RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 FAM111BQ6SJ93 734 aa6.77□□□□□ -1.33
SMCHD1-207ENST00000581711 SPATC1Q76KD6 591 aa6.77□□□□□ -1.33
SMCHD1-207ENST00000581711 NOSTRINQ8IVI9 506 aa6.77□□□□□ -1.33
SMCHD1-207ENST00000581711 ZNF276Q8N554 614 aa6.77□□□□□ -1.33
SMCHD1-207ENST00000581711 RPL10LQ96L21 214 aaKnown RBP6.77□□□□□ -1.33
SMCHD1-207ENST00000581711 TRPS1Q9UHF7 1281 aa6.77□□□□□ -1.33
SMCHD1-207ENST00000581711 ZNHIT2Q9UHR6 403 aa6.77□□□□□ -1.33
SMCHD1-207ENST00000581711 ASB1Q9Y576 335 aa6.77□□□□□ -1.33
SMCHD1-207ENST00000581711 KLRG2A4D1S0 409 aaPredicted RBP6.76□□□□□ -1.33
SMCHD1-207ENST00000581711 RASSF10A6NK89 507 aa6.76□□□□□ -1.33
SMCHD1-207ENST00000581711 SCDO00767 359 aa6.76□□□□□ -1.33
SMCHD1-207ENST00000581711 DNM2P50570 870 aa6.76□□□□□ -1.33
SMCHD1-207ENST00000581711 ADAM8P78325 824 aa6.76□□□□□ -1.33
SMCHD1-207ENST00000581711 SYNE4Q8N205 404 aa6.76□□□□□ -1.33
SMCHD1-207ENST00000581711 CALML6Q8TD86 181 aa6.76□□□□□ -1.33
SMCHD1-207ENST00000581711 KCNH7Q9NS40 1196 aa6.76□□□□□ -1.33
SMCHD1-207ENST00000581711 SIRPGQ9P1W8 387 aa6.76□□□□□ -1.33
SMCHD1-207ENST00000581711 PFDN2Q9UHV9 154 aa6.76□□□□□ -1.33
SMCHD1-207ENST00000581711 FOXP2O15409 715 aa6.75□□□□□ -1.33
SMCHD1-207ENST00000581711 PDPK1O15530 556 aa6.75□□□□□ -1.33
SMCHD1-207ENST00000581711 H2AFYO75367 372 aaKnown RBP6.75□□□□□ -1.33
SMCHD1-207ENST00000581711 NAT1P18440 290 aa6.75□□□□□ -1.33
SMCHD1-207ENST00000581711 SESN2P58004 480 aaPredicted RBP6.75□□□□□ -1.33
SMCHD1-207ENST00000581711 C21orf58P58505 322 aa6.75□□□□□ -1.33
SMCHD1-207ENST00000581711 BPIFB4P59827 614 aa6.75□□□□□ -1.33
SMCHD1-207ENST00000581711 RASA3Q14644 834 aa6.75□□□□□ -1.33
SMCHD1-207ENST00000581711 NBPF6Q5VWK0 638 aa6.75□□□□□ -1.33
SMCHD1-207ENST00000581711 ZKSCAN2Q63HK3 967 aa6.75□□□□□ -1.33
SMCHD1-207ENST00000581711 FSTL4Q6MZW2 842 aa6.75□□□□□ -1.33
SMCHD1-207ENST00000581711 ANKRD53Q8N9V6 530 aa6.75□□□□□ -1.33
SMCHD1-207ENST00000581711 GCDHQ92947 438 aaPredicted RBP6.75□□□□□ -1.33
SMCHD1-207ENST00000581711 NBPF4Q96M43 638 aa6.75□□□□□ -1.33
SMCHD1-207ENST00000581711 SNTG2Q9NY99 539 aa6.75□□□□□ -1.33
SMCHD1-207ENST00000581711 RBM8AQ9Y5S9 174 aaKnown RBP6.75□□□□□ -1.33
SMCHD1-207ENST00000581711 UBE2QL1A1L167 161 aa6.74□□□□□ -1.33
SMCHD1-207ENST00000581711 GRID2IPA4D2P6 1211 aa6.74□□□□□ -1.33
SMCHD1-207ENST00000581711 C6orf222P0C671 652 aaPredicted RBP6.74□□□□□ -1.33
SMCHD1-207ENST00000581711 HTR3DQ70Z44 454 aa6.74□□□□□ -1.33
SMCHD1-207ENST00000581711 ZC3H7AQ8IWR0 971 aaKnown RBP6.74□□□□□ -1.33
SMCHD1-207ENST00000581711 CISD2Q8N5K1 135 aaKnown RBP6.74□□□□□ -1.33
SMCHD1-207ENST00000581711 PROKR1Q8TCW9 393 aa6.74□□□□□ -1.33
SMCHD1-207ENST00000581711 GFM2Q969S9 779 aaKnown RBP6.74□□□□□ -1.33
SMCHD1-207ENST00000581711 PGBD4Q96DM1 585 aa6.74□□□□□ -1.33
SMCHD1-207ENST00000581711 BBC3Q96PG8 261 aaPredicted RBP6.74□□□□□ -1.33
SMCHD1-207ENST00000581711 DEPDC7Q96QD5 511 aa6.74□□□□□ -1.33
SMCHD1-207ENST00000581711 ADARB2Q9NS39 739 aaKnown RBP6.74□□□□□ -1.33
SMCHD1-207ENST00000581711 FZD1Q9UP38 647 aa6.74□□□□□ -1.33
SMCHD1-207ENST00000581711 PCDHA9Q9Y5H5 950 aa6.74□□□□□ -1.33
SMCHD1-207ENST00000581711 C2orf78A6NCI8 922 aa6.73□□□□□ -1.33
SMCHD1-207ENST00000581711 ZAR1LA6NP61 321 aa6.73□□□□□ -1.33
SMCHD1-207ENST00000581711 GOLGA6L22H0YM25 854 aa6.73□□□□□ -1.33
SMCHD1-207ENST00000581711 DIAPH1O60610 1272 aaKnown RBP6.73□□□□□ -1.33
SMCHD1-207ENST00000581711 NR4A1P22736 598 aa6.73□□□□□ -1.33
SMCHD1-207ENST00000581711 TCIRG1Q13488 830 aa6.73□□□□□ -1.33
SMCHD1-207ENST00000581711 PTPAQ15257 358 aa6.73□□□□□ -1.33
SMCHD1-207ENST00000581711 MTERF2Q49AM1 385 aa6.73□□□□□ -1.33
SMCHD1-207ENST00000581711 LY6G5CQ5SRR4 150 aa6.73□□□□□ -1.33
SMCHD1-207ENST00000581711 UBXN4Q92575 508 aa6.73□□□□□ -1.33
SMCHD1-207ENST00000581711 ZNF669Q96BR6 464 aaPredicted RBP6.73□□□□□ -1.33
SMCHD1-207ENST00000581711 SRPK1Q96SB4 655 aaKnown RBP6.73□□□□□ -1.33
SMCHD1-207ENST00000581711 MNTQ99583 582 aa6.73□□□□□ -1.33
SMCHD1-207ENST00000581711 TCF25Q9BQ70 676 aa6.73□□□□□ -1.33
SMCHD1-207ENST00000581711 SPATA9Q9BWV2 254 aa6.73□□□□□ -1.33
SMCHD1-207ENST00000581711 CCDC113Q9H0I3 377 aa6.73□□□□□ -1.33
SMCHD1-207ENST00000581711 IL23AQ9NPF7 189 aa6.73□□□□□ -1.33
SMCHD1-207ENST00000581711 GOLGA8BA8MQT2 603 aa6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 GOLGA6L6A8MZA4 724 aa6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 ABHD16AO95870 558 aa6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 ITGB1P05556 798 aa6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 KRTAP10-11P60412 298 aa6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 SUMO1P63165 101 aaKnown RBP6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 RASGRF1Q13972 1273 aa6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 BMS1Q14692 1282 aaKnown RBP6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 FKBP15Q5T1M5 1219 aa6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 C1QL3Q5VWW1 255 aa6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 SYCE2Q6PIF2 218 aa6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 LRRC55Q6ZSA7 311 aa6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 GLCCI1Q86VQ1 547 aa6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 ADGRG3Q86Y34 549 aa6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 ELOA2Q8IYF1 753 aaPredicted RBP6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 THAP3Q8WTV1 239 aaPredicted RBP6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 ATXN2LQ8WWM7 1075 aaKnown RBP6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 OSBPL2Q9H1P3 480 aa6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 USP35Q9P2H5 1018 aa6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 SAE1Q9UBE0 346 aaPredicted RBP6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 MAGEL2Q9UJ55 1249 aa6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 DENND2AQ9ULE3 1009 aa6.72□□□□□ -1.33
SMCHD1-207ENST00000581711 TRBV23-1A0A0A0MS06 115 aa6.71□□□□□ -1.34
SMCHD1-207ENST00000581711 GRXCR1A8MXD5 290 aa6.71□□□□□ -1.34
SMCHD1-207ENST00000581711 ADCY3O60266 1144 aa6.71□□□□□ -1.34
SMCHD1-207ENST00000581711 CRTAMO95727 393 aa6.71□□□□□ -1.34
SMCHD1-207ENST00000581711 SDHAP31040 664 aa6.71□□□□□ -1.34
SMCHD1-207ENST00000581711 GAGE13Q4V321 117 aa6.71□□□□□ -1.34
SMCHD1-207ENST00000581711 KCNV1Q6PIU1 500 aa6.71□□□□□ -1.34
SMCHD1-207ENST00000581711 MB21D1Q8N884 522 aa6.71□□□□□ -1.34
SMCHD1-207ENST00000581711 DNAJC7Q99615 494 aa6.71□□□□□ -1.34
SMCHD1-207ENST00000581711 CDC6Q99741 560 aa6.71□□□□□ -1.34
SMCHD1-207ENST00000581711 B3GALT1Q9Y5Z6 326 aa6.71□□□□□ -1.34
SMCHD1-207ENST00000581711 HS3ST4Q9Y661 456 aa6.71□□□□□ -1.34
SMCHD1-207ENST00000581711 ALDH6A1Q02252 535 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms