RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 METTL13Q8N6R0 699 aa10.96□□□□□ -0.65
CDK5RAP3-227ENST00000583352 FAM167AQ96KS9 214 aa10.96□□□□□ -0.65
CDK5RAP3-227ENST00000583352 MAP7D2Q96T17 732 aa10.96□□□□□ -0.65
CDK5RAP3-227ENST00000583352 PHF7Q9BWX1 381 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-227ENST00000583352 FAM217BQ9NTX9 383 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-227ENST00000583352 TYW1Q9NV66 732 aaKnown RBP10.96□□□□□ -0.65
CDK5RAP3-227ENST00000583352 PUF60Q9UHX1 559 aaKnown RBP10.96□□□□□ -0.65
CDK5RAP3-227ENST00000583352 SMC3Q9UQE7 1217 aa10.96□□□□□ -0.65
CDK5RAP3-227ENST00000583352 PCDHA10Q9Y5I2 948 aa10.96□□□□□ -0.65
CDK5RAP3-227ENST00000583352 MAFBQ9Y5Q3 323 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-227ENST00000583352 EVPLQ92817 2033 aa10.96□□□□□ -0.66
CDK5RAP3-227ENST00000583352 TMEM221A6NGB7 291 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 M0R296 226 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 FSCN2O14926 492 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 MAGEB2O15479 319 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 HOXA2O43364 376 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 VTNP04004 478 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 FGFR1P11362 822 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 ATF7P17544 494 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 TMOD1P28289 359 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 GNA11P29992 359 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 METAP2P50579 478 aaKnown RBP eCLIP10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 ERVFC1P60507 584 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 FAM189BP81408 668 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 ZXDAP98168 799 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 DSC3Q14574 896 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 CBX2Q14781 532 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 PKN1Q16512 942 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 TRIM67Q6ZTA4 783 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 TRMT1LQ7Z2T5 733 aaKnown RBP10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 REXO1Q8N1G1 1221 aaKnown RBP10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 CRYGNQ8WXF5 182 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 MRPS27Q92552 414 aaKnown RBP10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 PBXIP1Q96AQ6 731 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 ZNF274Q96GC6 653 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 RPGRIP1Q96KN7 1286 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 GBP4Q96PP9 640 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 ZMYND12Q9H0C1 365 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 TMEM117Q9H0C3 514 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 CWH43Q9H720 699 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 HCSTQ9UBK5 93 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 GABBR1Q9UBS5 961 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 LZTS1Q9Y250 596 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 SAMM50Q9Y512 469 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 MUC6Q6W4X9 2439 aa10.95□□□□□ -0.66
CDK5RAP3-227ENST00000583352 MYH9P35579 1960 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 GPR32O75388 356 aa10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 ZSCAN20P17040 1043 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 SYT1P21579 422 aa10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 PDIA3P30101 505 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 ADD1P35611 737 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 CLCN3P51790 818 aa10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 RBM10P98175 930 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 PLCB3Q01970 1234 aa10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 PRR16Q569H4 304 aa10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 PLPP4Q5VZY2 271 aa10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 EFCAB12Q6NXP0 572 aa10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 SUGP1Q8IWZ8 645 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 ABI1Q8IZP0 508 aa10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 ZNF710Q8N1W2 664 aa10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 LRRC43Q8N309 656 aa10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 VN1R2Q8NFZ6 395 aa10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 SUSD6Q92537 303 aa10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 BRF1Q92994 677 aa10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 GTF3C6Q969F1 213 aa10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 ZNF558Q96NG5 402 aa10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 ENTPD7Q9NQZ7 604 aa10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 NRBP2Q9NSY0 501 aa10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 AKT3Q9Y243 479 aa10.94□□□□□ -0.66
CDK5RAP3-227ENST00000583352 WDR64B1ANS9 1081 aa10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 PRPF3O43395 683 aaKnown RBP10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 GJB2P29033 226 aa10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 CIITAP33076 1130 aa10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 PPM1AP35813 382 aa10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 TECP42680 631 aa10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 NLRP11P59045 1033 aaKnown RBP10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 AKAP17AQ02040 695 aaKnown RBP10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 KRT17Q04695 432 aa10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 SIGLEC14Q08ET2 396 aa10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 APOBRQ0VD83 1088 aa10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 ANKRD54Q6NXT1 300 aa10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 KCNT2Q6UVM3 1135 aa10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 TMEM184AQ6ZMB5 413 aa10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 LINC01465Q8N7H1 131 aa10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 CCDC148Q8NFR7 591 aa10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 BICD2Q8TD16 824 aa10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 RASGRP4Q8TDF6 673 aa10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 SCLT1Q96NL6 688 aa10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 CASD1Q96PB1 797 aa10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 PRRX2Q99811 253 aa10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 TCF25Q9BQ70 676 aa10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 LLPHQ9BRT6 129 aaKnown RBP10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 NGRNQ9NPE2 291 aaKnown RBP10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 TECTAO75443 2155 aa10.93□□□□□ -0.66
CDK5RAP3-227ENST00000583352 XIRP2A4UGR9 3374 aa10.92□□□□□ -0.66
CDK5RAP3-227ENST00000583352 DDX11L8A8MPP1 907 aa10.92□□□□□ -0.66
CDK5RAP3-227ENST00000583352 ADAMTS3O15072 1205 aa10.92□□□□□ -0.66
CDK5RAP3-227ENST00000583352 TRAK2O60296 914 aa10.92□□□□□ -0.66
CDK5RAP3-227ENST00000583352 CTDNEP1O95476 244 aa10.92□□□□□ -0.66
CDK5RAP3-227ENST00000583352 OATP04181 439 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms