RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 SMC1AQ14683 1233 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 JAKMIP3Q5VZ66 844 aa12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 TYW1BQ6NUM6 668 aa12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 LLGL2Q6P1M3 1020 aa12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 DHX32Q7L7V1 743 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 UBALD2Q8IYN6 164 aa12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 VN1R2Q8NFZ6 395 aa12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 ATOH1Q92858 354 aaPredicted RBP12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 SCLT1Q96NL6 688 aa12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 PPP1R16BQ96T49 567 aa12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 MRPL9Q9BYD2 267 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 C6orf50Q9HD87 102 aa12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 NRBP2Q9NSY0 501 aa12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 DACT1Q9NYF0 836 aa12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 SAMM50Q9Y512 469 aa12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 ZDBF2Q9HCK1 2354 aa12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 ESYT2A0FGR8 921 aa12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 WDR64B1ANS9 1081 aa12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 FAM86B1E9PN63 330 aa12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 DHX15O43143 795 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 EOMESO95936 686 aa12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 HMGB1P09429 215 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 FAM86B2P0C5J1 330 aa12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 EIF4BP23588 611 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 GNA11P29992 359 aa12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 MTHFRP42898 656 aa12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 ALDH7A1P49419 539 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 NLRP11P59045 1033 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 FGD1P98174 961 aa12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 RBM10P98175 930 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 APOBRQ0VD83 1088 aa12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 MTMR3Q13615 1198 aa12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 KCNC3Q14003 757 aa12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 KRT32Q14532 448 aa12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 EFCAB12Q6NXP0 572 aa12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 TRMT1LQ7Z2T5 733 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 ECHDC2Q86YB7 292 aa12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 ASIC4Q96FT7 647 aa12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 RIPOR3Q96MK2 946 aa12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 CASD1Q96PB1 797 aa12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 ADAM7Q9H2U9 754 aa12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 GABBR1Q9UBS5 961 aa12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 NAP1L2Q9ULW6 460 aaPredicted RBP12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 SORCS3Q9UPU3 1222 aa12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 SNX14Q9Y5W7 946 aa12.12□□□□□ -0.47
CSNK1D-226ENST00000585026 IGLV3-22A0A075B6J6 115 aa12.11□□□□□ -0.47
CSNK1D-226ENST00000585026 ZBTB42B2RXF5 422 aa12.11□□□□□ -0.47
CSNK1D-226ENST00000585026 GFRA3O60609 400 aa12.11□□□□□ -0.47
CSNK1D-226ENST00000585026 ATP4AP20648 1035 aa12.11□□□□□ -0.47
CSNK1D-226ENST00000585026 CA8P35219 290 aa12.11□□□□□ -0.47
CSNK1D-226ENST00000585026 CLCN3P51790 818 aa12.11□□□□□ -0.47
CSNK1D-226ENST00000585026 EXOSC10Q01780 885 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-226ENST00000585026 AKAP17AQ02040 695 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-226ENST00000585026 FUT2Q10981 343 aa12.11□□□□□ -0.47
CSNK1D-226ENST00000585026 GIT2Q14161 759 aa12.11□□□□□ -0.47
CSNK1D-226ENST00000585026 PFKFB3Q16875 520 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-226ENST00000585026 SYCE2Q6PIF2 218 aa12.11□□□□□ -0.47
CSNK1D-226ENST00000585026 REXO1Q8N1G1 1221 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-226ENST00000585026 MRPL43Q8N983 215 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-226ENST00000585026 RNF169Q8NCN4 708 aa12.11□□□□□ -0.47
CSNK1D-226ENST00000585026 BICD2Q8TD16 824 aa12.11□□□□□ -0.47
CSNK1D-226ENST00000585026 TMEM169Q96HH4 297 aa12.11□□□□□ -0.47
CSNK1D-226ENST00000585026 PHOX2BQ99453 314 aa12.11□□□□□ -0.47
CSNK1D-226ENST00000585026 APOL5Q9BWW9 433 aa12.11□□□□□ -0.47
CSNK1D-226ENST00000585026 DZANK1Q9NVP4 752 aa12.11□□□□□ -0.47
CSNK1D-226ENST00000585026 HCSTQ9UBK5 93 aa12.11□□□□□ -0.47
CSNK1D-226ENST00000585026 A0A0U1RQF3 1178 aa12.1□□□□□ -0.47
CSNK1D-226ENST00000585026 KLF18A0A0U1RQI7 1052 aa12.1□□□□□ -0.47
CSNK1D-226ENST00000585026 HIDE1A8MVS5 230 aa12.1□□□□□ -0.47
CSNK1D-226ENST00000585026 CXCL14O95715 111 aa12.1□□□□□ -0.47
CSNK1D-226ENST00000585026 SKIP12755 728 aa12.1□□□□□ -0.47
CSNK1D-226ENST00000585026 SFNP31947 248 aa12.1□□□□□ -0.47
CSNK1D-226ENST00000585026 VCPP55072 806 aaKnown RBP12.1□□□□□ -0.47
CSNK1D-226ENST00000585026 ADCK5Q3MIX3 580 aa12.1□□□□□ -0.47
CSNK1D-226ENST00000585026 PRR16Q569H4 304 aa12.1□□□□□ -0.47
CSNK1D-226ENST00000585026 ATAT1Q5SQI0 421 aa12.1□□□□□ -0.47
CSNK1D-226ENST00000585026 LRRC55Q6ZSA7 311 aa12.1□□□□□ -0.47
CSNK1D-226ENST00000585026 PLCD3Q8N3E9 789 aa12.1□□□□□ -0.47
CSNK1D-226ENST00000585026 KREMEN2Q8NCW0 462 aa12.1□□□□□ -0.47
CSNK1D-226ENST00000585026 NLRP7Q8WX94 980 aa12.1□□□□□ -0.47
CSNK1D-226ENST00000585026 SNX27Q96L92 541 aa12.1□□□□□ -0.47
CSNK1D-226ENST00000585026 INO80BQ9C086 356 aaPredicted RBP12.1□□□□□ -0.47
CSNK1D-226ENST00000585026 ZMYND12Q9H0C1 365 aa12.1□□□□□ -0.47
CSNK1D-226ENST00000585026 ZSWIM6Q9HCJ5 1215 aa12.1□□□□□ -0.47
CSNK1D-226ENST00000585026 CHST12Q9NRB3 414 aa12.1□□□□□ -0.47
CSNK1D-226ENST00000585026 BRPF3Q9ULD4 1205 aa12.1□□□□□ -0.47
CSNK1D-226ENST00000585026 HCFC2Q9Y5Z7 792 aa12.1□□□□□ -0.47
CSNK1D-226ENST00000585026 C2orf71A6NGG8 1288 aa12.09□□□□□ -0.47
CSNK1D-226ENST00000585026 GALR2O43603 387 aaPredicted RBP12.09□□□□□ -0.47
CSNK1D-226ENST00000585026 OATP04181 439 aa12.09□□□□□ -0.47
CSNK1D-226ENST00000585026 DARSP14868 501 aaKnown RBP12.09□□□□□ -0.47
CSNK1D-226ENST00000585026 SP100P23497 879 aaPredicted RBP12.09□□□□□ -0.47
CSNK1D-226ENST00000585026 CIITAP33076 1130 aa12.09□□□□□ -0.47
CSNK1D-226ENST00000585026 MCM2P49736 904 aa12.09□□□□□ -0.47
CSNK1D-226ENST00000585026 DNM2P50570 870 aa12.09□□□□□ -0.47
CSNK1D-226ENST00000585026 METAP2P50579 478 aaKnown RBP eCLIP12.09□□□□□ -0.478e-7■□□□□ 9.4
CSNK1D-226ENST00000585026 JAK3P52333 1124 aa12.09□□□□□ -0.47
CSNK1D-226ENST00000585026 FOXK2Q01167 660 aa12.09□□□□□ -0.47
CSNK1D-226ENST00000585026 TBC1D8BQ0IIM8 1120 aa12.09□□□□□ -0.47
CSNK1D-226ENST00000585026 SLC39A11Q8N1S5 342 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms