RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ENPP3O14638 875 aa14.06□□□□□ -0.16
SMARCE1-218ENST00000582955 SPATA31C1P0DKV0 1188 aa14.06□□□□□ -0.16
SMARCE1-218ENST00000582955 SYT1P21579 422 aa14.06□□□□□ -0.16
SMARCE1-218ENST00000582955 CCT6AP40227 531 aaKnown RBP14.06□□□□□ -0.16
SMARCE1-218ENST00000582955 CDC42EP1Q00587 391 aa14.06□□□□□ -0.16
SMARCE1-218ENST00000582955 EMC2Q15006 297 aa14.06□□□□□ -0.16
SMARCE1-218ENST00000582955 POTEGQ6S5H5 508 aa14.06□□□□□ -0.16
SMARCE1-218ENST00000582955 DTHD1Q6ZMT9 781 aa14.06□□□□□ -0.16
SMARCE1-218ENST00000582955 FAM228AQ86W67 206 aa14.06□□□□□ -0.16
SMARCE1-218ENST00000582955 LINC01599Q8WXQ3 324 aa14.06□□□□□ -0.16
SMARCE1-218ENST00000582955 MYLIPQ8WY64 445 aa14.06□□□□□ -0.16
SMARCE1-218ENST00000582955 TOP1MTQ969P6 601 aa14.06□□□□□ -0.16
SMARCE1-218ENST00000582955 TMEM143Q96AN5 459 aa14.06□□□□□ -0.16
SMARCE1-218ENST00000582955 NLRP4Q96MN2 994 aa14.06□□□□□ -0.16
SMARCE1-218ENST00000582955 YME1L1Q96TA2 773 aa14.06□□□□□ -0.16
SMARCE1-218ENST00000582955 MTRQ99707 1265 aa14.06□□□□□ -0.16
SMARCE1-218ENST00000582955 POLR3CQ9BUI4 534 aaPredicted RBP14.06□□□□□ -0.16
SMARCE1-218ENST00000582955 TMX1Q9H3N1 280 aa14.06□□□□□ -0.16
SMARCE1-218ENST00000582955 DHX33Q9H6R0 707 aaKnown RBP14.06□□□□□ -0.16
SMARCE1-218ENST00000582955 INSL6Q9Y581 213 aa14.06□□□□□ -0.16
SMARCE1-218ENST00000582955 A0A087WZ62 844 aa14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 DENND3A2RUS2 1198 aa14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 GAS2O43903 313 aaKnown RBP14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 ARHGEF15O94989 841 aa14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 EIF4BP23588 611 aaKnown RBP14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 RPA1P27694 616 aa14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 PRPHP41219 470 aa14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 RARRES1P49788 294 aa14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 ATP2C1P98194 919 aaPredicted RBP14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 PDIA5Q14554 519 aa14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 KSR1Q8IVT5 923 aa14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 SNX29Q8TEQ0 813 aa14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 TCP11Q8WWU5 503 aa14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 PSPC1Q8WXF1 523 aaKnown RBP14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 NACC1Q96RE7 527 aa14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 FDXACB1Q9BRP7 624 aaPredicted RBP14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 GCOM2Q9BZD3 368 aaPredicted RBP14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 PRDM12Q9H4Q4 367 aa14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 CERS4Q9HA82 394 aa14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 COL4A3BPQ9Y5P4 624 aa14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 CDH23Q9H251 3354 aa14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 ARID2Q68CP9 1835 aa14.05□□□□□ -0.16
SMARCE1-218ENST00000582955 USO1O60763 962 aaKnown RBP14.04□□□□□ -0.16
SMARCE1-218ENST00000582955 DGAT1O75907 488 aa14.04□□□□□ -0.16
SMARCE1-218ENST00000582955 XRCC6P12956 609 aaKnown RBP eCLIP14.04□□□□□ -0.16
SMARCE1-218ENST00000582955 DARSP14868 501 aaKnown RBP14.04□□□□□ -0.16
SMARCE1-218ENST00000582955 FOSL2P15408 326 aa14.04□□□□□ -0.16
SMARCE1-218ENST00000582955 FGFR4P22455 802 aa14.04□□□□□ -0.16
SMARCE1-218ENST00000582955 TAP1Q03518 808 aa14.04□□□□□ -0.16
SMARCE1-218ENST00000582955 IL17AQ16552 155 aa14.04□□□□□ -0.16
SMARCE1-218ENST00000582955 KRT79Q5XKE5 535 aa14.04□□□□□ -0.16
SMARCE1-218ENST00000582955 RTN4RL1Q86UN2 441 aaPredicted RBP14.04□□□□□ -0.16
SMARCE1-218ENST00000582955 ZNF410Q86VK4 478 aa14.04□□□□□ -0.16
SMARCE1-218ENST00000582955 IGSF22Q8N9C0 903 aa14.04□□□□□ -0.16
SMARCE1-218ENST00000582955 PRPF31Q8WWY3 499 aaKnown RBP14.04□□□□□ -0.16
SMARCE1-218ENST00000582955 ADAM2Q99965 735 aa14.04□□□□□ -0.16
SMARCE1-218ENST00000582955 TSPYL2Q9H2G4 693 aaPredicted RBP14.04□□□□□ -0.16
SMARCE1-218ENST00000582955 ATP6V0A4Q9HBG4 840 aa14.04□□□□□ -0.16
SMARCE1-218ENST00000582955 STXBP5LQ9Y2K9 1186 aa14.04□□□□□ -0.16
SMARCE1-218ENST00000582955 STK24Q9Y6E0 443 aa14.04□□□□□ -0.16
SMARCE1-218ENST00000582955 VWA3AA6NCI4 1184 aa14.03□□□□□ -0.16
SMARCE1-218ENST00000582955 PP2D1A8MPX8 630 aa14.03□□□□□ -0.16
SMARCE1-218ENST00000582955 STX6O43752 255 aa14.03□□□□□ -0.16
SMARCE1-218ENST00000582955 MGEA5O60502 916 aa14.03□□□□□ -0.16
SMARCE1-218ENST00000582955 CSDE1O75534 798 aaKnown RBP14.03□□□□□ -0.16
SMARCE1-218ENST00000582955 SRGAP2CP0DJJ0 459 aa14.03□□□□□ -0.16
SMARCE1-218ENST00000582955 HTRA4P83105 476 aaPredicted RBP14.03□□□□□ -0.16
SMARCE1-218ENST00000582955 LAMTOR4Q0VGL1 99 aa14.03□□□□□ -0.16
SMARCE1-218ENST00000582955 RESTQ13127 1097 aa14.03□□□□□ -0.16
SMARCE1-218ENST00000582955 NPAS4Q8IUM7 802 aa14.03□□□□□ -0.16
SMARCE1-218ENST00000582955 ARNTL2Q8WYA1 636 aa14.03□□□□□ -0.16
SMARCE1-218ENST00000582955 GAS2L1Q99501 681 aaPredicted RBP14.03□□□□□ -0.16
SMARCE1-218ENST00000582955 INO80BQ9C086 356 aaPredicted RBP14.03□□□□□ -0.16
SMARCE1-218ENST00000582955 XPNPEP1Q9NQW7 623 aa14.03□□□□□ -0.16
SMARCE1-218ENST00000582955 C1orf112Q9NSG2 853 aa14.03□□□□□ -0.16
SMARCE1-218ENST00000582955 DBR1Q9UK59 544 aaKnown RBP14.03□□□□□ -0.16
SMARCE1-218ENST00000582955 MTUS1Q9ULD2 1270 aa14.03□□□□□ -0.16
SMARCE1-218ENST00000582955 LRFN2Q9ULH4 789 aa14.03□□□□□ -0.16
SMARCE1-218ENST00000582955 MTMR6Q9Y217 621 aa14.03□□□□□ -0.16
SMARCE1-218ENST00000582955 LINC01553A4QN01 128 aa14.02□□□□□ -0.17
SMARCE1-218ENST00000582955 ARHGEF35A5YM69 484 aa14.02□□□□□ -0.17
SMARCE1-218ENST00000582955 ASAP2O43150 1006 aa14.02□□□□□ -0.17
SMARCE1-218ENST00000582955 BMP15O95972 392 aa14.02□□□□□ -0.17
SMARCE1-218ENST00000582955 STAG3L1P0CL83 205 aa14.02□□□□□ -0.17
SMARCE1-218ENST00000582955 ZSCAN20P17040 1043 aaPredicted RBP14.02□□□□□ -0.17
SMARCE1-218ENST00000582955 MUTP22033 750 aa14.02□□□□□ -0.17
SMARCE1-218ENST00000582955 SFPQP23246 707 aaKnown RBP eCLIP14.02□□□□□ -0.17
SMARCE1-218ENST00000582955 CDC25AP30304 524 aa14.02□□□□□ -0.17
SMARCE1-218ENST00000582955 SARSP49591 514 aaKnown RBP14.02□□□□□ -0.17
SMARCE1-218ENST00000582955 SF3A1Q15459 793 aaKnown RBP14.02□□□□□ -0.17
SMARCE1-218ENST00000582955 ZRSR1Q15695 479 aaKnown RBP14.02□□□□□ -0.17
SMARCE1-218ENST00000582955 ECM1Q16610 540 aa14.02□□□□□ -0.17
SMARCE1-218ENST00000582955 ARL6IP4Q66PJ3 421 aaKnown RBP14.02□□□□□ -0.17
SMARCE1-218ENST00000582955 FAM43BQ6ZT52 329 aaPredicted RBP14.02□□□□□ -0.17
SMARCE1-218ENST00000582955 MAEAQ7L5Y9 396 aa14.02□□□□□ -0.17
SMARCE1-218ENST00000582955 SPRED2Q7Z698 418 aa14.02□□□□□ -0.17
SMARCE1-218ENST00000582955 SPRYD3Q8NCJ5 442 aa14.02□□□□□ -0.17
SMARCE1-218ENST00000582955 RGS18Q9NS28 235 aa14.02□□□□□ -0.17
SMARCE1-218ENST00000582955 DDX19AQ9NUU7 478 aaKnown RBP14.02□□□□□ -0.17
SMARCE1-218ENST00000582955 KIAA1024Q9UPX6 916 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms