.93□□□□□ -0.98
VMP1-213ENST00000591877 M0R2C6 588 aa8.93□□□□□ -0.98
VMP1-213ENST00000591877 TM4SF5O14894 197 aa8.93□□□□□ -0.98
VMP1-213ENST00000591877 PPP1R12AO14974 1030 aaPredicted RBP8.93□□□□□ -0.98
VMP1-213ENST00000591877 RNF113AO15541 343 aaKnown RBP8.93□□□□□ -0.98
VMP1-213ENST00000591877 SGPL1O95470 568 aa8.93□□□□□ -0.98
VMP1-213ENST00000591877 BMP3P12645 472 aa8.93□□□□□ -0.98
VMP1-213ENST00000591877 NME1P15531 152 aaKnown RBP8.93□□□□□ -0.98
VMP1-213ENST00000591877 USP14P54578 494 aa8.93□□□□□ -0.98
VMP1-213ENST00000591877 IGBP1P78318 339 aa8.93□□□□□ -0.98
VMP1-213ENST00000591877 OVOS1Q6IE37 1185 aa8.93□□□□□ -0.98
VMP1-213ENST00000591877 LBX2Q6XYB7 198 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms