RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 IGBP1P78318 339 aa16.78■□□□□ 0.28
DDX39A-211ENST00000590239 ADAM17P78536 824 aa16.78■□□□□ 0.28
DDX39A-211ENST00000590239 NBPF20Q3BBV1 942 aa16.78■□□□□ 0.28
DDX39A-211ENST00000590239 FAM26FQ5R3K3 315 aa16.78■□□□□ 0.28
DDX39A-211ENST00000590239 MARCH8Q5T0T0 291 aa16.78■□□□□ 0.28
DDX39A-211ENST00000590239 NFRKBQ6P4R8 1299 aa16.78■□□□□ 0.28
DDX39A-211ENST00000590239 MTHFD1LQ6UB35 978 aa16.78■□□□□ 0.28
DDX39A-211ENST00000590239 MAEAQ7L5Y9 396 aa16.78■□□□□ 0.28
DDX39A-211ENST00000590239 MYCT1Q8N699 235 aa16.78■□□□□ 0.28
DDX39A-211ENST00000590239 MLKLQ8NB16 471 aa16.78■□□□□ 0.28
DDX39A-211ENST00000590239 LMBR1Q8WVP7 490 aa16.78■□□□□ 0.28
DDX39A-211ENST00000590239 GLT1D1Q96MS3 346 aa16.78■□□□□ 0.28
DDX39A-211ENST00000590239 SETD4Q9NVD3 440 aa16.78■□□□□ 0.28
DDX39A-211ENST00000590239 LARSQ9P2J5 1176 aaKnown RBP16.78■□□□□ 0.28
DDX39A-211ENST00000590239 MBLAC1A4D2B0 266 aaPredicted RBP16.77■□□□□ 0.28
DDX39A-211ENST00000590239 SFI1A8K8P3 1242 aa16.77■□□□□ 0.28
DDX39A-211ENST00000590239 SGPL1O95470 568 aa16.77■□□□□ 0.28
DDX39A-211ENST00000590239 MAPTP10636 758 aaKnown RBP16.77■□□□□ 0.28
DDX39A-211ENST00000590239 PTPN11Q06124 597 aaPredicted RBP16.77■□□□□ 0.28
DDX39A-211ENST00000590239 PPP2R5AQ15172 486 aa16.77■□□□□ 0.28
DDX39A-211ENST00000590239 COBLL1Q53SF7 1204 aa16.77■□□□□ 0.28
DDX39A-211ENST00000590239 ODR4Q5SWX8 454 aa16.77■□□□□ 0.28
DDX39A-211ENST00000590239 SFR1Q86XK3 245 aa16.77■□□□□ 0.28
DDX39A-211ENST00000590239 LINC01465Q8N7H1 131 aa16.77■□□□□ 0.28
DDX39A-211ENST00000590239 SLC17A8Q8NDX2 589 aa16.77■□□□□ 0.28
DDX39A-211ENST00000590239 SPIRE2Q8WWL2 714 aa16.77■□□□□ 0.28
DDX39A-211ENST00000590239 TMEM143Q96AN5 459 aa16.77■□□□□ 0.28
DDX39A-211ENST00000590239 SEZ6LQ9BYH1 1024 aa16.77■□□□□ 0.28
DDX39A-211ENST00000590239 POLR3FQ9H1D9 316 aaPredicted RBP16.77■□□□□ 0.28
DDX39A-211ENST00000590239 GPRC5CQ9NQ84 441 aa16.77■□□□□ 0.28
DDX39A-211ENST00000590239 HDAC6Q9UBN7 1215 aa16.77■□□□□ 0.28
DDX39A-211ENST00000590239 PCDHA2Q9Y5H9 948 aa16.77■□□□□ 0.28
DDX39A-211ENST00000590239 C17orf102A2RUQ5 167 aa16.76■□□□□ 0.27
DDX39A-211ENST00000590239 CAVIN2O95810 425 aa16.76■□□□□ 0.27
DDX39A-211ENST00000590239 SCP2P22307 547 aa16.76■□□□□ 0.27
DDX39A-211ENST00000590239 TMOD1P28289 359 aa16.76■□□□□ 0.27
DDX39A-211ENST00000590239 PPP1R2P41236 205 aa16.76■□□□□ 0.27
DDX39A-211ENST00000590239 STK4Q13043 487 aa16.76■□□□□ 0.27
DDX39A-211ENST00000590239 MXD4Q14582 209 aaPredicted RBP16.76■□□□□ 0.27
DDX39A-211ENST00000590239 DPCR1Q3MIW9 517 aa16.76■□□□□ 0.27
DDX39A-211ENST00000590239 CT47A1Q5JQC4 288 aaPredicted RBP16.76■□□□□ 0.27
DDX39A-211ENST00000590239 ISM2Q6H9L7 571 aa16.76■□□□□ 0.27
DDX39A-211ENST00000590239 EFCAB12Q6NXP0 572 aa16.76■□□□□ 0.27
DDX39A-211ENST00000590239 U2AF1L4Q8WU68 220 aaKnown RBP16.76■□□□□ 0.27
DDX39A-211ENST00000590239 PSPC1Q8WXF1 523 aaKnown RBP16.76■□□□□ 0.27
DDX39A-211ENST00000590239 IFT74Q96LB3 600 aa16.76■□□□□ 0.27
DDX39A-211ENST00000590239 NTPCRQ9BSD7 190 aaKnown RBP16.76■□□□□ 0.27
DDX39A-211ENST00000590239 TSPY26PQ9H489 355 aa16.76■□□□□ 0.27
DDX39A-211ENST00000590239 SUGCTQ9HAC7 445 aa16.76■□□□□ 0.27
DDX39A-211ENST00000590239 POLD4Q9HCU8 107 aa16.76■□□□□ 0.27
DDX39A-211ENST00000590239 GTF2IRD1Q9UHL9 959 aa16.76■□□□□ 0.27
DDX39A-211ENST00000590239 DACH1Q9UI36 760 aa16.76■□□□□ 0.27
DDX39A-211ENST00000590239 GRIN2DO15399 1336 aa16.75■□□□□ 0.27
DDX39A-211ENST00000590239 A0A1W2PQ45 241 aaPredicted RBP16.75■□□□□ 0.27
DDX39A-211ENST00000590239 A0A1W2PQY0 241 aa16.75■□□□□ 0.27
DDX39A-211ENST00000590239 CCDC85CA6NKD9 419 aa16.75■□□□□ 0.27
DDX39A-211ENST00000590239 ASAP2O43150 1006 aa16.75■□□□□ 0.27
DDX39A-211ENST00000590239 SMTNP53814 917 aa16.75■□□□□ 0.27
DDX39A-211ENST00000590239 SOX10P56693 466 aa16.75■□□□□ 0.27
DDX39A-211ENST00000590239 DMP1Q13316 513 aaPredicted RBP16.75■□□□□ 0.27
DDX39A-211ENST00000590239 MKRN4PQ13434 485 aaPredicted RBP16.75■□□□□ 0.27
DDX39A-211ENST00000590239 ITGA7Q13683 1181 aa16.75■□□□□ 0.27
DDX39A-211ENST00000590239 ALCAMQ13740 583 aa16.75■□□□□ 0.27
DDX39A-211ENST00000590239 STXBP4Q6ZWJ1 553 aa16.75■□□□□ 0.27
DDX39A-211ENST00000590239 FAM178BQ8IXR5 827 aa16.75■□□□□ 0.27
DDX39A-211ENST00000590239 METTL13Q8N6R0 699 aa16.75■□□□□ 0.27
DDX39A-211ENST00000590239 KIAA0895Q8NCT3 520 aa16.75■□□□□ 0.27
DDX39A-211ENST00000590239 PRPF31Q8WWY3 499 aaKnown RBP16.75■□□□□ 0.27
DDX39A-211ENST00000590239 HPS3Q969F9 1004 aa16.75■□□□□ 0.27
DDX39A-211ENST00000590239 VTI1AQ96AJ9 217 aa16.75■□□□□ 0.27
DDX39A-211ENST00000590239 MCOLN1Q9GZU1 580 aa16.75■□□□□ 0.27
DDX39A-211ENST00000590239 ST6GALNAC4Q9H4F1 302 aa16.75■□□□□ 0.27
DDX39A-211ENST00000590239 MRPL44Q9H9J2 332 aaKnown RBP16.75■□□□□ 0.27
DDX39A-211ENST00000590239 SLC39A2Q9NP94 309 aa16.75■□□□□ 0.27
DDX39A-211ENST00000590239 SUCLA2Q9P2R7 463 aaPredicted RBP16.75■□□□□ 0.27
DDX39A-211ENST00000590239 GDAQ9Y2T3 454 aa16.75■□□□□ 0.27
DDX39A-211ENST00000590239 SMIM35A0A1B0GVV1 85 aa16.74■□□□□ 0.27
DDX39A-211ENST00000590239 H0YCG3 227 aa16.74■□□□□ 0.27
DDX39A-211ENST00000590239 TFRCP02786 760 aaKnown RBP16.74■□□□□ 0.27
DDX39A-211ENST00000590239 GLRA2P23416 452 aa16.74■□□□□ 0.27
DDX39A-211ENST00000590239 ABCD1P33897 745 aa16.74■□□□□ 0.27
DDX39A-211ENST00000590239 NAMPTP43490 491 aa16.74■□□□□ 0.27
DDX39A-211ENST00000590239 NPTX2P47972 431 aa16.74■□□□□ 0.27
DDX39A-211ENST00000590239 GJA8P48165 433 aa16.74■□□□□ 0.27
DDX39A-211ENST00000590239 CLCN3P51790 818 aa16.74■□□□□ 0.27
DDX39A-211ENST00000590239 PEX3P56589 373 aa16.74■□□□□ 0.27
DDX39A-211ENST00000590239 DRP2Q13474 957 aa16.74■□□□□ 0.27
DDX39A-211ENST00000590239 STIM1Q13586 685 aa16.74■□□□□ 0.27
DDX39A-211ENST00000590239 HIC1Q14526 733 aa16.74■□□□□ 0.27
DDX39A-211ENST00000590239 EPM2AIP1Q7L775 607 aaPredicted RBP16.74■□□□□ 0.27
DDX39A-211ENST00000590239 ZNF720Q7Z2F6 126 aa16.74■□□□□ 0.27
DDX39A-211ENST00000590239 ZNF710Q8N1W2 664 aa16.74■□□□□ 0.27
DDX39A-211ENST00000590239 GUF1Q8N442 669 aaKnown RBP16.74■□□□□ 0.27
DDX39A-211ENST00000590239 LRRC71Q8N4P6 559 aa16.74■□□□□ 0.27
DDX39A-211ENST00000590239 ANKLE1Q8NAG6 615 aa16.74■□□□□ 0.27
DDX39A-211ENST00000590239 SLC43A3Q8NBI5 491 aa16.74■□□□□ 0.27
DDX39A-211ENST00000590239 BSNDQ8WZ55 320 aa16.74■□□□□ 0.27
DDX39A-211ENST00000590239 KCNN1Q92952 543 aa16.74■□□□□ 0.27
DDX39A-211ENST00000590239 FIZ1Q96SL8 496 aa16.74■□□□□ 0.27
DDX39A-211ENST00000590239 MAP7D2Q96T17 732 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms