RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 NOC2LQ9Y3T9 749 aaKnown RBP11.79□□□□□ -0.52
VPS4B-207ENST00000591519 MYH9P35579 1960 aaKnown RBP11.78□□□□□ -0.52
VPS4B-207ENST00000591519 C9IYK1 514 aa11.78□□□□□ -0.52
VPS4B-207ENST00000591519 MAGEB2O15479 319 aa11.78□□□□□ -0.52
VPS4B-207ENST00000591519 MGEA5O60502 916 aa11.78□□□□□ -0.52
VPS4B-207ENST00000591519 GPR32O75388 356 aa11.78□□□□□ -0.52
VPS4B-207ENST00000591519 RPS6KA5O75582 802 aa11.78□□□□□ -0.52
VPS4B-207ENST00000591519 C22orf31O95567 290 aa11.78□□□□□ -0.52
VPS4B-207ENST00000591519 ITGB1P05556 798 aa11.78□□□□□ -0.52
VPS4B-207ENST00000591519 PSAPP07602 524 aa11.78□□□□□ -0.52
VPS4B-207ENST00000591519 ALADP13716 330 aa11.78□□□□□ -0.52
VPS4B-207ENST00000591519 DNAJB1P25685 340 aa11.78□□□□□ -0.52
VPS4B-207ENST00000591519 PSMA5P28066 241 aa11.78□□□□□ -0.52
VPS4B-207ENST00000591519 PDIA3P30101 505 aaKnown RBP11.78□□□□□ -0.52
VPS4B-207ENST00000591519 PLA2G5P39877 138 aa11.78□□□□□ -0.52
VPS4B-207ENST00000591519 KCNC4Q03721 635 aa11.78□□□□□ -0.52
VPS4B-207ENST00000591519 TMEM266Q2M3C6 531 aa11.78□□□□□ -0.52
VPS4B-207ENST00000591519 KLHL23Q8NBE8 558 aa11.78□□□□□ -0.52
VPS4B-207ENST00000591519 LRFN2Q9ULH4 789 aa11.78□□□□□ -0.52
VPS4B-207ENST00000591519 NAP1L2Q9ULW6 460 aaPredicted RBP11.78□□□□□ -0.52
VPS4B-207ENST00000591519 ST3GAL5Q9UNP4 418 aa11.78□□□□□ -0.52
VPS4B-207ENST00000591519 CEP131Q9UPN4 1083 aa11.78□□□□□ -0.52
VPS4B-207ENST00000591519 PCDHB7Q9Y5E2 793 aa11.78□□□□□ -0.52
VPS4B-207ENST00000591519 ATG2AQ2TAZ0 1938 aa11.78□□□□□ -0.52
VPS4B-207ENST00000591519 REC8O95072 547 aa11.77□□□□□ -0.53
VPS4B-207ENST00000591519 AKAP17AQ02040 695 aaKnown RBP11.77□□□□□ -0.53
VPS4B-207ENST00000591519 ZP2Q05996 745 aa11.77□□□□□ -0.53
VPS4B-207ENST00000591519 DLX2Q07687 328 aaPredicted RBP11.77□□□□□ -0.53
VPS4B-207ENST00000591519 DSC3Q14574 896 aa11.77□□□□□ -0.53
VPS4B-207ENST00000591519 SMAD2Q15796 467 aaKnown RBP11.77□□□□□ -0.53
VPS4B-207ENST00000591519 PRR16Q569H4 304 aa11.77□□□□□ -0.53
VPS4B-207ENST00000591519 PACS2Q86VP3 889 aa11.77□□□□□ -0.53
VPS4B-207ENST00000591519 ADHFE1Q8IWW8 467 aa11.77□□□□□ -0.53
VPS4B-207ENST00000591519 CKAP2LQ8IYA6 745 aa11.77□□□□□ -0.53
VPS4B-207ENST00000591519 LINC01465Q8N7H1 131 aa11.77□□□□□ -0.53
VPS4B-207ENST00000591519 CCDC148Q8NFR7 591 aa11.77□□□□□ -0.53
VPS4B-207ENST00000591519 PHKBQ93100 1093 aa11.77□□□□□ -0.53
VPS4B-207ENST00000591519 RIT2Q99578 217 aa11.77□□□□□ -0.53
VPS4B-207ENST00000591519 ADAM2Q99965 735 aa11.77□□□□□ -0.53
VPS4B-207ENST00000591519 ELAC1Q9H777 363 aaKnown RBP11.77□□□□□ -0.53
VPS4B-207ENST00000591519 GABBR1Q9UBS5 961 aa11.77□□□□□ -0.53
VPS4B-207ENST00000591519 GINS2Q9Y248 185 aa11.77□□□□□ -0.53
VPS4B-207ENST00000591519 PRR33A8MZF0 331 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 C3orf80F5H4A9 247 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 MSH4O15457 936 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 MBTPS2O43462 519 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 EYA4O95677 639 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 SSTR3P32745 418 aaPredicted RBP11.76□□□□□ -0.53
VPS4B-207ENST00000591519 GTF2F1P35269 517 aaKnown RBP eCLIP11.76□□□□□ -0.53
VPS4B-207ENST00000591519 UBE3AQ05086 875 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 KIZQ2M2Z5 673 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 EP400NLQ6ZTU2 488 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 RUFY3Q7L099 469 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 FAM177A1Q8N128 213 aaPredicted RBP11.76□□□□□ -0.53
VPS4B-207ENST00000591519 EFHBQ8N7U6 833 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 POF1BQ8WVV4 589 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 PPP2R3CQ969Q6 453 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 FAM122AQ96E09 287 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 MSLNLQ96KJ4 702 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 FAM167AQ96KS9 214 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 UIMC1Q96RL1 719 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 SLC26A6Q9BXS9 759 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 UPF3BQ9BZI7 483 aaKnown RBP11.76□□□□□ -0.53
VPS4B-207ENST00000591519 ADAMTS10Q9H324 1103 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 AAASQ9NRG9 546 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 NRBP2Q9NSY0 501 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 TMEM161AQ9NX61 479 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 WDR81Q562E7 1941 aa11.76□□□□□ -0.53
VPS4B-207ENST00000591519 FNDC1Q4ZHG4 1894 aaPredicted RBP11.75□□□□□ -0.53
VPS4B-207ENST00000591519 CYP3A7-CYP3A51PA0A087WV96 503 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 DENND3A2RUS2 1198 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 WDR64B1ANS9 1081 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 M0R2N6 131 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 ZNF862O60290 1169 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 TBX10O75333 385 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 EIF4BP23588 611 aaKnown RBP11.75□□□□□ -0.53
VPS4B-207ENST00000591519 CYP3A7P24462 503 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 TMOD1P28289 359 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 SFNP31947 248 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 IRS1P35568 1242 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 GATMP50440 423 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 COASYQ13057 564 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 SMAD4Q13485 552 aaKnown RBP11.75□□□□□ -0.53
VPS4B-207ENST00000591519 E2F4Q16254 413 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 CSPP1Q1MSJ5 1256 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 PAN2Q504Q3 1202 aaKnown RBP11.75□□□□□ -0.53
VPS4B-207ENST00000591519 FAM102BQ5T8I3 360 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 PDE12Q6L8Q7 609 aaKnown RBP11.75□□□□□ -0.53
VPS4B-207ENST00000591519 EFCAB12Q6NXP0 572 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 FAM228AQ86W67 206 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 METTL13Q8N6R0 699 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 RDM1Q8NG50 284 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 RASGRP4Q8TDF6 673 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 SLC5A5Q92911 643 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 ZNF274Q96GC6 653 aaPredicted RBP11.75□□□□□ -0.53
VPS4B-207ENST00000591519 OSMRQ99650 979 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 C22orf23Q9BZE7 217 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 TM6SF1Q9BZW5 370 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 IGFLR1Q9H665 355 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 DISC1Q9NRI5 854 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms