RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 TMEM177Q53S58 311 aa4.45□□□□□ -1.7
VAPA-208ENST00000584796 CC2D1AQ6P1N0 951 aaPredicted RBP4.45□□□□□ -1.7
VAPA-208ENST00000584796 KLHDC10Q6PID8 442 aa4.45□□□□□ -1.7
VAPA-208ENST00000584796 BRAPQ7Z569 592 aa4.45□□□□□ -1.7
VAPA-208ENST00000584796 LARP4BQ92615 738 aaKnown RBP4.45□□□□□ -1.7
VAPA-208ENST00000584796 TMEM176AQ96HP8 235 aa4.45□□□□□ -1.7
VAPA-208ENST00000584796 BOCQ9BWV1 1114 aa4.45□□□□□ -1.7
VAPA-208ENST00000584796 MRPL4Q9BYD3 311 aaKnown RBP4.45□□□□□ -1.7
VAPA-208ENST00000584796 KRTAP9-8Q9BYQ0 159 aa4.45□□□□□ -1.7
VAPA-208ENST00000584796 CCDC163A0A0D9SF12 145 aa4.44□□□□□ -1.7
VAPA-208ENST00000584796 PEX11BO96011 259 aa4.44□□□□□ -1.7
VAPA-208ENST00000584796 FNTBP49356 437 aa4.44□□□□□ -1.7
VAPA-208ENST00000584796 ADAM8P78325 824 aa4.44□□□□□ -1.7
VAPA-208ENST00000584796 RRP1BQ14684 758 aaKnown RBP4.44□□□□□ -1.7
VAPA-208ENST00000584796 PCSK4Q6UW60 755 aa4.44□□□□□ -1.7
VAPA-208ENST00000584796 FGD2Q7Z6J4 655 aa4.44□□□□□ -1.7
VAPA-208ENST00000584796 ANKRD35Q8N283 1001 aa4.44□□□□□ -1.7
VAPA-208ENST00000584796 C2orf69Q8N8R5 385 aa4.44□□□□□ -1.7
VAPA-208ENST00000584796 IGSF22Q8N9C0 903 aa4.44□□□□□ -1.7
VAPA-208ENST00000584796 ZSWIM2Q8NEG5 633 aa4.44□□□□□ -1.7
VAPA-208ENST00000584796 SLC7A6OSQ96CW6 309 aaPredicted RBP4.44□□□□□ -1.7
VAPA-208ENST00000584796 SLC6A15Q9H2J7 730 aa4.44□□□□□ -1.7
VAPA-208ENST00000584796 TRIM39Q9HCM9 518 aa4.44□□□□□ -1.7
VAPA-208ENST00000584796 PARPBPQ9NWS1 579 aa4.44□□□□□ -1.7
VAPA-208ENST00000584796 CHD1O14646 1710 aa4.43□□□□□ -1.7
VAPA-208ENST00000584796 ARHGEF11O15085 1522 aa4.43□□□□□ -1.7
VAPA-208ENST00000584796 A0A087X1B8 175 aa4.43□□□□□ -1.7
VAPA-208ENST00000584796 A0A1W2PRX2 142 aa4.43□□□□□ -1.7
VAPA-208ENST00000584796 H2AFYO75367 372 aaKnown RBP4.43□□□□□ -1.7
VAPA-208ENST00000584796 PRLP01236 227 aa4.43□□□□□ -1.7
VAPA-208ENST00000584796 STAT3P40763 770 aa4.43□□□□□ -1.7
VAPA-208ENST00000584796 MECP2P51608 486 aaKnown RBP4.43□□□□□ -1.7
VAPA-208ENST00000584796 ATP2C1P98194 919 aaPredicted RBP4.43□□□□□ -1.7
VAPA-208ENST00000584796 ZNF627Q7L945 461 aa4.43□□□□□ -1.7
VAPA-208ENST00000584796 OR5AN1Q8NGI8 311 aa4.43□□□□□ -1.7
VAPA-208ENST00000584796 ERCC4Q92889 916 aaPredicted RBP4.43□□□□□ -1.7
VAPA-208ENST00000584796 GFM2Q969S9 779 aaKnown RBP4.43□□□□□ -1.7
VAPA-208ENST00000584796 GPHA2Q96T91 129 aa4.43□□□□□ -1.7
VAPA-208ENST00000584796 DNAJC7Q99615 494 aa4.43□□□□□ -1.7
VAPA-208ENST00000584796 SAE1Q9UBE0 346 aaPredicted RBP4.43□□□□□ -1.7
VAPA-208ENST00000584796 MRC2Q9UBG0 1479 aa4.43□□□□□ -1.7
VAPA-208ENST00000584796 C2orf78A6NCI8 922 aa4.42□□□□□ -1.7
VAPA-208ENST00000584796 GTF2F1P35269 517 aaKnown RBP eCLIP4.42□□□□□ -1.7
VAPA-208ENST00000584796 RGS3P49796 1198 aa4.42□□□□□ -1.7
VAPA-208ENST00000584796 SCNN1GP51170 649 aa4.42□□□□□ -1.7
VAPA-208ENST00000584796 SLC25A3Q00325 362 aa4.42□□□□□ -1.7
VAPA-208ENST00000584796 CRHR2Q13324 411 aa4.42□□□□□ -1.7
VAPA-208ENST00000584796 ARHGAP44Q17R89 818 aa4.42□□□□□ -1.7
VAPA-208ENST00000584796 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
VAPA-208ENST00000584796 Q6ZPA2 131 aa4.42□□□□□ -1.7
VAPA-208ENST00000584796 THAP3Q8WTV1 239 aaPredicted RBP4.42□□□□□ -1.7
VAPA-208ENST00000584796 NKD2Q969F2 451 aaPredicted RBP4.42□□□□□ -1.7
VAPA-208ENST00000584796 MKL1Q969V6 931 aa4.42□□□□□ -1.7
VAPA-208ENST00000584796 E2F7Q96AV8 911 aa4.42□□□□□ -1.7
VAPA-208ENST00000584796 MIEF2Q96C03 454 aa4.42□□□□□ -1.7
VAPA-208ENST00000584796 C8orf37Q96NL8 207 aa4.42□□□□□ -1.7
VAPA-208ENST00000584796 NCOA5Q9HCD5 579 aaKnown RBP4.42□□□□□ -1.7
VAPA-208ENST00000584796 DENND2AQ9ULE3 1009 aa4.42□□□□□ -1.7
VAPA-208ENST00000584796 BAZ1BQ9UIG0 1483 aaKnown RBP4.42□□□□□ -1.7
VAPA-208ENST00000584796 E9PSI1 815 aa4.41□□□□□ -1.7
VAPA-208ENST00000584796 DVL2O14641 736 aa4.41□□□□□ -1.7
VAPA-208ENST00000584796 ANTXR2P58335 489 aa4.41□□□□□ -1.7
VAPA-208ENST00000584796 SLC6A3Q01959 620 aa4.41□□□□□ -1.7
VAPA-208ENST00000584796 ROM1Q03395 351 aa4.41□□□□□ -1.7
VAPA-208ENST00000584796 ACAP1Q15027 740 aa4.41□□□□□ -1.7
VAPA-208ENST00000584796 DGKDQ16760 1214 aa4.41□□□□□ -1.7
VAPA-208ENST00000584796 GAGE13Q4V321 117 aa4.41□□□□□ -1.7
VAPA-208ENST00000584796 C2orf27AQ580R0 203 aa4.41□□□□□ -1.7
VAPA-208ENST00000584796 Q6ZRM9 215 aa4.41□□□□□ -1.7
VAPA-208ENST00000584796 MRGPRGQ86SM5 289 aa4.41□□□□□ -1.7
VAPA-208ENST00000584796 ZNF575Q86XF7 245 aa4.41□□□□□ -1.7
VAPA-208ENST00000584796 ULK2Q8IYT8 1036 aa4.41□□□□□ -1.7
VAPA-208ENST00000584796 ANKRD53Q8N9V6 530 aa4.41□□□□□ -1.7
VAPA-208ENST00000584796 CLIP3Q96DZ5 547 aa4.41□□□□□ -1.7
VAPA-208ENST00000584796 MAML3Q96JK9 1138 aa4.41□□□□□ -1.7
VAPA-208ENST00000584796 PRRX2Q99811 253 aa4.41□□□□□ -1.7
VAPA-208ENST00000584796 HAPLN2Q9GZV7 340 aa4.41□□□□□ -1.7
VAPA-208ENST00000584796 SLC2A4RGQ9NR83 387 aa4.41□□□□□ -1.7
VAPA-208ENST00000584796 RBM8AQ9Y5S9 174 aaKnown RBP4.41□□□□□ -1.7
VAPA-208ENST00000584796 MROH2BQ7Z745 1585 aa4.4□□□□□ -1.7
VAPA-208ENST00000584796 PEG3Q9GZU2 1588 aa4.4□□□□□ -1.7
VAPA-208ENST00000584796 KRT4P19013 534 aa4.4□□□□□ -1.71
VAPA-208ENST00000584796 BPIFB4P59827 614 aa4.4□□□□□ -1.71
VAPA-208ENST00000584796 KRTAP1-1Q07627 177 aa4.4□□□□□ -1.71
VAPA-208ENST00000584796 TCIRG1Q13488 830 aa4.4□□□□□ -1.71
VAPA-208ENST00000584796 TOB2Q14106 344 aaPredicted RBP4.4□□□□□ -1.71
VAPA-208ENST00000584796 FAM111BQ6SJ93 734 aa4.4□□□□□ -1.71
VAPA-208ENST00000584796 HTR3DQ70Z44 454 aa4.4□□□□□ -1.71
VAPA-208ENST00000584796 GAREM2Q75VX8 874 aa4.4□□□□□ -1.71
VAPA-208ENST00000584796 GCDHQ92947 438 aaPredicted RBP4.4□□□□□ -1.71
VAPA-208ENST00000584796 RPL10LQ96L21 214 aaKnown RBP4.4□□□□□ -1.71
VAPA-208ENST00000584796 SRPK1Q96SB4 655 aaKnown RBP4.4□□□□□ -1.71
VAPA-208ENST00000584796 AGAP2Q99490 1192 aa4.4□□□□□ -1.71
VAPA-208ENST00000584796 GPRC5BQ9NZH0 403 aa4.4□□□□□ -1.71
VAPA-208ENST00000584796 KCMF1Q9P0J7 381 aa4.4□□□□□ -1.71
VAPA-208ENST00000584796 MAGEL2Q9UJ55 1249 aa4.4□□□□□ -1.71
VAPA-208ENST00000584796 DMRT1Q9Y5R6 373 aa4.4□□□□□ -1.71
VAPA-208ENST00000584796 PTCH2Q9Y6C5 1203 aa4.4□□□□□ -1.71
VAPA-208ENST00000584796 ARAP1Q96P48 1450 aa4.4□□□□□ -1.71
VAPA-208ENST00000584796 M0R2C6 588 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms