RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 C17orf80Q9BSJ5 609 aa20.38■□□□□ 0.85
DDX39A-212ENST00000590260 FTHL17Q9BXU8 183 aa20.38■□□□□ 0.85
DDX39A-212ENST00000590260 SUCLA2Q9P2R7 463 aaPredicted RBP20.38■□□□□ 0.85
DDX39A-212ENST00000590260 NLRC5Q86WI3 1866 aa20.38■□□□□ 0.85
DDX39A-212ENST00000590260 KIAA1671Q9BY89 1806 aa20.38■□□□□ 0.85
DDX39A-212ENST00000590260 A0A087WZ62 844 aa20.37■□□□□ 0.85
DDX39A-212ENST00000590260 C9IYK1 514 aa20.37■□□□□ 0.85
DDX39A-212ENST00000590260 GATMP50440 423 aa20.37■□□□□ 0.85
DDX39A-212ENST00000590260 FXR2P51116 673 aaKnown RBP eCLIP20.37■□□□□ 0.85
DDX39A-212ENST00000590260 XKR9Q5GH70 373 aa20.37■□□□□ 0.85
DDX39A-212ENST00000590260 IGSF22Q8N9C0 903 aa20.37■□□□□ 0.85
DDX39A-212ENST00000590260 MAFAQ8NHW3 353 aaPredicted RBP20.37■□□□□ 0.85
DDX39A-212ENST00000590260 ADAM2Q99965 735 aa20.37■□□□□ 0.85
DDX39A-212ENST00000590260 FDXACB1Q9BRP7 624 aaPredicted RBP20.37■□□□□ 0.85
DDX39A-212ENST00000590260 POLR3CQ9BUI4 534 aaPredicted RBP20.37■□□□□ 0.85
DDX39A-212ENST00000590260 IFT122Q9HBG6 1241 aa20.37■□□□□ 0.85
DDX39A-212ENST00000590260 RGS18Q9NS28 235 aa20.37■□□□□ 0.85
DDX39A-212ENST00000590260 ANKEF1Q9NU02 776 aa20.37■□□□□ 0.85
DDX39A-212ENST00000590260 DGKIO75912 1065 aa20.36■□□□□ 0.85
DDX39A-212ENST00000590260 RARRES1P49788 294 aa20.36■□□□□ 0.85
DDX39A-212ENST00000590260 EMC2Q15006 297 aa20.36■□□□□ 0.85
DDX39A-212ENST00000590260 POTEGQ6S5H5 508 aa20.36■□□□□ 0.85
DDX39A-212ENST00000590260 RHPN2Q8IUC4 686 aa20.36■□□□□ 0.85
DDX39A-212ENST00000590260 PRPF31Q8WWY3 499 aaKnown RBP20.36■□□□□ 0.85
DDX39A-212ENST00000590260 YME1L1Q96TA2 773 aa20.36■□□□□ 0.85
DDX39A-212ENST00000590260 TUFT1Q9NNX1 390 aa20.36■□□□□ 0.85
DDX39A-212ENST00000590260 MTUS1Q9ULD2 1270 aa20.36■□□□□ 0.85
DDX39A-212ENST00000590260 PPME1Q9Y570 386 aa20.36■□□□□ 0.85
DDX39A-212ENST00000590260 PRUNE2Q8WUY3 3088 aa20.36■□□□□ 0.85
DDX39A-212ENST00000590260 RALGAPA2Q2PPJ7 1873 aa20.35■□□□□ 0.85
DDX39A-212ENST00000590260 PP2D1A8MPX8 630 aa20.35■□□□□ 0.85
DDX39A-212ENST00000590260 H3BQV1 296 aa20.35■□□□□ 0.85
DDX39A-212ENST00000590260 K7ELQ4 463 aaPredicted RBP20.35■□□□□ 0.85
DDX39A-212ENST00000590260 GPR182O15218 404 aa20.35■□□□□ 0.85
DDX39A-212ENST00000590260 RFC5P40937 340 aa20.35■□□□□ 0.85
DDX39A-212ENST00000590260 POLGP54098 1239 aaPredicted RBP20.35■□□□□ 0.85
DDX39A-212ENST00000590260 FAM189BP81408 668 aa20.35■□□□□ 0.85
DDX39A-212ENST00000590260 GRB10Q13322 594 aa20.35■□□□□ 0.85
DDX39A-212ENST00000590260 RILPL1Q5EBL4 403 aa20.35■□□□□ 0.85
DDX39A-212ENST00000590260 OTUD6AQ7L8S5 288 aa20.35■□□□□ 0.85
DDX39A-212ENST00000590260 NLRP7Q8WX94 980 aa20.35■□□□□ 0.85
DDX39A-212ENST00000590260 SNX21Q969T3 373 aa20.35■□□□□ 0.85
DDX39A-212ENST00000590260 TGS1Q96RS0 853 aaKnown RBP20.35■□□□□ 0.85
DDX39A-212ENST00000590260 MINDY3Q9H8M7 445 aa20.35■□□□□ 0.85
DDX39A-212ENST00000590260 FOXD4L1Q9NU39 408 aa20.35■□□□□ 0.85
DDX39A-212ENST00000590260 RNF19AQ9NV58 838 aa20.35■□□□□ 0.85
DDX39A-212ENST00000590260 FNDC1Q4ZHG4 1894 aaPredicted RBP20.35■□□□□ 0.85
DDX39A-212ENST00000590260 ADGRA3Q8IWK6 1321 aa20.34■□□□□ 0.85
DDX39A-212ENST00000590260 ATG2AQ2TAZ0 1938 aa20.34■□□□□ 0.85
DDX39A-212ENST00000590260 POU3F3P20264 500 aaPredicted RBP20.34■□□□□ 0.85
DDX39A-212ENST00000590260 RPA1P27694 616 aa20.34■□□□□ 0.85
DDX39A-212ENST00000590260 SARSP49591 514 aaKnown RBP20.34■□□□□ 0.85
DDX39A-212ENST00000590260 ATP2C1P98194 919 aaPredicted RBP20.34■□□□□ 0.85
DDX39A-212ENST00000590260 ZNF410Q86VK4 478 aa20.34■□□□□ 0.85
DDX39A-212ENST00000590260 NPAS4Q8IUM7 802 aa20.34■□□□□ 0.85
DDX39A-212ENST00000590260 GDPD5Q8WTR4 605 aa20.34■□□□□ 0.85
DDX39A-212ENST00000590260 SLC7A3Q8WY07 619 aa20.34■□□□□ 0.85
DDX39A-212ENST00000590260 GAS2L1Q99501 681 aaPredicted RBP20.34■□□□□ 0.85
DDX39A-212ENST00000590260 MMTAG2Q9BU76 263 aaKnown RBP20.34■□□□□ 0.85
DDX39A-212ENST00000590260 COL4A3BPQ9Y5P4 624 aa20.34■□□□□ 0.85
DDX39A-212ENST00000590260 MTCH2Q9Y6C9 303 aa20.34■□□□□ 0.85
DDX39A-212ENST00000590260 CDC25AP30304 524 aa20.33■□□□□ 0.85
DDX39A-212ENST00000590260 DNM2P50570 870 aa20.33■□□□□ 0.85
DDX39A-212ENST00000590260 LAMTOR4Q0VGL1 99 aa20.33■□□□□ 0.85
DDX39A-212ENST00000590260 FERMT3Q86UX7 667 aa20.33■□□□□ 0.85
DDX39A-212ENST00000590260 ZNF710Q8N1W2 664 aa20.33■□□□□ 0.85
DDX39A-212ENST00000590260 ASAP3Q8TDY4 903 aa20.33■□□□□ 0.85
DDX39A-212ENST00000590260 INTS4Q96HW7 963 aaKnown RBP20.33■□□□□ 0.85
DDX39A-212ENST00000590260 NLRP4Q96MN2 994 aa20.33■□□□□ 0.85
DDX39A-212ENST00000590260 JPH2Q9BR39 696 aaPredicted RBP20.33■□□□□ 0.85
DDX39A-212ENST00000590260 PRDM6Q9NQX0 595 aa20.33■□□□□ 0.85
DDX39A-212ENST00000590260 XRCC6P12956 609 aaKnown RBP eCLIP20.32■□□□□ 0.84
DDX39A-212ENST00000590260 SYT1P21579 422 aa20.32■□□□□ 0.84
DDX39A-212ENST00000590260 IGFBP4P22692 258 aa20.32■□□□□ 0.84
DDX39A-212ENST00000590260 PRPHP41219 470 aa20.32■□□□□ 0.84
DDX39A-212ENST00000590260 PDIA5Q14554 519 aa20.32■□□□□ 0.84
DDX39A-212ENST00000590260 EPC2Q52LR7 807 aa20.32■□□□□ 0.84
DDX39A-212ENST00000590260 FAM102BQ5T8I3 360 aa20.32■□□□□ 0.84
DDX39A-212ENST00000590260 SLC24A5Q71RS6 500 aa20.32■□□□□ 0.84
DDX39A-212ENST00000590260 MTRQ99707 1265 aa20.32■□□□□ 0.84
DDX39A-212ENST00000590260 GCOM2Q9BZD3 368 aaPredicted RBP20.32■□□□□ 0.84
DDX39A-212ENST00000590260 GPRC5CQ9NQ84 441 aa20.32■□□□□ 0.84
DDX39A-212ENST00000590260 HCSTQ9UBK5 93 aa20.32■□□□□ 0.84
DDX39A-212ENST00000590260 LRWD1Q9UFC0 647 aa20.32■□□□□ 0.84
DDX39A-212ENST00000590260 DBR1Q9UK59 544 aaKnown RBP20.32■□□□□ 0.84
DDX39A-212ENST00000590260 UNC80Q8N2C7 3258 aa20.31■□□□□ 0.84
DDX39A-212ENST00000590260 DENND3A2RUS2 1198 aa20.31■□□□□ 0.84
DDX39A-212ENST00000590260 ATF7P17544 494 aaPredicted RBP20.31■□□□□ 0.84
DDX39A-212ENST00000590260 ARL2P36404 184 aa20.31■□□□□ 0.84
DDX39A-212ENST00000590260 RESTQ13127 1097 aa20.31■□□□□ 0.84
DDX39A-212ENST00000590260 PSPC1Q8WXF1 523 aaKnown RBP20.31■□□□□ 0.84
DDX39A-212ENST00000590260 SCLT1Q96NL6 688 aa20.31■□□□□ 0.84
DDX39A-212ENST00000590260 C1orf112Q9NSG2 853 aa20.31■□□□□ 0.84
DDX39A-212ENST00000590260 MRPL42Q9Y6G3 142 aaKnown RBP20.31■□□□□ 0.84
DDX39A-212ENST00000590260 VPS37CA5D8V6 355 aaPredicted RBP20.3■□□□□ 0.84
DDX39A-212ENST00000590260 LAD1O00515 517 aa20.3■□□□□ 0.84
DDX39A-212ENST00000590260 USO1O60763 962 aaKnown RBP20.3■□□□□ 0.84
DDX39A-212ENST00000590260 DGAT1O75907 488 aa20.3■□□□□ 0.84
DDX39A-212ENST00000590260 SRGAP2CP0DJJ0 459 aa20.3■□□□□ 0.84
DDX39A-212ENST00000590260 IBSPP21815 317 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms