RNA–Protein interactions for RNA: ENST00000587539.1

ZNF404-202, Transcript of zinc finger protein 404, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF404, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404-202ENST00000587539 UBE2R2Q712K3 238 aaPredicted RBP3.68□□□□□ -1.82
ZNF404-202ENST00000587539 CXXC5Q7LFL8 322 aaKnown RBP3.68□□□□□ -1.82
ZNF404-202ENST00000587539 UBXN4Q92575 508 aa3.68□□□□□ -1.82
ZNF404-202ENST00000587539 ZG16BQ96DA0 208 aa3.68□□□□□ -1.82
ZNF404-202ENST00000587539 SCYL1Q96KG9 808 aa3.68□□□□□ -1.82
ZNF404-202ENST00000587539 RPL10LQ96L21 214 aaKnown RBP3.68□□□□□ -1.82
ZNF404-202ENST00000587539 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
ZNF404-202ENST00000587539 FBXO10Q9UK96 956 aa3.68□□□□□ -1.82
ZNF404-202ENST00000587539 B4E1Z4 1266 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 H7C1D1 291 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 COMTP21964 271 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 MSX2P35548 267 aaPredicted RBP3.67□□□□□ -1.82
ZNF404-202ENST00000587539 SELENOPP49908 381 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 ALDH6A1Q02252 535 aaKnown RBP3.67□□□□□ -1.82
ZNF404-202ENST00000587539 ZNF174Q15697 407 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 TMEM200BQ69YZ2 307 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 CC2D1AQ6P1N0 951 aaPredicted RBP3.67□□□□□ -1.82
ZNF404-202ENST00000587539 OTOP1Q7RTM1 612 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 GPR135Q8IZ08 494 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 BCL6BQ8N143 479 aaPredicted RBP3.67□□□□□ -1.82
ZNF404-202ENST00000587539 CFHR4Q92496 578 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 EXTL1Q92935 676 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 ELF4Q99607 663 aaPredicted RBP3.67□□□□□ -1.82
ZNF404-202ENST00000587539 OR10A2Q9H208 303 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 TOMM22Q9NS69 142 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 FANCLQ9NW38 375 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 TMEM260Q9NX78 707 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 RBM8AQ9Y5S9 174 aaKnown RBP3.67□□□□□ -1.82
ZNF404-202ENST00000587539 MRPL42Q9Y6G3 142 aaKnown RBP3.67□□□□□ -1.82
ZNF404-202ENST00000587539 UBA6A0AVT1 1052 aaPredicted RBP3.67□□□□□ -1.82
ZNF404-202ENST00000587539 ZNF891A8MT65 544 aaPredicted RBP3.67□□□□□ -1.82
ZNF404-202ENST00000587539 NPTXRO95502 500 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 PRLP01236 227 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 FBLP22087 321 aaKnown RBP3.67□□□□□ -1.82
ZNF404-202ENST00000587539 FOXL1Q12952 345 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 SAFB2Q14151 953 aaKnown RBP eCLIP3.67□□□□□ -1.82
ZNF404-202ENST00000587539 PRKD1Q15139 912 aaPredicted RBP3.67□□□□□ -1.82
ZNF404-202ENST00000587539 ARHGAP44Q17R89 818 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 KRTAP15-1Q3LI76 137 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 NRN1LQ496H8 165 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 USP39Q53GS9 565 aaKnown RBP3.67□□□□□ -1.82
ZNF404-202ENST00000587539 HS1BP3Q53T59 392 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 SLFN12LQ6IEE8 588 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 UNQ6494/PRO21346Q6UXR6 183 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 DHX37Q8IY37 1157 aaKnown RBP3.67□□□□□ -1.82
ZNF404-202ENST00000587539 NTN5Q8WTR8 489 aaPredicted RBP3.67□□□□□ -1.82
ZNF404-202ENST00000587539 RTF1Q92541 710 aaKnown RBP3.67□□□□□ -1.82
ZNF404-202ENST00000587539 ZNF341Q9BYN7 854 aa3.67□□□□□ -1.82
ZNF404-202ENST00000587539 AGO3Q9H9G7 860 aaKnown RBP3.67□□□□□ -1.82
ZNF404-202ENST00000587539 LCHNA4D1U4 455 aa3.66□□□□□ -1.82
ZNF404-202ENST00000587539 CBX4O00257 560 aa3.66□□□□□ -1.82
ZNF404-202ENST00000587539 PLSCR1O15162 318 aa3.66□□□□□ -1.82
ZNF404-202ENST00000587539 FLT3P36888 993 aa3.66□□□□□ -1.82
ZNF404-202ENST00000587539 DGCR2P98153 550 aa3.66□□□□□ -1.82
ZNF404-202ENST00000587539 GRM7Q14831 915 aa3.66□□□□□ -1.82
ZNF404-202ENST00000587539 Q6ZSN1 163 aa3.66□□□□□ -1.82
ZNF404-202ENST00000587539 SGMS1Q86VZ5 419 aa3.66□□□□□ -1.82
ZNF404-202ENST00000587539 ZNF808Q8N4W9 903 aaPredicted RBP3.66□□□□□ -1.82
ZNF404-202ENST00000587539 ZNF764Q96H86 408 aaPredicted RBP3.66□□□□□ -1.82
ZNF404-202ENST00000587539 POFUT1Q9H488 388 aa3.66□□□□□ -1.82
ZNF404-202ENST00000587539 ACSS2Q9NR19 701 aa3.66□□□□□ -1.82
ZNF404-202ENST00000587539 IFT57Q9NWB7 429 aa3.66□□□□□ -1.82
ZNF404-202ENST00000587539 OXSMQ9NWU1 459 aa3.66□□□□□ -1.82
ZNF404-202ENST00000587539 THG1LQ9NWX6 298 aaKnown RBP3.66□□□□□ -1.82
ZNF404-202ENST00000587539 PLA2G3Q9NZ20 509 aa3.66□□□□□ -1.82
ZNF404-202ENST00000587539 SAE1Q9UBE0 346 aaPredicted RBP3.66□□□□□ -1.82
ZNF404-202ENST00000587539 B4GALT6Q9UBX8 382 aa3.66□□□□□ -1.82
ZNF404-202ENST00000587539 DNAI1Q9UI46 699 aa3.66□□□□□ -1.82
ZNF404-202ENST00000587539 DENND2AQ9ULE3 1009 aa3.66□□□□□ -1.82
ZNF404-202ENST00000587539 GOLGA8BA8MQT2 603 aa3.65□□□□□ -1.82
ZNF404-202ENST00000587539 RAD17O75943 681 aa3.65□□□□□ -1.82
ZNF404-202ENST00000587539 ATP2A2P16615 1042 aaKnown RBP3.65□□□□□ -1.82
ZNF404-202ENST00000587539 HIBADHP31937 336 aaKnown RBP3.65□□□□□ -1.82
ZNF404-202ENST00000587539 INHBCP55103 352 aa3.65□□□□□ -1.82
ZNF404-202ENST00000587539 ROM1Q03395 351 aa3.65□□□□□ -1.82
ZNF404-202ENST00000587539 HGFACQ04756 655 aa3.65□□□□□ -1.82
ZNF404-202ENST00000587539 MAP3K12Q12852 859 aa3.65□□□□□ -1.82
ZNF404-202ENST00000587539 PCBP1Q15365 356 aaKnown RBP eCLIP3.65□□□□□ -1.82
ZNF404-202ENST00000587539 TTC38Q5R3I4 469 aa3.65□□□□□ -1.82
ZNF404-202ENST00000587539 ESRP1Q6NXG1 681 aaKnown RBP3.65□□□□□ -1.82
ZNF404-202ENST00000587539 LRRTM3Q86VH5 581 aa3.65□□□□□ -1.82
ZNF404-202ENST00000587539 ANKRD53Q8N9V6 530 aa3.65□□□□□ -1.82
ZNF404-202ENST00000587539 SHCBP1Q8NEM2 672 aa3.65□□□□□ -1.82
ZNF404-202ENST00000587539 CHTF18Q8WVB6 975 aa3.65□□□□□ -1.82
ZNF404-202ENST00000587539 FOXB1Q99853 325 aa3.65□□□□□ -1.82
ZNF404-202ENST00000587539 MYL10Q9BUA6 226 aa3.65□□□□□ -1.82
ZNF404-202ENST00000587539 CSRNP2Q9H175 543 aa3.65□□□□□ -1.82
ZNF404-202ENST00000587539 ZKSCAN5Q9Y2L8 839 aa3.65□□□□□ -1.82
ZNF404-202ENST00000587539 C2orf78A6NCI8 922 aa3.64□□□□□ -1.83
ZNF404-202ENST00000587539 HNRNPLP14866 589 aaKnown RBP eCLIP3.64□□□□□ -1.83
ZNF404-202ENST00000587539 DUSP8Q13202 625 aa3.64□□□□□ -1.83
ZNF404-202ENST00000587539 TCEA2Q15560 299 aa3.64□□□□□ -1.83
ZNF404-202ENST00000587539 HOMER1Q86YM7 354 aa3.64□□□□□ -1.83
ZNF404-202ENST00000587539 C1orf210Q8IVY1 113 aa3.64□□□□□ -1.83
ZNF404-202ENST00000587539 GCDHQ92947 438 aaPredicted RBP3.64□□□□□ -1.83
ZNF404-202ENST00000587539 MAML3Q96JK9 1138 aa3.64□□□□□ -1.83
ZNF404-202ENST00000587539 C16orf92Q96LL3 132 aa3.64□□□□□ -1.83
ZNF404-202ENST00000587539 GPR101Q96P66 508 aaPredicted RBP3.64□□□□□ -1.83
ZNF404-202ENST00000587539 MTFR1LQ9H019 292 aa3.64□□□□□ -1.83
ZNF404-202ENST00000587539 SEMA4AQ9H3S1 761 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms