RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 NLRP4Q96MN2 994 aa16.54■□□□□ 0.24
ATG4D-207ENST00000587256 GCOM2Q9BZD3 368 aaPredicted RBP16.54■□□□□ 0.24
ATG4D-207ENST00000587256 RAB34Q9BZG1 259 aa16.54■□□□□ 0.24
ATG4D-207ENST00000587256 DHX33Q9H6R0 707 aaKnown RBP16.54■□□□□ 0.24
ATG4D-207ENST00000587256 TUFT1Q9NNX1 390 aa16.54■□□□□ 0.24
ATG4D-207ENST00000587256 FOXD4L1Q9NU39 408 aa16.54■□□□□ 0.24
ATG4D-207ENST00000587256 ADGRA3Q8IWK6 1321 aa16.53■□□□□ 0.24
ATG4D-207ENST00000587256 GAS2O43903 313 aaKnown RBP16.53■□□□□ 0.24
ATG4D-207ENST00000587256 STAG3L1P0CL83 205 aa16.53■□□□□ 0.24
ATG4D-207ENST00000587256 POTEGQ6S5H5 508 aa16.53■□□□□ 0.24
ATG4D-207ENST00000587256 FAM43BQ6ZT52 329 aaPredicted RBP16.53■□□□□ 0.24
ATG4D-207ENST00000587256 SPRED2Q7Z698 418 aa16.53■□□□□ 0.24
ATG4D-207ENST00000587256 ZNF410Q86VK4 478 aa16.53■□□□□ 0.24
ATG4D-207ENST00000587256 NPAS4Q8IUM7 802 aa16.53■□□□□ 0.24
ATG4D-207ENST00000587256 HSCBQ8IWL3 235 aa16.53■□□□□ 0.24
ATG4D-207ENST00000587256 C4orf32Q8N8J7 132 aa16.53■□□□□ 0.24
ATG4D-207ENST00000587256 SP7Q8TDD2 431 aaPredicted RBP16.53■□□□□ 0.24
ATG4D-207ENST00000587256 PIGOQ8TEQ8 1089 aa16.53■□□□□ 0.24
ATG4D-207ENST00000587256 TCP11Q8WWU5 503 aa16.53■□□□□ 0.24
ATG4D-207ENST00000587256 PSPC1Q8WXF1 523 aaKnown RBP16.53■□□□□ 0.24
ATG4D-207ENST00000587256 TMEM143Q96AN5 459 aa16.53■□□□□ 0.24
ATG4D-207ENST00000587256 INTS4Q96HW7 963 aaKnown RBP16.53■□□□□ 0.24
ATG4D-207ENST00000587256 TGS1Q96RS0 853 aaKnown RBP16.53■□□□□ 0.24
ATG4D-207ENST00000587256 MTRQ99707 1265 aa16.53■□□□□ 0.24
ATG4D-207ENST00000587256 ADAM2Q99965 735 aa16.53■□□□□ 0.24
ATG4D-207ENST00000587256 POLR3CQ9BUI4 534 aaPredicted RBP16.53■□□□□ 0.24
ATG4D-207ENST00000587256 ATP6V0A4Q9HBG4 840 aa16.53■□□□□ 0.24
ATG4D-207ENST00000587256 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.53■□□□□ 0.24
ATG4D-207ENST00000587256 C1orf112Q9NSG2 853 aa16.53■□□□□ 0.24
ATG4D-207ENST00000587256 ANKEF1Q9NU02 776 aa16.53■□□□□ 0.24
ATG4D-207ENST00000587256 LRWD1Q9UFC0 647 aa16.53■□□□□ 0.24
ATG4D-207ENST00000587256 LRFN2Q9ULH4 789 aa16.53■□□□□ 0.24
ATG4D-207ENST00000587256 COL4A3BPQ9Y5P4 624 aa16.53■□□□□ 0.24
ATG4D-207ENST00000587256 COL4A4P53420 1690 aaPredicted RBP16.53■□□□□ 0.24
ATG4D-207ENST00000587256 A0A087WZ62 844 aa16.52■□□□□ 0.24
ATG4D-207ENST00000587256 MGEA5O60502 916 aa16.52■□□□□ 0.24
ATG4D-207ENST00000587256 MED24O75448 989 aa16.52■□□□□ 0.24
ATG4D-207ENST00000587256 DGAT1O75907 488 aa16.52■□□□□ 0.24
ATG4D-207ENST00000587256 SPATA31C1P0DKV0 1188 aa16.52■□□□□ 0.24
ATG4D-207ENST00000587256 SFPQP23246 707 aaKnown RBP eCLIP16.52■□□□□ 0.24
ATG4D-207ENST00000587256 CCT6AP40227 531 aaKnown RBP16.52■□□□□ 0.24
ATG4D-207ENST00000587256 BRAPQ7Z569 592 aa16.52■□□□□ 0.24
ATG4D-207ENST00000587256 RTN4RL1Q86UN2 441 aaPredicted RBP16.52■□□□□ 0.24
ATG4D-207ENST00000587256 FERMT3Q86UX7 667 aa16.52■□□□□ 0.24
ATG4D-207ENST00000587256 CATSPER3Q86XQ3 398 aa16.52■□□□□ 0.24
ATG4D-207ENST00000587256 KSR1Q8IVT5 923 aa16.52■□□□□ 0.24
ATG4D-207ENST00000587256 FDXACB1Q9BRP7 624 aaPredicted RBP16.52■□□□□ 0.24
ATG4D-207ENST00000587256 EPOPA6NHQ4 379 aa16.51■□□□□ 0.23
ATG4D-207ENST00000587256 RFXAPO00287 272 aa16.51■□□□□ 0.23
ATG4D-207ENST00000587256 USO1O60763 962 aaKnown RBP16.51■□□□□ 0.23
ATG4D-207ENST00000587256 CSDE1O75534 798 aaKnown RBP16.51■□□□□ 0.23
ATG4D-207ENST00000587256 ZSCAN20P17040 1043 aaPredicted RBP16.51■□□□□ 0.23
ATG4D-207ENST00000587256 FGFR4P22455 802 aa16.51■□□□□ 0.23
ATG4D-207ENST00000587256 RPA1P27694 616 aa16.51■□□□□ 0.23
ATG4D-207ENST00000587256 PRPHP41219 470 aa16.51■□□□□ 0.23
ATG4D-207ENST00000587256 SARSP49591 514 aaKnown RBP16.51■□□□□ 0.23
ATG4D-207ENST00000587256 RARRES1P49788 294 aa16.51■□□□□ 0.23
ATG4D-207ENST00000587256 ADGRE1Q14246 886 aa16.51■□□□□ 0.23
ATG4D-207ENST00000587256 DTHD1Q6ZMT9 781 aa16.51■□□□□ 0.23
ATG4D-207ENST00000587256 SLC24A5Q71RS6 500 aa16.51■□□□□ 0.23
ATG4D-207ENST00000587256 FIBCD1Q8N539 461 aa16.51■□□□□ 0.23
ATG4D-207ENST00000587256 SNX29Q8TEQ0 813 aa16.51■□□□□ 0.23
ATG4D-207ENST00000587256 GDPD5Q8WTR4 605 aa16.51■□□□□ 0.23
ATG4D-207ENST00000587256 PRPF31Q8WWY3 499 aaKnown RBP16.51■□□□□ 0.23
ATG4D-207ENST00000587256 NACC1Q96RE7 527 aa16.51■□□□□ 0.23
ATG4D-207ENST00000587256 INO80BQ9C086 356 aaPredicted RBP16.51■□□□□ 0.23
ATG4D-207ENST00000587256 RGS18Q9NS28 235 aa16.51■□□□□ 0.23
ATG4D-207ENST00000587256 RNF216Q9NWF9 866 aaPredicted RBP16.51■□□□□ 0.23
ATG4D-207ENST00000587256 STK24Q9Y6E0 443 aa16.51■□□□□ 0.23
ATG4D-207ENST00000587256 CHD7Q9P2D1 2997 aa16.51■□□□□ 0.23
ATG4D-207ENST00000587256 MYO9BQ13459 2157 aa16.51■□□□□ 0.23
ATG4D-207ENST00000587256 TTC3P53804 2025 aa16.5■□□□□ 0.23
ATG4D-207ENST00000587256 A0A087WWV3 80 aa16.5■□□□□ 0.23
ATG4D-207ENST00000587256 GTPBP6O43824 516 aaPredicted RBP16.5■□□□□ 0.23
ATG4D-207ENST00000587256 HSP90AA1P07900 732 aaKnown RBP16.5■□□□□ 0.23
ATG4D-207ENST00000587256 ERVK-21P61565 698 aa16.5■□□□□ 0.23
ATG4D-207ENST00000587256 ATP2C1P98194 919 aaPredicted RBP16.5■□□□□ 0.23
ATG4D-207ENST00000587256 LAMTOR4Q0VGL1 99 aa16.5■□□□□ 0.23
ATG4D-207ENST00000587256 BTG3Q14201 252 aaPredicted RBP16.5■□□□□ 0.23
ATG4D-207ENST00000587256 MICALL1Q8N3F8 863 aa16.5■□□□□ 0.23
ATG4D-207ENST00000587256 IGSF22Q8N9C0 903 aa16.5■□□□□ 0.23
ATG4D-207ENST00000587256 FBXO22Q8NEZ5 403 aa16.5■□□□□ 0.23
ATG4D-207ENST00000587256 SNX21Q969T3 373 aa16.5■□□□□ 0.23
ATG4D-207ENST00000587256 C17orf80Q9BSJ5 609 aa16.5■□□□□ 0.23
ATG4D-207ENST00000587256 RC3H2Q9HBD1 1191 aaKnown RBP16.5■□□□□ 0.23
ATG4D-207ENST00000587256 XPNPEP1Q9NQW7 623 aa16.5■□□□□ 0.23
ATG4D-207ENST00000587256 PCDHB7Q9Y5E2 793 aa16.5■□□□□ 0.23
ATG4D-207ENST00000587256 ARHGEF35A5YM69 484 aa16.49■□□□□ 0.23
ATG4D-207ENST00000587256 DGKIO75912 1065 aa16.49■□□□□ 0.23
ATG4D-207ENST00000587256 SRGAP2CP0DJJ0 459 aa16.49■□□□□ 0.23
ATG4D-207ENST00000587256 XRCC6P12956 609 aaKnown RBP eCLIP16.49■□□□□ 0.23
ATG4D-207ENST00000587256 SYT1P21579 422 aa16.49■□□□□ 0.23
ATG4D-207ENST00000587256 PHKA2P46019 1235 aa16.49■□□□□ 0.23
ATG4D-207ENST00000587256 TFDP1Q14186 410 aa16.49■□□□□ 0.23
ATG4D-207ENST00000587256 PDIA5Q14554 519 aa16.49■□□□□ 0.23
ATG4D-207ENST00000587256 DSC3Q14574 896 aa16.49■□□□□ 0.23
ATG4D-207ENST00000587256 PAN2Q504Q3 1202 aaKnown RBP16.49■□□□□ 0.23
ATG4D-207ENST00000587256 KRT79Q5XKE5 535 aa16.49■□□□□ 0.23
ATG4D-207ENST00000587256 CATSPER4Q7RTX7 472 aa16.49■□□□□ 0.23
ATG4D-207ENST00000587256 PPM1EQ8WY54 764 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms