RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 FKBP1AP62942 108 aaKnown RBP20.18■□□□□ 0.82
DDX39A-206ENST00000587730 PPP2R2AP63151 447 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 APOBEC3HQ6NTF7 200 aaKnown RBP20.18■□□□□ 0.82
DDX39A-206ENST00000587730 CERS5Q8N5B7 392 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 EIF2AK1Q9BQI3 630 aaKnown RBP20.18■□□□□ 0.82
DDX39A-206ENST00000587730 AP1M1Q9BXS5 423 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 DDX47Q9H0S4 455 aaKnown RBP20.18■□□□□ 0.82
DDX39A-206ENST00000587730 SLC12A6Q9UHW9 1150 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 RASAL2Q9UJF2 1139 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 FRMD4BQ9Y2L6 1034 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 PFASO15067 1338 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 E7EVH7 732 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 MSH4O15457 936 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 TRAPPC3O43617 180 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 EVI5O60447 810 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 ZNF76P36508 570 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 DRG2P55039 364 aaKnown RBP20.18■□□□□ 0.82
DDX39A-206ENST00000587730 TCEAL1Q15170 157 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 UAP1Q16222 522 aaPredicted RBP20.18■□□□□ 0.82
DDX39A-206ENST00000587730 SYDE2Q5VT97 1194 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 BTNL9Q6UXG8 535 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 RHOT2Q8IXI1 618 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 UBLCP1Q8WVY7 318 aaPredicted RBP20.18■□□□□ 0.82
DDX39A-206ENST00000587730 CABS1Q96KC9 395 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 TMX4Q9H1E5 349 aaPredicted RBP20.18■□□□□ 0.82
DDX39A-206ENST00000587730 EHMT1Q9H9B1 1298 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 PARVGQ9HBI0 331 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 ODF2LQ9ULJ1 636 aa20.18■□□□□ 0.82
DDX39A-206ENST00000587730 GOLGA6L7A0A1B0GV03 622 aa20.17■□□□□ 0.82
DDX39A-206ENST00000587730 MIF4GDA9UHW6 222 aaKnown RBP20.17■□□□□ 0.82
DDX39A-206ENST00000587730 MEIS1O00470 390 aa20.17■□□□□ 0.82
DDX39A-206ENST00000587730 PPFIA2O75334 1257 aa20.17■□□□□ 0.82
DDX39A-206ENST00000587730 FMO5P49326 533 aa20.17■□□□□ 0.82
DDX39A-206ENST00000587730 ICA1Q05084 483 aa20.17■□□□□ 0.82
DDX39A-206ENST00000587730 ODF2Q5BJF6 829 aa20.17■□□□□ 0.82
DDX39A-206ENST00000587730 RINT1Q6NUQ1 792 aa20.17■□□□□ 0.82
DDX39A-206ENST00000587730 IPO4Q8TEX9 1081 aaKnown RBP20.17■□□□□ 0.82
DDX39A-206ENST00000587730 CENPTQ96BT3 561 aa20.17■□□□□ 0.82
DDX39A-206ENST00000587730 RUNDC3BQ96NL0 473 aa20.17■□□□□ 0.82
DDX39A-206ENST00000587730 IDI2Q9BXS1 227 aa20.17■□□□□ 0.82
DDX39A-206ENST00000587730 FAM129AQ9BZQ8 928 aa20.17■□□□□ 0.82
DDX39A-206ENST00000587730 PARP2Q9UGN5 583 aa20.17■□□□□ 0.82
DDX39A-206ENST00000587730 PCDHB13Q9Y5F0 798 aa20.17■□□□□ 0.82
DDX39A-206ENST00000587730 FAM86B1E9PN63 330 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 F8W031 263 aaPredicted RBP20.16■□□□□ 0.82
DDX39A-206ENST00000587730 TGFB1I1O43294 461 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 FAM86B2P0C5J1 330 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 SLC27A3Q5K4L6 730 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 TATDN1Q6P1N9 297 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 SLC9A9Q8IVB4 645 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 MORC4Q8TE76 937 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 FMO2Q99518 471 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 RUSC1Q9BVN2 902 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 AMACRQ9UHK6 382 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 CAPN7Q9Y6W3 813 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 ANKRD62A6NC57 917 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 MYO1FO00160 1098 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 DAPK3O43293 454 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 GGPS1O95749 300 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 HPDP32754 393 aaPredicted RBP20.16■□□□□ 0.82
DDX39A-206ENST00000587730 FNTAP49354 379 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 POU5F1Q01860 360 aaKnown RBP20.16■□□□□ 0.82
DDX39A-206ENST00000587730 PPATQ06203 517 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 TRADDQ15628 312 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 MYCT1Q8N699 235 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 CYFIP2Q96F07 1278 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 HSD17B14Q9BPX1 270 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 SYT11Q9BT88 431 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 CENPHQ9H3R5 247 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 DNAJC12Q9UKB3 198 aa20.16■□□□□ 0.82
DDX39A-206ENST00000587730 FRMPD4Q14CM0 1322 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 SYNGAP1Q96PV0 1343 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 RGPD3A6NKT7 1758 aaPredicted RBP20.15■□□□□ 0.82
DDX39A-206ENST00000587730 RGPD4Q7Z3J3 1758 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 C5orf60A6NFR6 353 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 F5H6K3 240 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 G3V3G9 751 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 BUB1BO60566 1050 aaPredicted RBP20.15■□□□□ 0.82
DDX39A-206ENST00000587730 BCRP11274 1271 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 HNRNPH1P31943 449 aaKnown RBP20.15■□□□□ 0.82
DDX39A-206ENST00000587730 CRKP46108 304 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 CASP4P49662 377 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 ZNF131P52739 623 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 KLRC3Q07444 240 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 ACTN3Q08043 901 aaPredicted RBP20.15■□□□□ 0.82
DDX39A-206ENST00000587730 DHX9Q08211 1270 aaKnown RBP20.15■□□□□ 0.82
DDX39A-206ENST00000587730 DDR1Q08345 913 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 CETN1Q12798 172 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 PPP2R5CQ13362 524 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 ALCAMQ13740 583 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 DCAF8Q5TAQ9 597 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 C11orf63Q6NUN7 778 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 C6orf89Q6UWU4 347 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 CCDC121Q6ZUS5 278 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 SLC35G2Q8TBE7 412 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 PSMD1Q99460 953 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 RABEP2Q9H5N1 569 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 VCPKMTQ9H867 229 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 DMAC2Q9NW81 257 aa20.15■□□□□ 0.82
DDX39A-206ENST00000587730 APEX2Q9UBZ4 518 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms