RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 PCDHB4Q9Y5E5 795 aa9.39□□□□□ -0.91
VMP1-208ENST00000588617 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.38□□□□□ -0.91
VMP1-208ENST00000588617 PRAMEF22A3QJZ6 481 aa9.38□□□□□ -0.91
VMP1-208ENST00000588617 RASA4BC9J798 803 aa9.38□□□□□ -0.91
VMP1-208ENST00000588617 RASA4O43374 803 aa9.38□□□□□ -0.91
VMP1-208ENST00000588617 HTRA2O43464 458 aaPredicted RBP9.38□□□□□ -0.91
VMP1-208ENST00000588617 MGEA5O60502 916 aa9.38□□□□□ -0.91
VMP1-208ENST00000588617 USP2O75604 605 aaPredicted RBP9.38□□□□□ -0.91
VMP1-208ENST00000588617 KIR2DL1P43626 348 aaPredicted RBP9.38□□□□□ -0.91
VMP1-208ENST00000588617 KIR2DL2P43627 348 aaPredicted RBP9.38□□□□□ -0.91
VMP1-208ENST00000588617 SLC6A11P48066 632 aa9.38□□□□□ -0.91
VMP1-208ENST00000588617 HERVK_113P62684 666 aa9.38□□□□□ -0.91
VMP1-208ENST00000588617 GRIN1Q05586 938 aa9.38□□□□□ -0.91
VMP1-208ENST00000588617 ADCY2Q08462 1091 aa9.38□□□□□ -0.91
VMP1-208ENST00000588617 SPIDRQ14159 915 aa9.38□□□□□ -0.91
VMP1-208ENST00000588617 PRAMEF18Q5VWM3 479 aa9.38□□□□□ -0.91
VMP1-208ENST00000588617 CLEC4GQ6UXB4 293 aa9.38□□□□□ -0.91
VMP1-208ENST00000588617 CEP128Q6ZU80 1094 aa9.38□□□□□ -0.91
VMP1-208ENST00000588617 DAAM2Q86T65 1068 aa9.38□□□□□ -0.91
VMP1-208ENST00000588617 NRG4Q8WWG1 115 aa9.38□□□□□ -0.91
VMP1-208ENST00000588617 LINC01599Q8WXQ3 324 aa9.38□□□□□ -0.91
VMP1-208ENST00000588617 TP53INP1Q96A56 240 aa9.38□□□□□ -0.91
VMP1-208ENST00000588617 RIPOR3Q96MK2 946 aa9.38□□□□□ -0.91
VMP1-208ENST00000588617 GTF2A1LQ9UNN4 478 aa9.38□□□□□ -0.91
VMP1-208ENST00000588617 ASB1Q9Y576 335 aa9.38□□□□□ -0.91
VMP1-208ENST00000588617 GOLGA6L22H0YM25 854 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 ACOT7O00154 380 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 MSL3P1P0C860 447 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 EDNRBP24530 442 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 SARSP49591 514 aaKnown RBP9.37□□□□□ -0.91
VMP1-208ENST00000588617 AGFG1P52594 562 aaKnown RBP9.37□□□□□ -0.91
VMP1-208ENST00000588617 SLC6A3Q01959 620 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 MVKQ03426 396 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 NFIAQ12857 509 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 BIRC3Q13489 604 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 SLC14A2Q15849 920 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 ANO4Q32M45 955 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 PAN2Q504Q3 1202 aaKnown RBP9.37□□□□□ -0.91
VMP1-208ENST00000588617 ALFQ53S48 1182 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 WDR78Q5VTH9 848 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 KIAA1841Q6NSI8 718 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 CCDC70Q6NSX1 233 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 UNQ6494/PRO21346Q6UXR6 183 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 CABP7Q86V35 215 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 KRT78Q8N1N4 520 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 MARCH10Q8NA82 808 aaPredicted RBP9.37□□□□□ -0.91
VMP1-208ENST00000588617 SHKBP1Q8TBC3 707 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 ASB11Q8WXH4 323 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 LRTOMTQ8WZ04 291 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 DBNDD2Q9BQY9 259 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 CRB3Q9BUF7 120 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 ARFGAP3Q9NP61 516 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 EBF1Q9UH73 591 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 LRCH1Q9Y2L9 728 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 TAF6LQ9Y6J9 622 aa9.37□□□□□ -0.91
VMP1-208ENST00000588617 CFAP69A5D8W1 941 aa9.36□□□□□ -0.91
VMP1-208ENST00000588617 CYP26A1O43174 497 aa9.36□□□□□ -0.91
VMP1-208ENST00000588617 PIK3CBP42338 1070 aa9.36□□□□□ -0.91
VMP1-208ENST00000588617 PRIM2P49643 509 aa9.36□□□□□ -0.91
VMP1-208ENST00000588617 MYBPC3Q14896 1274 aa9.36□□□□□ -0.91
VMP1-208ENST00000588617 PDCD2Q16342 344 aaPredicted RBP9.36□□□□□ -0.91
VMP1-208ENST00000588617 C3orf36Q3SXR2 165 aa9.36□□□□□ -0.91
VMP1-208ENST00000588617 LYSMD2Q8IV50 215 aa9.36□□□□□ -0.91
VMP1-208ENST00000588617 NUP43Q8NFH3 380 aa9.36□□□□□ -0.91
VMP1-208ENST00000588617 SEC14L1Q92503 715 aa9.36□□□□□ -0.91
VMP1-208ENST00000588617 CCDC157Q569K6 752 aa9.35□□□□□ -0.91
VMP1-208ENST00000588617 SLFN12LQ6IEE8 588 aa9.35□□□□□ -0.91
VMP1-208ENST00000588617 GALNT18Q6P9A2 607 aa9.35□□□□□ -0.91
VMP1-208ENST00000588617 PRR23CQ6ZRP0 262 aa9.35□□□□□ -0.91
VMP1-208ENST00000588617 DPP9Q86TI2 863 aa9.35□□□□□ -0.91
VMP1-208ENST00000588617 DCP2Q8IU60 420 aaKnown RBP9.35□□□□□ -0.91
VMP1-208ENST00000588617 NKAPQ8N5F7 415 aaKnown RBP9.35□□□□□ -0.91
VMP1-208ENST00000588617 OR2C3Q8N628 320 aa9.35□□□□□ -0.91
VMP1-208ENST00000588617 ATXN2LQ8WWM7 1075 aaKnown RBP9.35□□□□□ -0.91
VMP1-208ENST00000588617 FATE1Q969F0 183 aa9.35□□□□□ -0.91
VMP1-208ENST00000588617 HRASLS5Q96KN8 279 aa9.35□□□□□ -0.91
VMP1-208ENST00000588617 AP5M1Q9H0R1 490 aa9.35□□□□□ -0.91
VMP1-208ENST00000588617 KMT5AQ9NQR1 393 aa9.35□□□□□ -0.91
VMP1-208ENST00000588617 PRSS50Q9UI38 385 aa9.35□□□□□ -0.91
VMP1-208ENST00000588617 SIT1Q9Y3P8 196 aa9.35□□□□□ -0.91
VMP1-208ENST00000588617 MYPNQ86TC9 1320 aa9.34□□□□□ -0.91
VMP1-208ENST00000588617 TCRBV5S2A0A599 114 aa9.34□□□□□ -0.91
VMP1-208ENST00000588617 RHPN2P1A8MT19 583 aa9.34□□□□□ -0.91
VMP1-208ENST00000588617 PCDH8O95206 1070 aa9.34□□□□□ -0.91
VMP1-208ENST00000588617 PRLP01236 227 aa9.34□□□□□ -0.91
VMP1-208ENST00000588617 PFKMP08237 780 aa9.34□□□□□ -0.91
VMP1-208ENST00000588617 RENBPP51606 427 aa9.34□□□□□ -0.91
VMP1-208ENST00000588617 ROM1Q03395 351 aa9.34□□□□□ -0.91
VMP1-208ENST00000588617 PPARAQ07869 468 aa9.34□□□□□ -0.91
VMP1-208ENST00000588617 MALLQ13021 153 aa9.34□□□□□ -0.91
VMP1-208ENST00000588617 AOC3Q16853 763 aa9.34□□□□□ -0.91
VMP1-208ENST00000588617 BICRALQ6AI39 1079 aa9.34□□□□□ -0.91
VMP1-208ENST00000588617 SWSAP1Q6NVH7 229 aa9.34□□□□□ -0.91
VMP1-208ENST00000588617 CCDC174Q6PII3 467 aa9.34□□□□□ -0.91
VMP1-208ENST00000588617 MILR1Q7Z6M3 343 aa9.34□□□□□ -0.91
VMP1-208ENST00000588617 OXR1Q8N573 874 aa9.34□□□□□ -0.91
VMP1-208ENST00000588617 OR14C36Q8NHC7 312 aa9.34□□□□□ -0.91
VMP1-208ENST00000588617 KLHDC4Q8TBB5 520 aa9.34□□□□□ -0.91
VMP1-208ENST00000588617 RSAD2Q8WXG1 361 aa9.34□□□□□ -0.91
VMP1-208ENST00000588617 CCT6BQ92526 530 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms