RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 SPIRE1Q08AE8 756 aa21.89■■□□□ 1.09
TPM4-208ENST00000588410 DRP2Q13474 957 aa21.89■■□□□ 1.09
TPM4-208ENST00000588410 CTTNQ14247 550 aaKnown RBP21.89■■□□□ 1.09
TPM4-208ENST00000588410 TPH2Q8IWU9 490 aa21.89■■□□□ 1.09
TPM4-208ENST00000588410 CRIPAKQ8N1N5 446 aa21.89■■□□□ 1.09
TPM4-208ENST00000588410 MRPL38Q96DV4 380 aaKnown RBP21.89■■□□□ 1.09
TPM4-208ENST00000588410 FOXP1Q9H334 677 aaPredicted RBP21.89■■□□□ 1.09
TPM4-208ENST00000588410 TTC12Q9H892 705 aaPredicted RBP21.89■■□□□ 1.09
TPM4-208ENST00000588410 COL4A6Q14031 1691 aa21.88■■□□□ 1.09
TPM4-208ENST00000588410 C9IYK1 514 aa21.88■■□□□ 1.09
TPM4-208ENST00000588410 MCM7P33993 719 aa21.88■■□□□ 1.09
TPM4-208ENST00000588410 RFC5P40937 340 aa21.88■■□□□ 1.09
TPM4-208ENST00000588410 RHPN2Q8IUC4 686 aa21.88■■□□□ 1.09
TPM4-208ENST00000588410 FBXO18Q8NFZ0 1043 aa21.88■■□□□ 1.09
TPM4-208ENST00000588410 CLP1Q92989 425 aaKnown RBP21.88■■□□□ 1.09
TPM4-208ENST00000588410 HLA-CQ95604 372 aa21.88■■□□□ 1.09
TPM4-208ENST00000588410 ATP6V0A4Q9HBG4 840 aa21.88■■□□□ 1.09
TPM4-208ENST00000588410 WRAP73Q9P2S5 460 aaPredicted RBP21.88■■□□□ 1.09
TPM4-208ENST00000588410 KIF3AQ9Y496 699 aa21.88■■□□□ 1.09
TPM4-208ENST00000588410 MRPL42Q9Y6G3 142 aaKnown RBP21.88■■□□□ 1.09
TPM4-208ENST00000588410 CHD7Q9P2D1 2997 aa21.87■■□□□ 1.09
TPM4-208ENST00000588410 C5orf67F2Z3F1 127 aa21.87■■□□□ 1.09
TPM4-208ENST00000588410 DSC3Q14574 896 aa21.87■■□□□ 1.09
TPM4-208ENST00000588410 TIGD5Q53EQ6 642 aa21.87■■□□□ 1.09
TPM4-208ENST00000588410 XKR9Q5GH70 373 aa21.87■■□□□ 1.09
TPM4-208ENST00000588410 ZNF410Q86VK4 478 aa21.87■■□□□ 1.09
TPM4-208ENST00000588410 NEK9Q8TD19 979 aa21.87■■□□□ 1.09
TPM4-208ENST00000588410 EIF2AK1Q9BQI3 630 aaKnown RBP21.87■■□□□ 1.09
TPM4-208ENST00000588410 PLVAPQ9BX97 442 aa21.87■■□□□ 1.09
TPM4-208ENST00000588410 INO80BQ9C086 356 aaPredicted RBP21.87■■□□□ 1.09
TPM4-208ENST00000588410 TMEM161AQ9NX61 479 aa21.87■■□□□ 1.09
TPM4-208ENST00000588410 A0A087WZ62 844 aa21.86■■□□□ 1.09
TPM4-208ENST00000588410 TBKBP1A7MCY6 615 aa21.86■■□□□ 1.09
TPM4-208ENST00000588410 WNT7AO00755 349 aa21.86■■□□□ 1.09
TPM4-208ENST00000588410 SLITRK3O94933 977 aa21.86■■□□□ 1.09
TPM4-208ENST00000588410 SFPQP23246 707 aaKnown RBP eCLIP21.86■■□□□ 1.09
TPM4-208ENST00000588410 GATMP50440 423 aa21.86■■□□□ 1.09
TPM4-208ENST00000588410 NLRP4Q96MN2 994 aa21.86■■□□□ 1.09
TPM4-208ENST00000588410 CCDC43Q96MW1 224 aaKnown RBP21.86■■□□□ 1.09
TPM4-208ENST00000588410 MTMR9Q96QG7 549 aa21.86■■□□□ 1.09
TPM4-208ENST00000588410 FDXACB1Q9BRP7 624 aaPredicted RBP21.86■■□□□ 1.09
TPM4-208ENST00000588410 ELAC1Q9H777 363 aaKnown RBP21.86■■□□□ 1.09
TPM4-208ENST00000588410 NOL7Q9UMY1 257 aaKnown RBP21.86■■□□□ 1.09
TPM4-208ENST00000588410 FGFR4P22455 802 aa21.85■■□□□ 1.09
TPM4-208ENST00000588410 FAM189BP81408 668 aa21.85■■□□□ 1.09
TPM4-208ENST00000588410 TFF2Q03403 129 aa21.85■■□□□ 1.09
TPM4-208ENST00000588410 ORC2Q13416 577 aaPredicted RBP21.85■■□□□ 1.09
TPM4-208ENST00000588410 SPOUT1Q5T280 376 aaKnown RBP21.85■■□□□ 1.09
TPM4-208ENST00000588410 NOSTRINQ8IVI9 506 aa21.85■■□□□ 1.09
TPM4-208ENST00000588410 ZNF579Q8NAF0 562 aaKnown RBP21.85■■□□□ 1.09
TPM4-208ENST00000588410 LMAN2LQ9H0V9 348 aa21.85■■□□□ 1.09
TPM4-208ENST00000588410 SIP14410 1827 aa21.85■■□□□ 1.09
TPM4-208ENST00000588410 EYSQ5T1H1 3165 aa21.85■■□□□ 1.09
TPM4-208ENST00000588410 HOXA2O43364 376 aa21.84■■□□□ 1.09
TPM4-208ENST00000588410 GAS2O43903 313 aaKnown RBP21.84■■□□□ 1.09
TPM4-208ENST00000588410 CSDE1O75534 798 aaKnown RBP21.84■■□□□ 1.09
TPM4-208ENST00000588410 LINC00271P0C7V0 271 aa21.84■■□□□ 1.09
TPM4-208ENST00000588410 ZNF174Q15697 407 aa21.84■■□□□ 1.09
TPM4-208ENST00000588410 FAM102BQ5T8I3 360 aa21.84■■□□□ 1.09
TPM4-208ENST00000588410 RNF169Q8NCN4 708 aa21.84■■□□□ 1.09
TPM4-208ENST00000588410 TCP11Q8WWU5 503 aa21.84■■□□□ 1.09
TPM4-208ENST00000588410 PSPC1Q8WXF1 523 aaKnown RBP21.84■■□□□ 1.09
TPM4-208ENST00000588410 TMEM143Q96AN5 459 aa21.84■■□□□ 1.09
TPM4-208ENST00000588410 HSD17B14Q9BPX1 270 aa21.84■■□□□ 1.09
TPM4-208ENST00000588410 TMEM60Q9H2L4 133 aa21.84■■□□□ 1.09
TPM4-208ENST00000588410 DHX33Q9H6R0 707 aaKnown RBP21.84■■□□□ 1.09
TPM4-208ENST00000588410 AAASQ9NRG9 546 aa21.84■■□□□ 1.09
TPM4-208ENST00000588410 BMP2KQ9NSY1 1161 aaPredicted RBP21.84■■□□□ 1.09
TPM4-208ENST00000588410 DACT1Q9NYF0 836 aa21.84■■□□□ 1.09
TPM4-208ENST00000588410 COL4A3BPQ9Y5P4 624 aa21.84■■□□□ 1.09
TPM4-208ENST00000588410 MCM2P49736 904 aa21.83■■□□□ 1.09
TPM4-208ENST00000588410 EMC2Q15006 297 aa21.83■■□□□ 1.09
TPM4-208ENST00000588410 NAALADL2Q58DX5 795 aa21.83■■□□□ 1.09
TPM4-208ENST00000588410 TTC38Q5R3I4 469 aa21.83■■□□□ 1.09
TPM4-208ENST00000588410 KSR1Q8IVT5 923 aa21.83■■□□□ 1.09
TPM4-208ENST00000588410 ABI1Q8IZP0 508 aa21.83■■□□□ 1.09
TPM4-208ENST00000588410 NSUN3Q9H649 340 aaKnown RBP21.83■■□□□ 1.09
TPM4-208ENST00000588410 CHST12Q9NRB3 414 aa21.83■■□□□ 1.09
TPM4-208ENST00000588410 ZBTB39O15060 712 aa21.82■■□□□ 1.08
TPM4-208ENST00000588410 GRM6O15303 877 aa21.82■■□□□ 1.08
TPM4-208ENST00000588410 LYPLA2O95372 231 aa21.82■■□□□ 1.08
TPM4-208ENST00000588410 OR52Z1P0C646 297 aa21.82■■□□□ 1.08
TPM4-208ENST00000588410 FGFR1P11362 822 aa21.82■■□□□ 1.08
TPM4-208ENST00000588410 TRAPPC10P48553 1259 aa21.82■■□□□ 1.08
TPM4-208ENST00000588410 CATSPER4Q7RTX7 472 aa21.82■■□□□ 1.08
TPM4-208ENST00000588410 ECHDC2Q86YB7 292 aa21.82■■□□□ 1.08
TPM4-208ENST00000588410 PRPF31Q8WWY3 499 aaKnown RBP21.82■■□□□ 1.08
TPM4-208ENST00000588410 P2RX5Q93086 422 aa21.82■■□□□ 1.08
TPM4-208ENST00000588410 TMX3Q96JJ7 454 aa21.82■■□□□ 1.08
TPM4-208ENST00000588410 MTRQ99707 1265 aa21.82■■□□□ 1.08
TPM4-208ENST00000588410 ANKEF1Q9NU02 776 aa21.82■■□□□ 1.08
TPM4-208ENST00000588410 PCDHB12Q9Y5F1 795 aa21.82■■□□□ 1.08
TPM4-208ENST00000588410 MYO9BQ13459 2157 aa21.81■■□□□ 1.08
TPM4-208ENST00000588410 POTEMA6NI47 508 aa21.81■■□□□ 1.08
TPM4-208ENST00000588410 ASAP2O43150 1006 aa21.81■■□□□ 1.08
TPM4-208ENST00000588410 SRGAP2CP0DJJ0 459 aa21.81■■□□□ 1.08
TPM4-208ENST00000588410 ERMNQ8TAM6 284 aa21.81■■□□□ 1.08
TPM4-208ENST00000588410 ADAMTS19Q8TE59 1207 aa21.81■■□□□ 1.08
TPM4-208ENST00000588410 TBC1D32Q96NH3 1257 aa21.81■■□□□ 1.08
TPM4-208ENST00000588410 TMEM117Q9H0C3 514 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms