RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 FAM228AQ86W67 206 aa18.14■□□□□ 0.49
ERBB2-222ENST00000584908 MYOCDQ8IZQ8 938 aa18.14■□□□□ 0.49
ERBB2-222ENST00000584908 XPNPEP1Q9NQW7 623 aa18.14■□□□□ 0.49
ERBB2-222ENST00000584908 SUCLA2Q9P2R7 463 aaPredicted RBP18.14■□□□□ 0.49
ERBB2-222ENST00000584908 DGAT1O75907 488 aa18.13■□□□□ 0.49
ERBB2-222ENST00000584908 BMP15O95972 392 aa18.13■□□□□ 0.49
ERBB2-222ENST00000584908 CA3P07451 260 aa18.13■□□□□ 0.49
ERBB2-222ENST00000584908 DARSP14868 501 aaKnown RBP18.13■□□□□ 0.49
ERBB2-222ENST00000584908 RESTQ13127 1097 aa18.13■□□□□ 0.49
ERBB2-222ENST00000584908 EMC2Q15006 297 aa18.13■□□□□ 0.49
ERBB2-222ENST00000584908 FERMT3Q86UX7 667 aa18.13■□□□□ 0.49
ERBB2-222ENST00000584908 SP7Q8TDD2 431 aaPredicted RBP18.13■□□□□ 0.49
ERBB2-222ENST00000584908 PIGOQ8TEQ8 1089 aa18.13■□□□□ 0.49
ERBB2-222ENST00000584908 NACC1Q96RE7 527 aa18.13■□□□□ 0.49
ERBB2-222ENST00000584908 PPP1R16BQ96T49 567 aa18.13■□□□□ 0.49
ERBB2-222ENST00000584908 ST3GAL5Q9UNP4 418 aa18.13■□□□□ 0.49
ERBB2-222ENST00000584908 MTMR6Q9Y217 621 aa18.13■□□□□ 0.49
ERBB2-222ENST00000584908 INSL6Q9Y581 213 aa18.13■□□□□ 0.49
ERBB2-222ENST00000584908 STX6O43752 255 aa18.12■□□□□ 0.49
ERBB2-222ENST00000584908 PDIA4P13667 645 aaKnown RBP18.12■□□□□ 0.49
ERBB2-222ENST00000584908 PPP2R2DQ66LE6 453 aa18.12■□□□□ 0.49
ERBB2-222ENST00000584908 TCP11Q8WWU5 503 aa18.12■□□□□ 0.49
ERBB2-222ENST00000584908 ZBED2Q9BTP6 218 aa18.12■□□□□ 0.49
ERBB2-222ENST00000584908 RC3H2Q9HBD1 1191 aaKnown RBP18.12■□□□□ 0.49
ERBB2-222ENST00000584908 FOXD4L1Q9NU39 408 aa18.12■□□□□ 0.49
ERBB2-222ENST00000584908 COL4A3BPQ9Y5P4 624 aa18.12■□□□□ 0.49
ERBB2-222ENST00000584908 ASAP2O43150 1006 aa18.11■□□□□ 0.49
ERBB2-222ENST00000584908 MGEA5O60502 916 aa18.11■□□□□ 0.49
ERBB2-222ENST00000584908 CCT6AP40227 531 aaKnown RBP18.11■□□□□ 0.49
ERBB2-222ENST00000584908 TAP1Q03518 808 aa18.11■□□□□ 0.49
ERBB2-222ENST00000584908 NFX1Q12986 1120 aaKnown RBP18.11■□□□□ 0.49
ERBB2-222ENST00000584908 DSC3Q14574 896 aa18.11■□□□□ 0.49
ERBB2-222ENST00000584908 GRIN2CQ14957 1233 aa18.11■□□□□ 0.49
ERBB2-222ENST00000584908 ECM1Q16610 540 aa18.11■□□□□ 0.49
ERBB2-222ENST00000584908 POTEGQ6S5H5 508 aa18.11■□□□□ 0.49
ERBB2-222ENST00000584908 RHPN2Q8IUC4 686 aa18.11■□□□□ 0.49
ERBB2-222ENST00000584908 PRPF31Q8WWY3 499 aaKnown RBP18.11■□□□□ 0.49
ERBB2-222ENST00000584908 NLRP7Q8WX94 980 aa18.11■□□□□ 0.49
ERBB2-222ENST00000584908 PSPC1Q8WXF1 523 aaKnown RBP18.11■□□□□ 0.49
ERBB2-222ENST00000584908 FAM161BQ96MY7 647 aa18.11■□□□□ 0.49
ERBB2-222ENST00000584908 CDX2Q99626 313 aaPredicted RBP18.11■□□□□ 0.49
ERBB2-222ENST00000584908 MTRQ99707 1265 aa18.11■□□□□ 0.49
ERBB2-222ENST00000584908 MMTAG2Q9BU76 263 aaKnown RBP18.11■□□□□ 0.49
ERBB2-222ENST00000584908 GCOM2Q9BZD3 368 aaPredicted RBP18.11■□□□□ 0.49
ERBB2-222ENST00000584908 ATP6V0A4Q9HBG4 840 aa18.11■□□□□ 0.49
ERBB2-222ENST00000584908 IFT122Q9HBG6 1241 aa18.11■□□□□ 0.49
ERBB2-222ENST00000584908 RGS18Q9NS28 235 aa18.11■□□□□ 0.49
ERBB2-222ENST00000584908 STXBP5LQ9Y2K9 1186 aa18.11■□□□□ 0.49
ERBB2-222ENST00000584908 NLRC5Q86WI3 1866 aa18.11■□□□□ 0.49
ERBB2-222ENST00000584908 A0A087WZ62 844 aa18.1■□□□□ 0.49
ERBB2-222ENST00000584908 LCHNA4D1U4 455 aa18.1■□□□□ 0.49
ERBB2-222ENST00000584908 ARHGEF15O94989 841 aa18.1■□□□□ 0.49
ERBB2-222ENST00000584908 HYIQ5T013 277 aa18.1■□□□□ 0.49
ERBB2-222ENST00000584908 KCTD17Q8N5Z5 321 aa18.1■□□□□ 0.49
ERBB2-222ENST00000584908 SNX29Q8TEQ0 813 aa18.1■□□□□ 0.49
ERBB2-222ENST00000584908 TMEM143Q96AN5 459 aa18.1■□□□□ 0.49
ERBB2-222ENST00000584908 FDXACB1Q9BRP7 624 aaPredicted RBP18.1■□□□□ 0.49
ERBB2-222ENST00000584908 INO80BQ9C086 356 aaPredicted RBP18.1■□□□□ 0.49
ERBB2-222ENST00000584908 ZSCAN16Q9H4T2 348 aaPredicted RBP18.1■□□□□ 0.49
ERBB2-222ENST00000584908 C1orf112Q9NSG2 853 aa18.1■□□□□ 0.49
ERBB2-222ENST00000584908 RALGAPA2Q2PPJ7 1873 aa18.1■□□□□ 0.49
ERBB2-222ENST00000584908 PP2D1A8MPX8 630 aa18.09■□□□□ 0.49
ERBB2-222ENST00000584908 C9IYK1 514 aa18.09■□□□□ 0.49
ERBB2-222ENST00000584908 ARL2P36404 184 aa18.09■□□□□ 0.49
ERBB2-222ENST00000584908 SARSP49591 514 aaKnown RBP18.09■□□□□ 0.49
ERBB2-222ENST00000584908 FAM189BP81408 668 aa18.09■□□□□ 0.49
ERBB2-222ENST00000584908 POU5F1BQ06416 359 aa18.09■□□□□ 0.49
ERBB2-222ENST00000584908 LAMTOR4Q0VGL1 99 aa18.09■□□□□ 0.49
ERBB2-222ENST00000584908 MXD4Q14582 209 aaPredicted RBP18.09■□□□□ 0.49
ERBB2-222ENST00000584908 SF3A1Q15459 793 aaKnown RBP18.09■□□□□ 0.49
ERBB2-222ENST00000584908 KRT79Q5XKE5 535 aa18.09■□□□□ 0.49
ERBB2-222ENST00000584908 NPAS4Q8IUM7 802 aa18.09■□□□□ 0.49
ERBB2-222ENST00000584908 KSR1Q8IVT5 923 aa18.09■□□□□ 0.49
ERBB2-222ENST00000584908 ZNF689Q96CS4 500 aaPredicted RBP18.09■□□□□ 0.49
ERBB2-222ENST00000584908 ZNF668Q96K58 619 aaPredicted RBP18.09■□□□□ 0.49
ERBB2-222ENST00000584908 AK8Q96MA6 479 aa18.09■□□□□ 0.49
ERBB2-222ENST00000584908 CCDC43Q96MW1 224 aaKnown RBP18.09■□□□□ 0.49
ERBB2-222ENST00000584908 SCLT1Q96NL6 688 aa18.09■□□□□ 0.49
ERBB2-222ENST00000584908 MORC2Q9Y6X9 1032 aaPredicted RBP18.09■□□□□ 0.49
ERBB2-222ENST00000584908 FNDC1Q4ZHG4 1894 aaPredicted RBP18.09■□□□□ 0.49
ERBB2-222ENST00000584908 A0A087WWV3 80 aa18.08■□□□□ 0.49
ERBB2-222ENST00000584908 LINC01553A4QN01 128 aa18.08■□□□□ 0.49
ERBB2-222ENST00000584908 VWA3AA6NCI4 1184 aa18.08■□□□□ 0.49
ERBB2-222ENST00000584908 SLC26A4O43511 780 aa18.08■□□□□ 0.49
ERBB2-222ENST00000584908 UPP2O95045 317 aa18.08■□□□□ 0.49
ERBB2-222ENST00000584908 PTPAQ15257 358 aa18.08■□□□□ 0.49
ERBB2-222ENST00000584908 FAM117BQ6P1L5 589 aa18.08■□□□□ 0.49
ERBB2-222ENST00000584908 SLC24A5Q71RS6 500 aa18.08■□□□□ 0.49
ERBB2-222ENST00000584908 SRGAP1Q7Z6B7 1085 aa18.08■□□□□ 0.49
ERBB2-222ENST00000584908 IFNLR1Q8IU57 520 aaPredicted RBP18.08■□□□□ 0.49
ERBB2-222ENST00000584908 MCPH1Q8NEM0 835 aa18.08■□□□□ 0.49
ERBB2-222ENST00000584908 ADAM2Q99965 735 aa18.08■□□□□ 0.49
ERBB2-222ENST00000584908 BMP2KQ9NSY1 1161 aaPredicted RBP18.08■□□□□ 0.49
ERBB2-222ENST00000584908 DDX19AQ9NUU7 478 aaKnown RBP18.08■□□□□ 0.49
ERBB2-222ENST00000584908 RNF216Q9NWF9 866 aaPredicted RBP18.08■□□□□ 0.49
ERBB2-222ENST00000584908 KIAA1024Q9UPX6 916 aa18.08■□□□□ 0.49
ERBB2-222ENST00000584908 DENND3A2RUS2 1198 aa18.07■□□□□ 0.48
ERBB2-222ENST00000584908 DGKIO75912 1065 aa18.07■□□□□ 0.48
ERBB2-222ENST00000584908 STAG3L1P0CL83 205 aa18.07■□□□□ 0.48
ERBB2-222ENST00000584908 SFPQP23246 707 aaKnown RBP eCLIP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms