RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 PPP1R9AQ9ULJ8 1098 aa6.97□□□□□ -1.29
AP000547.3-204ENST00000588548 STX8Q9UNK0 236 aa6.97□□□□□ -1.29
AP000547.3-204ENST00000588548 ARIH1Q9Y4X5 557 aaPredicted RBP6.97□□□□□ -1.29
AP000547.3-204ENST00000588548 COL3A1P02461 1466 aaPredicted RBP6.97□□□□□ -1.29
AP000547.3-204ENST00000588548 A0A0G2JS52 829 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 DCDC2CA8MYV0 355 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 SGTAO43765 313 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 ADCY3O60266 1144 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 SUN1O94901 812 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 EIF2S1P05198 315 aaKnown RBP6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 IGBP1P78318 339 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 RNASELQ05823 741 aaKnown RBP6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 KCNA1Q09470 495 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 AP1B1Q10567 949 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 SF3A3Q12874 501 aaKnown RBP eCLIP6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 IRF5Q13568 498 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 STK38Q15208 465 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 TWISTNBQ3B726 338 aaPredicted RBP6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 LMBRD2Q68DH5 695 aaPredicted RBP6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 CCDC174Q6PII3 467 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 LVRNQ6Q4G3 990 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 CCBE1Q6UXH8 406 aaPredicted RBP6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 CCDC81Q6ZN84 652 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 EIF1ADQ8N9N8 165 aaKnown RBP6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 OR7G1Q8NGA0 311 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 OR2W6PQ8NHA6 318 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 CASKIN2Q8WXE0 1202 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 EFHD2Q96C19 240 aaPredicted RBP6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 MED30Q96HR3 178 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 NEURL2Q9BR09 285 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 LLPHQ9BRT6 129 aaKnown RBP6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 ETNK1Q9HBU6 452 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 EPB41L5Q9HCM4 733 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 CLIC5Q9NZA1 410 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 CRNNQ9UBG3 495 aaPredicted RBP6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 STK39Q9UEW8 545 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 ADD3Q9UEY8 706 aaKnown RBP6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 A2ML1A8K2U0 1454 aa6.96□□□□□ -1.29
AP000547.3-204ENST00000588548 FUOMA2VDF0 154 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 VILLO15195 856 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 KRT86O43790 486 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 HEXIM1O94992 359 aaKnown RBP6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 GLULP15104 373 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 CHN1P15882 459 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 VPS41P49754 854 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 AP3M2P53677 418 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 NAA20P61599 178 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 GIT2Q14161 759 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 TGFBIQ15582 683 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 PCSK7Q16549 785 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 LRRC74BQ6ZQY2 392 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 TAOK1Q7L7X3 1001 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 FASTKD5Q7L8L6 764 aaKnown RBP6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 TXNDC2Q86VQ3 553 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 DDX42Q86XP3 938 aaKnown RBP eCLIP6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 RHOT2Q8IXI1 618 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 CNTROBQ8N137 903 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 FITM2Q8N6M3 262 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 LINC00469Q8N7U9 141 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 RIN3Q8TB24 985 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 PI4K2BQ8TCG2 481 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 RUFY2Q8WXA3 655 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 DYDC2Q96IM9 177 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 COX4I2Q96KJ9 171 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 ZNF184Q99676 751 aaPredicted RBP6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 THAP9Q9H5L6 903 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 USP29Q9HBJ7 922 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 TXLNGQ9NUQ3 528 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 TLR7Q9NYK1 1049 aaKnown RBP6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 ZBTB1Q9Y2K1 713 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 METP08581 1390 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 MYH11P35749 1972 aa6.96□□□□□ -1.3
AP000547.3-204ENST00000588548 TMEM114B3SHH9 223 aa6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 ELL2O00472 640 aaPredicted RBP6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 KCNJ13O60928 360 aa6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 ATP5HO75947 161 aa6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 PABPC1P11940 636 aaKnown RBP6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 GNA11P29992 359 aa6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 GRIA2P42262 883 aa6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 BCAP31P51572 246 aa6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 CLTCQ00610 1675 aaKnown RBP6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 MAP3K10Q02779 954 aa6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 HLTFQ14527 1009 aaKnown RBP eCLIP6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 CCDC6Q16204 474 aa6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 RFPL4BQ6ZWI9 263 aa6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 FOXP4Q8IVH2 680 aaPredicted RBP6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 CEP70Q8NHQ1 597 aa6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 TBC1D16Q8TBP0 767 aa6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 PTCD2Q8WV60 388 aaKnown RBP6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 DPF3Q92784 378 aa6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 SNF8Q96H20 258 aa6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 MED15Q96RN5 788 aa6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 CHP1Q99653 195 aa6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 MTFR1LQ9H019 292 aa6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 GPBP1L1Q9HC44 474 aaPredicted RBP6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 PIH1D3Q9NQM4 214 aaKnown RBP6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 POLR3EQ9NVU0 708 aa6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 HPSEQ9Y251 543 aa6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 ARL2BPQ9Y2Y0 163 aa6.95□□□□□ -1.3
AP000547.3-204ENST00000588548 LRRC7Q96NW7 1537 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms