RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 CEP89Q96ST8 783 aa16.14■□□□□ 0.17
VMP1-206ENST00000587945 LRFN3Q9BTN0 628 aa16.14■□□□□ 0.17
VMP1-206ENST00000587945 NIFKQ9BYG3 293 aaKnown RBP16.14■□□□□ 0.17
VMP1-206ENST00000587945 RNF19AQ9NV58 838 aa16.14■□□□□ 0.17
VMP1-206ENST00000587945 PPP4R2Q9NY27 417 aa16.14■□□□□ 0.17
VMP1-206ENST00000587945 PCDHB12Q9Y5F1 795 aa16.14■□□□□ 0.17
VMP1-206ENST00000587945 CCDC194A0A1B0GVG4 234 aa16.13■□□□□ 0.17
VMP1-206ENST00000587945 DDX11L8A8MPP1 907 aa16.13■□□□□ 0.17
VMP1-206ENST00000587945 PI4K2BG5E9Z4 385 aa16.13■□□□□ 0.17
VMP1-206ENST00000587945 EML1O00423 815 aa16.13■□□□□ 0.17
VMP1-206ENST00000587945 ZSCAN20P17040 1043 aaPredicted RBP16.13■□□□□ 0.17
VMP1-206ENST00000587945 NRIP1P48552 1158 aa16.13■□□□□ 0.17
VMP1-206ENST00000587945 AK2P54819 239 aa16.13■□□□□ 0.17
VMP1-206ENST00000587945 ADAM15Q13444 863 aa16.13■□□□□ 0.17
VMP1-206ENST00000587945 TMEM31Q5JXX7 168 aa16.13■□□□□ 0.17
VMP1-206ENST00000587945 FAM43BQ6ZT52 329 aaPredicted RBP16.13■□□□□ 0.17
VMP1-206ENST00000587945 FAM177A1Q8N128 213 aaPredicted RBP16.13■□□□□ 0.17
VMP1-206ENST00000587945 NECAB1Q8N987 351 aa16.13■□□□□ 0.17
VMP1-206ENST00000587945 COLGALT1Q8NBJ5 622 aa16.13■□□□□ 0.17
VMP1-206ENST00000587945 RNF169Q8NCN4 708 aa16.13■□□□□ 0.17
VMP1-206ENST00000587945 CASD1Q96PB1 797 aa16.13■□□□□ 0.17
VMP1-206ENST00000587945 CWH43Q9H720 699 aa16.13■□□□□ 0.17
VMP1-206ENST00000587945 ELAC1Q9H777 363 aaKnown RBP16.13■□□□□ 0.17
VMP1-206ENST00000587945 C11orf16Q9NQ32 467 aa16.13■□□□□ 0.17
VMP1-206ENST00000587945 RNF216Q9NWF9 866 aaPredicted RBP16.13■□□□□ 0.17
VMP1-206ENST00000587945 FGF18O76093 207 aa16.12■□□□□ 0.17
VMP1-206ENST00000587945 NDUFV1P49821 464 aa16.12■□□□□ 0.17
VMP1-206ENST00000587945 ZP2Q05996 745 aa16.12■□□□□ 0.17
VMP1-206ENST00000587945 EARS2Q5JPH6 523 aaKnown RBP16.12■□□□□ 0.17
VMP1-206ENST00000587945 PLA2G4FQ68DD2 849 aa16.12■□□□□ 0.17
VMP1-206ENST00000587945 LRRC55Q6ZSA7 311 aa16.12■□□□□ 0.17
VMP1-206ENST00000587945 PIK3AP1Q6ZUJ8 805 aa16.12■□□□□ 0.17
VMP1-206ENST00000587945 ECHDC2Q86YB7 292 aa16.12■□□□□ 0.17
VMP1-206ENST00000587945 THNSL1Q8IYQ7 743 aa16.12■□□□□ 0.17
VMP1-206ENST00000587945 MICAL1Q8TDZ2 1067 aa16.12■□□□□ 0.17
VMP1-206ENST00000587945 TMEM117Q9H0C3 514 aa16.12■□□□□ 0.17
VMP1-206ENST00000587945 AAASQ9NRG9 546 aa16.12■□□□□ 0.17
VMP1-206ENST00000587945 ORC3Q9UBD5 711 aaPredicted RBP16.12■□□□□ 0.17
VMP1-206ENST00000587945 VAV3Q9UKW4 847 aa16.12■□□□□ 0.17
VMP1-206ENST00000587945 FAM50BQ9Y247 325 aa16.12■□□□□ 0.17
VMP1-206ENST00000587945 STK36Q9NRP7 1315 aa16.12■□□□□ 0.17
VMP1-206ENST00000587945 IGKV6-21A0A0C4DH24 114 aa16.11■□□□□ 0.17
VMP1-206ENST00000587945 FAM205CA6NFA0 338 aa16.11■□□□□ 0.17
VMP1-206ENST00000587945 PER2O15055 1255 aa16.11■□□□□ 0.17
VMP1-206ENST00000587945 MBTPS2O43462 519 aa16.11■□□□□ 0.17
VMP1-206ENST00000587945 CCNT1O60563 726 aaKnown RBP16.11■□□□□ 0.17
VMP1-206ENST00000587945 PBX3P40426 434 aa16.11■□□□□ 0.17
VMP1-206ENST00000587945 ERVFC1P60507 584 aa16.11■□□□□ 0.17
VMP1-206ENST00000587945 PSMC5P62195 406 aa16.11■□□□□ 0.17
VMP1-206ENST00000587945 ANO5Q75V66 913 aa16.11■□□□□ 0.17
VMP1-206ENST00000587945 NEK8Q86SG6 692 aa16.11■□□□□ 0.17
VMP1-206ENST00000587945 KSR1Q8IVT5 923 aa16.11■□□□□ 0.17
VMP1-206ENST00000587945 ZNF710Q8N1W2 664 aa16.11■□□□□ 0.17
VMP1-206ENST00000587945 PPP2R3CQ969Q6 453 aa16.11■□□□□ 0.17
VMP1-206ENST00000587945 KCNMB3Q9NPA1 279 aa16.11■□□□□ 0.17
VMP1-206ENST00000587945 CLEC1BQ9P126 229 aa16.11■□□□□ 0.17
VMP1-206ENST00000587945 SUCLA2Q9P2R7 463 aaPredicted RBP16.11■□□□□ 0.17
VMP1-206ENST00000587945 CD207Q9UJ71 328 aa16.11■□□□□ 0.17
VMP1-206ENST00000587945 RALGAPA2Q2PPJ7 1873 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 NLRC5Q86WI3 1866 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 A0A087WZ62 844 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 LARGE1O95461 756 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 GLP2RO95838 553 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 FDPSP14324 419 aaKnown RBP16.1■□□□□ 0.17
VMP1-206ENST00000587945 XBP1P17861 261 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 NPEPPSP55786 919 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 ANAPC15P60006 121 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 RBM10P98175 930 aaKnown RBP16.1■□□□□ 0.17
VMP1-206ENST00000587945 NR5A1Q13285 461 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 PPP2R5CQ13362 524 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 SMAD4Q13485 552 aaKnown RBP16.1■□□□□ 0.17
VMP1-206ENST00000587945 SMAD2Q15796 467 aaKnown RBP16.1■□□□□ 0.17
VMP1-206ENST00000587945 ME3Q16798 604 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 CLLU1OSQ5K130 101 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 PPP4R3AQ6IN85 833 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 RHPN2Q8IUC4 686 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 ADHFE1Q8IWW8 467 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 EFHBQ8N7U6 833 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 ZNF579Q8NAF0 562 aaKnown RBP16.1■□□□□ 0.17
VMP1-206ENST00000587945 HAS1Q92839 578 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 MSLNLQ96KJ4 702 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 FAM20AQ96MK3 541 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 FDXACB1Q9BRP7 624 aaPredicted RBP16.1■□□□□ 0.17
VMP1-206ENST00000587945 GCOM2Q9BZD3 368 aaPredicted RBP16.1■□□□□ 0.17
VMP1-206ENST00000587945 TLE6Q9H808 572 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 TLR9Q9NR96 1032 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 WRAP73Q9P2S5 460 aaPredicted RBP16.1■□□□□ 0.17
VMP1-206ENST00000587945 PRKAG3Q9UGI9 489 aa16.1■□□□□ 0.17
VMP1-206ENST00000587945 A0A0U1RQF3 1178 aa16.09■□□□□ 0.17
VMP1-206ENST00000587945 C19orf67A6NJJ6 358 aa16.09■□□□□ 0.17
VMP1-206ENST00000587945 HOXA2O43364 376 aa16.09■□□□□ 0.17
VMP1-206ENST00000587945 GPR37L1O60883 481 aa16.09■□□□□ 0.17
VMP1-206ENST00000587945 MAFO75444 373 aaPredicted RBP16.09■□□□□ 0.17
VMP1-206ENST00000587945 ATF7P17544 494 aaPredicted RBP16.09■□□□□ 0.17
VMP1-206ENST00000587945 LAG3P18627 525 aa16.09■□□□□ 0.17
VMP1-206ENST00000587945 QARSP47897 775 aaKnown RBP16.09■□□□□ 0.17
VMP1-206ENST00000587945 DNM2P50570 870 aa16.09■□□□□ 0.17
VMP1-206ENST00000587945 FOSBP53539 338 aa16.09■□□□□ 0.17
VMP1-206ENST00000587945 UBE3AQ05086 875 aa16.09■□□□□ 0.17
VMP1-206ENST00000587945 ANKRD1Q15327 319 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms