RNA–Protein interactions for RNA: ENST00000582665.5

NDEL1-214, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-214ENST00000582665 THPOP40225 353 aa11.13□□□□□ -0.63
NDEL1-214ENST00000582665 SYKP43405 635 aa11.13□□□□□ -0.63
NDEL1-214ENST00000582665 DNM2P50570 870 aa11.13□□□□□ -0.63
NDEL1-214ENST00000582665 ZNF131P52739 623 aa11.13□□□□□ -0.63
NDEL1-214ENST00000582665 MRPS6P82932 125 aaKnown RBP11.13□□□□□ -0.63
NDEL1-214ENST00000582665 FAM160A1Q05DH4 1040 aa11.13□□□□□ -0.63
NDEL1-214ENST00000582665 GIT2Q14161 759 aa11.13□□□□□ -0.63
NDEL1-214ENST00000582665 MBTPS1Q14703 1052 aa11.13□□□□□ -0.63
NDEL1-214ENST00000582665 LONRF3Q496Y0 759 aa11.13□□□□□ -0.63
NDEL1-214ENST00000582665 MFSD5Q6N075 450 aa11.13□□□□□ -0.63
NDEL1-214ENST00000582665 SV2BQ7L1I2 683 aa11.13□□□□□ -0.63
NDEL1-214ENST00000582665 RSPH3Q86UC2 560 aa11.13□□□□□ -0.63
NDEL1-214ENST00000582665 GPBP1Q86WP2 473 aa11.13□□□□□ -0.63
NDEL1-214ENST00000582665 IFNLR1Q8IU57 520 aaPredicted RBP11.13□□□□□ -0.63
NDEL1-214ENST00000582665 PRPF31Q8WWY3 499 aaKnown RBP11.13□□□□□ -0.63
NDEL1-214ENST00000582665 PSPC1Q8WXF1 523 aaKnown RBP11.13□□□□□ -0.63
NDEL1-214ENST00000582665 KCNN1Q92952 543 aa11.13□□□□□ -0.63
NDEL1-214ENST00000582665 TMEM143Q96AN5 459 aa11.13□□□□□ -0.63
NDEL1-214ENST00000582665 DHX58Q96C10 678 aa11.13□□□□□ -0.63
NDEL1-214ENST00000582665 DNAJC19Q96DA6 116 aa11.13□□□□□ -0.63
NDEL1-214ENST00000582665 MAP7D2Q96T17 732 aa11.13□□□□□ -0.63
NDEL1-214ENST00000582665 FAM49AQ9H0Q0 323 aaPredicted RBP11.13□□□□□ -0.63
NDEL1-214ENST00000582665 GPRC5CQ9NQ84 441 aa11.13□□□□□ -0.63
NDEL1-214ENST00000582665 ODF2LQ9ULJ1 636 aa11.13□□□□□ -0.63
NDEL1-214ENST00000582665 SQORQ9Y6N5 450 aa11.13□□□□□ -0.63
NDEL1-214ENST00000582665 CEP290O15078 2479 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 FRMD3A2A2Y4 597 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 GOLGA6L4A6NEF3 574 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 MYMKA6NI61 221 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 RSPH10B2B2RC85 870 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 PARNO95453 639 aaKnown RBP11.12□□□□□ -0.63
NDEL1-214ENST00000582665 CXCL10P02778 98 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 VTNP04004 478 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 RSPH10BP0C881 870 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 RAG1P15918 1043 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 LIG1P18858 919 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 GLRA2P23416 452 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 CYP2C18P33260 490 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 GPC3P51654 580 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 CRYBB1P53674 252 aaPredicted RBP11.12□□□□□ -0.63
NDEL1-214ENST00000582665 LAMTOR4Q0VGL1 99 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 MXD4Q14582 209 aaPredicted RBP11.12□□□□□ -0.63
NDEL1-214ENST00000582665 KRBA2Q6ZNG9 492 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 LRRC8DQ7L1W4 858 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 ZNF410Q86VK4 478 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 ELOA2Q8IYF1 753 aaPredicted RBP11.12□□□□□ -0.63
NDEL1-214ENST00000582665 ASAP3Q8TDY4 903 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 BSNDQ8WZ55 320 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 DDX12PQ92771 950 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 DPF3Q92784 378 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 KIFAP3Q92845 792 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 TIGD1Q96MW7 591 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 C7orf25Q9BPX7 421 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 REEP2Q9BRK0 252 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 NTPCRQ9BSD7 190 aaKnown RBP11.12□□□□□ -0.63
NDEL1-214ENST00000582665 NFKBIZQ9BYH8 718 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 CELF4Q9BZC1 486 aaKnown RBP11.12□□□□□ -0.63
NDEL1-214ENST00000582665 TRIM9Q9C026 710 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 POLR3FQ9H1D9 316 aaPredicted RBP11.12□□□□□ -0.63
NDEL1-214ENST00000582665 C17orf75Q9HAS0 396 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 CDHR5Q9HBB8 845 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 BMP2KQ9NSY1 1161 aaPredicted RBP11.12□□□□□ -0.63
NDEL1-214ENST00000582665 SERTAD1Q9UHV2 236 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 COL4A3BPQ9Y5P4 624 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 TRPV2Q9Y5S1 764 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 NR2E3Q9Y5X4 410 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 CDY2AQ9Y6F7 541 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 TANC1Q9C0D5 1861 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 PDE4DIPQ5VU43 2346 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 LTBP2Q14767 1821 aa11.12□□□□□ -0.63
NDEL1-214ENST00000582665 NBNO60934 754 aa11.11□□□□□ -0.63
NDEL1-214ENST00000582665 HIP1RO75146 1068 aa11.11□□□□□ -0.63
NDEL1-214ENST00000582665 NR1I2O75469 434 aa11.11□□□□□ -0.63
NDEL1-214ENST00000582665 CAPN15O75808 1086 aa11.11□□□□□ -0.63
NDEL1-214ENST00000582665 SSBP05455 408 aaKnown RBP eCLIP11.11□□□□□ -0.63
NDEL1-214ENST00000582665 MYL1P05976 194 aa11.11□□□□□ -0.63
NDEL1-214ENST00000582665 RFC2P35250 354 aa11.11□□□□□ -0.63
NDEL1-214ENST00000582665 NLRP11P59045 1033 aaKnown RBP11.11□□□□□ -0.63
NDEL1-214ENST00000582665 MDM2Q00987 491 aaPredicted RBP11.11□□□□□ -0.63
NDEL1-214ENST00000582665 CAPSQ13938 189 aa11.11□□□□□ -0.63
NDEL1-214ENST00000582665 KIZQ2M2Z5 673 aa11.11□□□□□ -0.63
NDEL1-214ENST00000582665 FBXO47Q5MNV8 452 aa11.11□□□□□ -0.63
NDEL1-214ENST00000582665 FAM102BQ5T8I3 360 aa11.11□□□□□ -0.63
NDEL1-214ENST00000582665 CDCA2Q69YH5 1023 aaPredicted RBP11.11□□□□□ -0.63
NDEL1-214ENST00000582665 FAM43BQ6ZT52 329 aaPredicted RBP11.11□□□□□ -0.63
NDEL1-214ENST00000582665 TMEM40Q8WWA1 233 aa11.11□□□□□ -0.63
NDEL1-214ENST00000582665 SPIRE2Q8WWL2 714 aa11.11□□□□□ -0.63
NDEL1-214ENST00000582665 PAGE5Q96GU1 130 aa11.11□□□□□ -0.63
NDEL1-214ENST00000582665 DRC1Q96MC2 740 aa11.11□□□□□ -0.63
NDEL1-214ENST00000582665 FIZ1Q96SL8 496 aa11.11□□□□□ -0.63
NDEL1-214ENST00000582665 OSBPL7Q9BZF2 842 aa11.11□□□□□ -0.63
NDEL1-214ENST00000582665 PPP1R12CQ9BZL4 782 aa11.11□□□□□ -0.63
NDEL1-214ENST00000582665 LRRC27Q9C0I9 530 aa11.11□□□□□ -0.63
NDEL1-214ENST00000582665 IFT122Q9HBG6 1241 aa11.11□□□□□ -0.63
NDEL1-214ENST00000582665 PRDM5Q9NQX1 630 aaPredicted RBP11.11□□□□□ -0.63
NDEL1-214ENST00000582665 AKT3Q9Y243 479 aa11.11□□□□□ -0.63
NDEL1-214ENST00000582665 SIP14410 1827 aa11.11□□□□□ -0.63
NDEL1-214ENST00000582665 A0A087WZ62 844 aa11.1□□□□□ -0.63
NDEL1-214ENST00000582665 NPHP3-ACAD11A0A0J9YXS1 232 aa11.1□□□□□ -0.63
NDEL1-214ENST00000582665 CTSHP09668 335 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms