RNA–Protein interactions for RNA: ENST00000590559.2

CLIP3-204, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 4

Gene CLIP3, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-204ENST00000590559 MRPS27Q92552 414 aaKnown RBP13.28□□□□□ -0.28
CLIP3-204ENST00000590559 FAM167AQ96KS9 214 aa13.28□□□□□ -0.28
CLIP3-204ENST00000590559 JAKMIP1Q96N16 626 aaKnown RBP13.28□□□□□ -0.28
CLIP3-204ENST00000590559 RIT2Q99578 217 aa13.28□□□□□ -0.28
CLIP3-204ENST00000590559 DISC1Q9NRI5 854 aa13.28□□□□□ -0.28
CLIP3-204ENST00000590559 CYP3A7-CYP3A51PA0A087WV96 503 aa13.27□□□□□ -0.29
CLIP3-204ENST00000590559 WDR64B1ANS9 1081 aa13.27□□□□□ -0.29
CLIP3-204ENST00000590559 M0R2N6 131 aa13.27□□□□□ -0.29
CLIP3-204ENST00000590559 PSMD10O75832 226 aa13.27□□□□□ -0.29
CLIP3-204ENST00000590559 OATP04181 439 aa13.27□□□□□ -0.29
CLIP3-204ENST00000590559 CYP3A7P24462 503 aa13.27□□□□□ -0.29
CLIP3-204ENST00000590559 PDIA3P30101 505 aaKnown RBP13.27□□□□□ -0.29
CLIP3-204ENST00000590559 GPC3P51654 580 aa13.27□□□□□ -0.29
CLIP3-204ENST00000590559 CLLU1OSQ5K130 101 aa13.27□□□□□ -0.29
CLIP3-204ENST00000590559 BLOC1S2Q6QNY1 142 aa13.27□□□□□ -0.29
CLIP3-204ENST00000590559 ECHDC2Q86YB7 292 aa13.27□□□□□ -0.29
CLIP3-204ENST00000590559 LRRC71Q8N4P6 559 aa13.27□□□□□ -0.29
CLIP3-204ENST00000590559 MBOAT7Q96N66 472 aa13.27□□□□□ -0.29
CLIP3-204ENST00000590559 PHF7Q9BWX1 381 aaPredicted RBP13.27□□□□□ -0.29
CLIP3-204ENST00000590559 SH3GLB2Q9NR46 395 aa13.27□□□□□ -0.29
CLIP3-204ENST00000590559 IGKV6-21A0A0C4DH24 114 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 A0A0U1RQF3 1178 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 HIDE1A8MVS5 230 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 HOXA2O43364 376 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 DARSP14868 501 aaKnown RBP13.26□□□□□ -0.29
CLIP3-204ENST00000590559 TMOD1P28289 359 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 SFNP31947 248 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 ZXDAP98168 799 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 PRKCEQ02156 737 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 NPY5RQ15761 445 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 Q4G0T1 1027 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 SPOUT1Q5T280 376 aaKnown RBP13.26□□□□□ -0.29
CLIP3-204ENST00000590559 SYCE2Q6PIF2 218 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 KCNT2Q6UVM3 1135 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 TRIM67Q6ZTA4 783 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 TRMT1LQ7Z2T5 733 aaKnown RBP13.26□□□□□ -0.29
CLIP3-204ENST00000590559 ALYREFQ86V81 257 aaKnown RBP13.26□□□□□ -0.29
CLIP3-204ENST00000590559 THNSL1Q8IYQ7 743 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 CCDC148Q8NFR7 591 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 CCDC136Q96JN2 1154 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 MFSD14AQ96MC6 490 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 TRAIPQ9BWF2 469 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 NIFKQ9BYG3 293 aaKnown RBP13.26□□□□□ -0.29
CLIP3-204ENST00000590559 UNC45AQ9H3U1 944 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 NRBP2Q9NSY0 501 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 VPS54Q9P1Q0 977 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 NAP1L2Q9ULW6 460 aaPredicted RBP13.26□□□□□ -0.29
CLIP3-204ENST00000590559 AKT3Q9Y243 479 aa13.26□□□□□ -0.29
CLIP3-204ENST00000590559 DENND4AQ7Z401 1863 aa13.25□□□□□ -0.29
CLIP3-204ENST00000590559 EOMESO95936 686 aa13.25□□□□□ -0.29
CLIP3-204ENST00000590559 IBSPP21815 317 aaPredicted RBP13.25□□□□□ -0.29
CLIP3-204ENST00000590559 FGD1P98174 961 aa13.25□□□□□ -0.29
CLIP3-204ENST00000590559 DRP2Q13474 957 aa13.25□□□□□ -0.29
CLIP3-204ENST00000590559 TOB2Q14106 344 aaPredicted RBP13.25□□□□□ -0.29
CLIP3-204ENST00000590559 ANKRD54Q6NXT1 300 aa13.25□□□□□ -0.29
CLIP3-204ENST00000590559 LRRC43Q8N309 656 aa13.25□□□□□ -0.29
CLIP3-204ENST00000590559 RDM1Q8NG50 284 aa13.25□□□□□ -0.29
CLIP3-204ENST00000590559 MICAL1Q8TDZ2 1067 aa13.25□□□□□ -0.29
CLIP3-204ENST00000590559 GJA10Q969M2 543 aa13.25□□□□□ -0.29
CLIP3-204ENST00000590559 MAP7D2Q96T17 732 aa13.25□□□□□ -0.29
CLIP3-204ENST00000590559 SLC26A6Q9BXS9 759 aa13.25□□□□□ -0.29
CLIP3-204ENST00000590559 NCOA5Q9HCD5 579 aaKnown RBP13.25□□□□□ -0.29
CLIP3-204ENST00000590559 NGRNQ9NPE2 291 aaKnown RBP13.25□□□□□ -0.29
CLIP3-204ENST00000590559 SAMM50Q9Y512 469 aa13.25□□□□□ -0.29
CLIP3-204ENST00000590559 MYO10Q9HD67 2058 aa13.25□□□□□ -0.29
CLIP3-204ENST00000590559 WDR87Q6ZQQ6 2873 aa13.25□□□□□ -0.29
CLIP3-204ENST00000590559 ARID2Q68CP9 1835 aa13.25□□□□□ -0.29
CLIP3-204ENST00000590559 ZDBF2Q9HCK1 2354 aa13.24□□□□□ -0.29
CLIP3-204ENST00000590559 TMEM221A6NGB7 291 aa13.24□□□□□ -0.29
CLIP3-204ENST00000590559 M0R296 226 aa13.24□□□□□ -0.29
CLIP3-204ENST00000590559 GAS7O60861 476 aa13.24□□□□□ -0.29
CLIP3-204ENST00000590559 ZSCAN20P17040 1043 aaPredicted RBP13.24□□□□□ -0.29
CLIP3-204ENST00000590559 PPM1AP35813 382 aa13.24□□□□□ -0.29
CLIP3-204ENST00000590559 PBX3P40426 434 aa13.24□□□□□ -0.29
CLIP3-204ENST00000590559 MRE11P49959 708 aa13.24□□□□□ -0.29
CLIP3-204ENST00000590559 JAK3P52333 1124 aa13.24□□□□□ -0.29
CLIP3-204ENST00000590559 LRCH2Q5VUJ6 765 aa13.24□□□□□ -0.29
CLIP3-204ENST00000590559 PLPP4Q5VZY2 271 aa13.24□□□□□ -0.29
CLIP3-204ENST00000590559 SLC39A11Q8N1S5 342 aa13.24□□□□□ -0.29
CLIP3-204ENST00000590559 DAGLBQ8NCG7 672 aa13.24□□□□□ -0.29
CLIP3-204ENST00000590559 ETNPPLQ8TBG4 499 aa13.24□□□□□ -0.29
CLIP3-204ENST00000590559 TBCKQ8TEA7 893 aa13.24□□□□□ -0.29
CLIP3-204ENST00000590559 ASIC4Q96FT7 647 aa13.24□□□□□ -0.29
CLIP3-204ENST00000590559 ZNF668Q96K58 619 aaPredicted RBP13.24□□□□□ -0.29
CLIP3-204ENST00000590559 ZNF558Q96NG5 402 aa13.24□□□□□ -0.29
CLIP3-204ENST00000590559 TCF25Q9BQ70 676 aa13.24□□□□□ -0.29
CLIP3-204ENST00000590559 TEKT3Q9BXF9 490 aa13.24□□□□□ -0.29
CLIP3-204ENST00000590559 ZSWIM6Q9HCJ5 1215 aa13.24□□□□□ -0.29
CLIP3-204ENST00000590559 PCDHA4Q9UN74 947 aa13.24□□□□□ -0.29
CLIP3-204ENST00000590559 EPB41L2O43491 1005 aaKnown RBP13.23□□□□□ -0.29
CLIP3-204ENST00000590559 HOXB8P17481 243 aaPredicted RBP13.23□□□□□ -0.29
CLIP3-204ENST00000590559 FGFR4P22455 802 aa13.23□□□□□ -0.29
CLIP3-204ENST00000590559 PSMA5P28066 241 aa13.23□□□□□ -0.29
CLIP3-204ENST00000590559 CCT2P78371 535 aaKnown RBP13.23□□□□□ -0.29
CLIP3-204ENST00000590559 CDC42EP1Q00587 391 aa13.23□□□□□ -0.29
CLIP3-204ENST00000590559 AKAP17AQ02040 695 aaKnown RBP13.23□□□□□ -0.29
CLIP3-204ENST00000590559 IER5LQ5T953 404 aa13.23□□□□□ -0.29
CLIP3-204ENST00000590559 MOXD1Q6UVY6 613 aa13.23□□□□□ -0.29
CLIP3-204ENST00000590559 RUFY3Q7L099 469 aa13.23□□□□□ -0.29
CLIP3-204ENST00000590559 FAM177A1Q8N128 213 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms