RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 ASAP2O43150 1006 aa15.1■□□□□ 0.01
VMP1-203ENST00000586245 HIP1RO75146 1068 aa15.1■□□□□ 0.01
VMP1-203ENST00000586245 CAND2O75155 1236 aa15.1■□□□□ 0.01
VMP1-203ENST00000586245 TBCAO75347 108 aaKnown RBP15.1■□□□□ 0.01
VMP1-203ENST00000586245 MBD3O95983 291 aa15.1■□□□□ 0.01
VMP1-203ENST00000586245 THPOP40225 353 aa15.1■□□□□ 0.01
VMP1-203ENST00000586245 CDC42EP1Q00587 391 aa15.1■□□□□ 0.01
VMP1-203ENST00000586245 MXD4Q14582 209 aaPredicted RBP15.1■□□□□ 0.01
VMP1-203ENST00000586245 DYMQ7RTS9 669 aa15.1■□□□□ 0.01
VMP1-203ENST00000586245 RPAINQ86UA6 219 aa15.1■□□□□ 0.01
VMP1-203ENST00000586245 KIAA0319LQ8IZA0 1049 aa15.1■□□□□ 0.01
VMP1-203ENST00000586245 DHX38Q92620 1227 aaKnown RBP15.1■□□□□ 0.01
VMP1-203ENST00000586245 PAGE5Q96GU1 130 aa15.1■□□□□ 0.01
VMP1-203ENST00000586245 GPRC5CQ9NQ84 441 aa15.1■□□□□ 0.01
VMP1-203ENST00000586245 EVI5O60447 810 aa15.09■□□□□ 0.01
VMP1-203ENST00000586245 FAM13AO94988 1023 aa15.09■□□□□ 0.01
VMP1-203ENST00000586245 VTNP04004 478 aa15.09■□□□□ 0.01
VMP1-203ENST00000586245 MYL1P05976 194 aa15.09■□□□□ 0.01
VMP1-203ENST00000586245 ARL2P36404 184 aa15.09■□□□□ 0.01
VMP1-203ENST00000586245 CACNB1Q02641 598 aaPredicted RBP15.09■□□□□ 0.01
VMP1-203ENST00000586245 MKRN4PQ13434 485 aaPredicted RBP15.09■□□□□ 0.01
VMP1-203ENST00000586245 DRP2Q13474 957 aa15.09■□□□□ 0.01
VMP1-203ENST00000586245 GIT2Q14161 759 aa15.09■□□□□ 0.01
VMP1-203ENST00000586245 RHPN2Q8IUC4 686 aa15.09■□□□□ 0.01
VMP1-203ENST00000586245 GRAMD1CQ8IYS0 662 aa15.09■□□□□ 0.01
VMP1-203ENST00000586245 ZNF710Q8N1W2 664 aa15.09■□□□□ 0.01
VMP1-203ENST00000586245 PRPF31Q8WWY3 499 aaKnown RBP15.09■□□□□ 0.01
VMP1-203ENST00000586245 DPF3Q92784 378 aa15.09■□□□□ 0.01
VMP1-203ENST00000586245 WNT8BQ93098 351 aa15.09■□□□□ 0.01
VMP1-203ENST00000586245 IFT74Q96LB3 600 aa15.09■□□□□ 0.01
VMP1-203ENST00000586245 SCLT1Q96NL6 688 aa15.09■□□□□ 0.01
VMP1-203ENST00000586245 C7orf25Q9BPX7 421 aa15.09■□□□□ 0.01
VMP1-203ENST00000586245 REEP2Q9BRK0 252 aa15.09■□□□□ 0.01
VMP1-203ENST00000586245 TRIM9Q9C026 710 aa15.09■□□□□ 0.01
VMP1-203ENST00000586245 HIPK3Q9H422 1215 aa15.09■□□□□ 0.01
VMP1-203ENST00000586245 ZHX3Q9H4I2 956 aa15.09■□□□□ 0.01
VMP1-203ENST00000586245 PRDM5Q9NQX1 630 aaPredicted RBP15.09■□□□□ 0.01
VMP1-203ENST00000586245 PRKAG2Q9UGJ0 569 aa15.09■□□□□ 0.01
VMP1-203ENST00000586245 COL4A3BPQ9Y5P4 624 aa15.09■□□□□ 0.01
VMP1-203ENST00000586245 PITPNM1O00562 1244 aa15.08■□□□□ 0
VMP1-203ENST00000586245 CKBP12277 381 aa15.08■□□□□ 0
VMP1-203ENST00000586245 IDEP14735 1019 aa15.08■□□□□ 0
VMP1-203ENST00000586245 ASIC1P78348 528 aa15.08■□□□□ 0
VMP1-203ENST00000586245 MRPS6P82932 125 aaKnown RBP15.08■□□□□ 0
VMP1-203ENST00000586245 RBL2Q08999 1139 aa15.08■□□□□ 0
VMP1-203ENST00000586245 LAMTOR4Q0VGL1 99 aa15.08■□□□□ 0
VMP1-203ENST00000586245 TFDP1Q14186 410 aa15.08■□□□□ 0
VMP1-203ENST00000586245 PPP2R5AQ15172 486 aa15.08■□□□□ 0
VMP1-203ENST00000586245 TRIM71Q2Q1W2 868 aaKnown RBP15.08■□□□□ 0
VMP1-203ENST00000586245 SH3RF1Q7Z6J0 888 aa15.08■□□□□ 0
VMP1-203ENST00000586245 CCDC65Q8IXS2 484 aa15.08■□□□□ 0
VMP1-203ENST00000586245 C7orf61Q8IZ16 206 aa15.08■□□□□ 0
VMP1-203ENST00000586245 DNAJC19Q96DA6 116 aa15.08■□□□□ 0
VMP1-203ENST00000586245 NLRP4Q96MN2 994 aa15.08■□□□□ 0
VMP1-203ENST00000586245 BLZF1Q9H2G9 400 aa15.08■□□□□ 0
VMP1-203ENST00000586245 C17orf75Q9HAS0 396 aa15.08■□□□□ 0
VMP1-203ENST00000586245 POLD4Q9HCU8 107 aa15.08■□□□□ 0
VMP1-203ENST00000586245 LARSQ9P2J5 1176 aaKnown RBP15.08■□□□□ 0
VMP1-203ENST00000586245 KCNG1Q9UIX4 513 aa15.08■□□□□ 0
VMP1-203ENST00000586245 TBX21Q9UL17 535 aa15.08■□□□□ 0
VMP1-203ENST00000586245 TRIP12Q14669 1992 aaPredicted RBP15.07■□□□□ 0
VMP1-203ENST00000586245 RSPH10B2B2RC85 870 aa15.07■□□□□ 0
VMP1-203ENST00000586245 GTPBP6O43824 516 aaPredicted RBP15.07■□□□□ 0
VMP1-203ENST00000586245 CTSHP09668 335 aa15.07■□□□□ 0
VMP1-203ENST00000586245 RSPH10BP0C881 870 aa15.07■□□□□ 0
VMP1-203ENST00000586245 GLRA2P23416 452 aa15.07■□□□□ 0
VMP1-203ENST00000586245 GPC3P51654 580 aa15.07■□□□□ 0
VMP1-203ENST00000586245 NLRP11P59045 1033 aaKnown RBP15.07■□□□□ 0
VMP1-203ENST00000586245 TMEM62Q0P6H9 643 aa15.07■□□□□ 0
VMP1-203ENST00000586245 MAPK7Q13164 816 aa15.07■□□□□ 0
VMP1-203ENST00000586245 DMP1Q13316 513 aaPredicted RBP15.07■□□□□ 0
VMP1-203ENST00000586245 CUL4BQ13620 913 aa15.07■□□□□ 0
VMP1-203ENST00000586245 POSTNQ15063 836 aa15.07■□□□□ 0
VMP1-203ENST00000586245 KIZQ2M2Z5 673 aa15.07■□□□□ 0
VMP1-203ENST00000586245 ZNF618Q5T7W0 954 aa15.07■□□□□ 0
VMP1-203ENST00000586245 CNNM4Q6P4Q7 775 aa15.07■□□□□ 0
VMP1-203ENST00000586245 ZNF410Q86VK4 478 aa15.07■□□□□ 0
VMP1-203ENST00000586245 ELOA2Q8IYF1 753 aaPredicted RBP15.07■□□□□ 0
VMP1-203ENST00000586245 DAW1Q8N136 415 aa15.07■□□□□ 0
VMP1-203ENST00000586245 MYCT1Q8N699 235 aa15.07■□□□□ 0
VMP1-203ENST00000586245 GPT2Q8TD30 523 aa15.07■□□□□ 0
VMP1-203ENST00000586245 ASAP3Q8TDY4 903 aa15.07■□□□□ 0
VMP1-203ENST00000586245 NLRP7Q8WX94 980 aa15.07■□□□□ 0
VMP1-203ENST00000586245 CCDC47Q96A33 483 aaKnown RBP15.07■□□□□ 0
VMP1-203ENST00000586245 PPP1R16BQ96T49 567 aa15.07■□□□□ 0
VMP1-203ENST00000586245 NOC4LQ9BVI4 516 aaKnown RBP15.07■□□□□ 0
VMP1-203ENST00000586245 PPP1R12CQ9BZL4 782 aa15.07■□□□□ 0
VMP1-203ENST00000586245 PARVGQ9HBI0 331 aa15.07■□□□□ 0
VMP1-203ENST00000586245 GINS2Q9Y248 185 aa15.07■□□□□ 0
VMP1-203ENST00000586245 TRPV2Q9Y5S1 764 aa15.07■□□□□ 0
VMP1-203ENST00000586245 CDY2AQ9Y6F7 541 aa15.07■□□□□ 0
VMP1-203ENST00000586245 DNAH12Q6ZR08 3092 aa15.06■□□□□ 0
VMP1-203ENST00000586245 LRRIQ4A6NIV6 560 aa15.06■□□□□ 0
VMP1-203ENST00000586245 SFI1A8K8P3 1242 aa15.06■□□□□ 0
VMP1-203ENST00000586245 KIAA0355O15063 1070 aa15.06■□□□□ 0
VMP1-203ENST00000586245 SRGAP2CP0DJJ0 459 aa15.06■□□□□ 0
VMP1-203ENST00000586245 PLS3P13797 630 aa15.06■□□□□ 0
VMP1-203ENST00000586245 SELPP16109 830 aa15.06■□□□□ 0
VMP1-203ENST00000586245 GAP43P17677 238 aa15.06■□□□□ 0
VMP1-203ENST00000586245 CASP1P29466 404 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms