RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 TRIOO75962 3097 aa27.83■■■□□ 2.05
TSEN54-209ENST00000583454 SMIM35A0A1B0GVV1 85 aa27.83■■■□□ 2.05
TSEN54-209ENST00000583454 DGKIO75912 1065 aa27.83■■■□□ 2.05
TSEN54-209ENST00000583454 TRMT1LQ7Z2T5 733 aaKnown RBP27.83■■■□□ 2.05
TSEN54-209ENST00000583454 NEK9Q8TD19 979 aa27.83■■■□□ 2.05
TSEN54-209ENST00000583454 RGL1Q9NZL6 768 aa27.83■■■□□ 2.05
TSEN54-209ENST00000583454 KDM3AQ9Y4C1 1321 aa27.83■■■□□ 2.05
TSEN54-209ENST00000583454 LAD1O00515 517 aa27.82■■■□□ 2.04
TSEN54-209ENST00000583454 DKC1O60832 514 aaKnown RBP eCLIP27.82■■■□□ 2.04
TSEN54-209ENST00000583454 SLITRK3O94933 977 aa27.82■■■□□ 2.04
TSEN54-209ENST00000583454 CTNNB1P35222 781 aa27.82■■■□□ 2.04
TSEN54-209ENST00000583454 BMPR1AP36894 532 aa27.82■■■□□ 2.04
TSEN54-209ENST00000583454 TARBP2Q15633 366 aaKnown RBP27.82■■■□□ 2.04
TSEN54-209ENST00000583454 TCEAL5Q5H9L2 206 aa27.82■■■□□ 2.04
TSEN54-209ENST00000583454 FERMT3Q86UX7 667 aa27.82■■■□□ 2.04
TSEN54-209ENST00000583454 DYDC2Q96IM9 177 aa27.82■■■□□ 2.04
TSEN54-209ENST00000583454 EIF2AK1Q9BQI3 630 aaKnown RBP27.82■■■□□ 2.04
TSEN54-209ENST00000583454 EPHX3Q9H6B9 360 aa27.82■■■□□ 2.04
TSEN54-209ENST00000583454 WRAP73Q9P2S5 460 aaPredicted RBP27.82■■■□□ 2.04
TSEN54-209ENST00000583454 PADI3Q9ULW8 664 aa27.82■■■□□ 2.04
TSEN54-209ENST00000583454 FNDC1Q4ZHG4 1894 aaPredicted RBP27.82■■■□□ 2.04
TSEN54-209ENST00000583454 STX6O43752 255 aa27.81■■■□□ 2.04
TSEN54-209ENST00000583454 C22orf31O95567 290 aa27.81■■■□□ 2.04
TSEN54-209ENST00000583454 RB1P06400 928 aa27.81■■■□□ 2.04
TSEN54-209ENST00000583454 HSP90AA1P07900 732 aaKnown RBP27.81■■■□□ 2.04
TSEN54-209ENST00000583454 FXR2P51116 673 aaKnown RBP eCLIP27.81■■■□□ 2.04
TSEN54-209ENST00000583454 C4orf19Q8IY42 314 aa27.81■■■□□ 2.04
TSEN54-209ENST00000583454 LXNQ9BS40 222 aa27.81■■■□□ 2.04
TSEN54-209ENST00000583454 CELF4Q9BZC1 486 aaKnown RBP27.81■■■□□ 2.04
TSEN54-209ENST00000583454 TMX1Q9H3N1 280 aa27.81■■■□□ 2.04
TSEN54-209ENST00000583454 POTEMA6NI47 508 aa27.8■■■□□ 2.04
TSEN54-209ENST00000583454 GRM6O15303 877 aa27.8■■■□□ 2.04
TSEN54-209ENST00000583454 MAGEB2O15479 319 aa27.8■■■□□ 2.04
TSEN54-209ENST00000583454 TECP42680 631 aa27.8■■■□□ 2.04
TSEN54-209ENST00000583454 RESTQ13127 1097 aa27.8■■■□□ 2.04
TSEN54-209ENST00000583454 ANO5Q75V66 913 aa27.8■■■□□ 2.04
TSEN54-209ENST00000583454 CEP89Q96ST8 783 aa27.8■■■□□ 2.04
TSEN54-209ENST00000583454 NSUN3Q9H649 340 aaKnown RBP27.8■■■□□ 2.04
TSEN54-209ENST00000583454 ZSWIM4Q9H7M6 989 aa27.8■■■□□ 2.04
TSEN54-209ENST00000583454 PLXNA4Q9HCM2 1894 aa27.79■■■□□ 2.04
TSEN54-209ENST00000583454 DDX11L8A8MPP1 907 aa27.79■■■□□ 2.04
TSEN54-209ENST00000583454 LYPLA2O95372 231 aa27.79■■■□□ 2.04
TSEN54-209ENST00000583454 IL9P15248 144 aa27.79■■■□□ 2.04
TSEN54-209ENST00000583454 PRPHP41219 470 aa27.79■■■□□ 2.04
TSEN54-209ENST00000583454 CYP4A11Q02928 519 aa27.79■■■□□ 2.04
TSEN54-209ENST00000583454 PDIA5Q14554 519 aa27.79■■■□□ 2.04
TSEN54-209ENST00000583454 KIAA0319LQ8IZA0 1049 aa27.79■■■□□ 2.04
TSEN54-209ENST00000583454 NME8Q8N427 588 aa27.79■■■□□ 2.04
TSEN54-209ENST00000583454 C1QTNF1Q9BXJ1 281 aa27.79■■■□□ 2.04
TSEN54-209ENST00000583454 FTHL17Q9BXU8 183 aa27.79■■■□□ 2.04
TSEN54-209ENST00000583454 PDIA4P13667 645 aaKnown RBP27.78■■■□□ 2.04
TSEN54-209ENST00000583454 ATP2C1P98194 919 aaPredicted RBP27.78■■■□□ 2.04
TSEN54-209ENST00000583454 BTG3Q14201 252 aaPredicted RBP27.78■■■□□ 2.04
TSEN54-209ENST00000583454 CTTNQ14247 550 aaKnown RBP27.78■■■□□ 2.04
TSEN54-209ENST00000583454 TMEM266Q2M3C6 531 aa27.78■■■□□ 2.04
TSEN54-209ENST00000583454 TPH2Q8IWU9 490 aa27.78■■■□□ 2.04
TSEN54-209ENST00000583454 FAM178BQ8IXR5 827 aa27.78■■■□□ 2.04
TSEN54-209ENST00000583454 LINC01465Q8N7H1 131 aa27.78■■■□□ 2.04
TSEN54-209ENST00000583454 PABPC5Q96DU9 382 aaKnown RBP27.78■■■□□ 2.04
TSEN54-209ENST00000583454 C11orf84Q9BUA3 381 aaPredicted RBP27.78■■■□□ 2.04
TSEN54-209ENST00000583454 CDHR5Q9HBB8 845 aa27.78■■■□□ 2.04
TSEN54-209ENST00000583454 SEPT9Q9UHD8 586 aaPredicted RBP27.78■■■□□ 2.04
TSEN54-209ENST00000583454 RWDD3Q9Y3V2 267 aa27.78■■■□□ 2.04
TSEN54-209ENST00000583454 TMEM150BA6NC51 233 aa27.77■■■□□ 2.04
TSEN54-209ENST00000583454 GRXCR2A6NFK2 248 aa27.77■■■□□ 2.04
TSEN54-209ENST00000583454 H3BQ06 376 aaPredicted RBP27.77■■■□□ 2.04
TSEN54-209ENST00000583454 SPATA31C1P0DKV0 1188 aa27.77■■■□□ 2.04
TSEN54-209ENST00000583454 CAMK1Q14012 370 aa27.77■■■□□ 2.04
TSEN54-209ENST00000583454 PTCRAQ6ISU1 281 aaPredicted RBP27.77■■■□□ 2.04
TSEN54-209ENST00000583454 NPAS4Q8IUM7 802 aa27.77■■■□□ 2.04
TSEN54-209ENST00000583454 IGSF22Q8N9C0 903 aa27.77■■■□□ 2.04
TSEN54-209ENST00000583454 LMAN2LQ9H0V9 348 aa27.77■■■□□ 2.04
TSEN54-209ENST00000583454 MRPL42Q9Y6G3 142 aaKnown RBP27.77■■■□□ 2.04
TSEN54-209ENST00000583454 M0QZ92 97 aa27.76■■■□□ 2.03
TSEN54-209ENST00000583454 LTBRP36941 435 aa27.76■■■□□ 2.03
TSEN54-209ENST00000583454 PAK2Q13177 524 aa27.76■■■□□ 2.03
TSEN54-209ENST00000583454 IL17AQ16552 155 aa27.76■■■□□ 2.03
TSEN54-209ENST00000583454 CMTR2Q8IYT2 770 aaKnown RBP27.76■■■□□ 2.03
TSEN54-209ENST00000583454 TMEM40Q8WWA1 233 aa27.76■■■□□ 2.03
TSEN54-209ENST00000583454 POLR3CQ9BUI4 534 aaPredicted RBP27.76■■■□□ 2.03
TSEN54-209ENST00000583454 ERVK-5Q9HDB9 667 aa27.76■■■□□ 2.03
TSEN54-209ENST00000583454 C11orf16Q9NQ32 467 aa27.76■■■□□ 2.03
TSEN54-209ENST00000583454 MGEA5O60502 916 aa27.75■■■□□ 2.03
TSEN54-209ENST00000583454 YWHABP31946 246 aaKnown RBP27.75■■■□□ 2.03
TSEN54-209ENST00000583454 TBC1D8BQ0IIM8 1120 aa27.75■■■□□ 2.03
TSEN54-209ENST00000583454 CTC1Q2NKJ3 1217 aa27.75■■■□□ 2.03
TSEN54-209ENST00000583454 MTERF2Q49AM1 385 aa27.75■■■□□ 2.03
TSEN54-209ENST00000583454 DTHD1Q6ZMT9 781 aa27.75■■■□□ 2.03
TSEN54-209ENST00000583454 CATSPER3Q86XQ3 398 aa27.75■■■□□ 2.03
TSEN54-209ENST00000583454 ZSCAN16Q9H4T2 348 aaPredicted RBP27.75■■■□□ 2.03
TSEN54-209ENST00000583454 TUFT1Q9NNX1 390 aa27.75■■■□□ 2.03
TSEN54-209ENST00000583454 CYP26B1Q9NR63 512 aa27.75■■■□□ 2.03
TSEN54-209ENST00000583454 NOC2LQ9Y3T9 749 aaKnown RBP27.75■■■□□ 2.03
TSEN54-209ENST00000583454 PPME1Q9Y570 386 aa27.75■■■□□ 2.03
TSEN54-209ENST00000583454 IGKV6-21A0A0C4DH24 114 aa27.74■■■□□ 2.03
TSEN54-209ENST00000583454 GATMP50440 423 aa27.74■■■□□ 2.03
TSEN54-209ENST00000583454 ARL6IP4Q66PJ3 421 aaKnown RBP27.74■■■□□ 2.03
TSEN54-209ENST00000583454 EFCAB12Q6NXP0 572 aa27.74■■■□□ 2.03
TSEN54-209ENST00000583454 OTUD6AQ7L8S5 288 aa27.74■■■□□ 2.03
TSEN54-209ENST00000583454 METTL13Q8N6R0 699 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms