RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 SEMA3FQ13275 785 aa11.68□□□□□ -0.54
CDK5RAP3-225ENST00000582482 PPP2R5CQ13362 524 aa11.68□□□□□ -0.54
CDK5RAP3-225ENST00000582482 SCARA3Q6AZY7 606 aa11.68□□□□□ -0.54
CDK5RAP3-225ENST00000582482 WDR93Q6P2C0 686 aa11.68□□□□□ -0.54
CDK5RAP3-225ENST00000582482 PADI6Q6TGC4 694 aa11.68□□□□□ -0.54
CDK5RAP3-225ENST00000582482 MIER3Q7Z3K6 550 aa11.68□□□□□ -0.54
CDK5RAP3-225ENST00000582482 SYCP3Q8IZU3 236 aa11.68□□□□□ -0.54
CDK5RAP3-225ENST00000582482 SPOCK2Q92563 424 aa11.68□□□□□ -0.54
CDK5RAP3-225ENST00000582482 TEPSINQ96N21 525 aa11.68□□□□□ -0.54
CDK5RAP3-225ENST00000582482 NAP1L4Q99733 375 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-225ENST00000582482 MXRA8Q9BRK3 442 aa11.68□□□□□ -0.54
CDK5RAP3-225ENST00000582482 FAM204AQ9H8W3 233 aa11.68□□□□□ -0.54
CDK5RAP3-225ENST00000582482 NAGPAQ9UK23 515 aa11.68□□□□□ -0.54
CDK5RAP3-225ENST00000582482 NFU1Q9UMS0 254 aa11.68□□□□□ -0.54
CDK5RAP3-225ENST00000582482 NR2E1Q9Y466 385 aa11.68□□□□□ -0.54
CDK5RAP3-225ENST00000582482 SSU72P8A0A1W2PR75 194 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 ANO9A1A5B4 782 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 PJA2O43164 708 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 USP8P40818 1118 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 PTGER2P43116 358 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 GUCY2DQ02846 1103 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 PPP3CAQ08209 521 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 DRAP1Q14919 205 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 TAF3Q5VWG9 929 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 PHLDB3Q6NSJ2 640 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 ALKBH5Q6P6C2 394 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 ZNF662Q6ZS27 426 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 FRMD5Q7Z6J6 570 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 CHURC1Q8WUH1 139 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 TEKT3Q9BXF9 490 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 LRRC4CQ9HCJ2 640 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 AIPL1Q9NZN9 384 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 DNAJC12Q9UKB3 198 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 MRPL11Q9Y3B7 192 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 EXOC3O60645 756 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 ECM2O94769 699 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 FMO5P49326 533 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 CKAP4Q07065 602 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 ZNF211Q13398 564 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 TKFCQ3LXA3 575 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 LMBRD2Q68DH5 695 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 KCTD16Q68DU8 428 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 GBP6Q6ZN66 633 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 SH2D3CQ8N5H7 860 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 SYTL5Q8TDW5 730 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 RPAP3Q9H6T3 665 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 EPB41L5Q9HCM4 733 aa11.67□□□□□ -0.54
CDK5RAP3-225ENST00000582482 FRMPD4Q14CM0 1322 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 TMEM110-MUSTN1A8MSY1 372 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 NFKBIEO00221 500 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 GNA14O95837 355 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 VCAM1P19320 739 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 PEX3P56589 373 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 MICALL2Q8IY33 904 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 SUPT20HQ8NEM7 779 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 CCDC127Q96BQ5 260 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 BTBD6Q96KE9 485 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 R3HDMLQ9H3Y0 253 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 EMSYQ7Z589 1322 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 ANKRD63C9JTQ0 380 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 FOXN3O00409 490 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 CEP104O60308 925 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 HEXIM1O94992 359 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 JAM2P57087 298 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 TUBB2AQ13885 445 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 EPC2Q52LR7 807 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 C2CD6Q53TS8 623 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 MEI1Q5TIA1 1274 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 C8orf74Q6P047 294 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 BSNDQ8WZ55 320 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 ARL8AQ96BM9 186 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 TUBB2BQ9BVA1 445 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 CELF4Q9BZC1 486 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 INTS2Q9H0H0 1204 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 LCMT1Q9UIC8 334 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 FAM184BQ9ULE4 1060 aa11.66□□□□□ -0.54
CDK5RAP3-225ENST00000582482 ATAD5Q96QE3 1844 aa11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 A0A0U1RQG5 324 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 F8VZ95 297 aa11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 POTEB2H3BUK9 544 aa11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 RAD51CO43502 376 aa11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 ICAM1P05362 532 aa11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 ADRB2P07550 413 aa11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 GMPSP49915 693 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 GALCP54803 685 aa11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 MTMR1Q13613 665 aa11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 BMT2Q1RMZ1 405 aa11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 FAM102BQ5T8I3 360 aa11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 RTKN2Q8IZC4 609 aa11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 AENQ8WTP8 325 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 CASKIN2Q8WXE0 1202 aa11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 TRIM31Q9BZY9 425 aa11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 DDX47Q9H0S4 455 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 THAP2Q9H0W7 228 aa11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 AGO4Q9HCK5 861 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 TUFT1Q9NNX1 390 aa11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 PLCB1Q9NQ66 1216 aa11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 HACL1Q9UJ83 578 aa11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 FEM1BQ9UK73 627 aa11.65□□□□□ -0.54
CDK5RAP3-225ENST00000582482 KRT14P02533 472 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms