RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 FSCN2O14926 492 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 PER2O15055 1255 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 MSH4O15457 936 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 HOXA2O43364 376 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 FGFR1P11362 822 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 LAG3P18627 525 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 IBSPP21815 317 aaPredicted RBP11.98□□□□□ -0.49
RFFL-209ENST00000581265 PSMA5P28066 241 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 PDIA3P30101 505 aaKnown RBP11.98□□□□□ -0.49
RFFL-209ENST00000581265 CLCN3P51790 818 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 SIGLEC14Q08ET2 396 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 KCNC3Q14003 757 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 CBX2Q14781 532 aaPredicted RBP11.98□□□□□ -0.49
RFFL-209ENST00000581265 DUSP6Q16828 381 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 TMEM184AQ6ZMB5 413 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 LRRC55Q6ZSA7 311 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 THNSL1Q8IYQ7 743 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 CCDC148Q8NFR7 591 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 RASGRP4Q8TDF6 673 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 CASD1Q96PB1 797 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 MAP7D2Q96T17 732 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 PPP1R16BQ96T49 567 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 SH3GLB2Q9NR46 395 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 HCSTQ9UBK5 93 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 PUF60Q9UHX1 559 aaKnown RBP11.98□□□□□ -0.49
RFFL-209ENST00000581265 BARX2Q9UMQ3 279 aaPredicted RBP11.98□□□□□ -0.49
RFFL-209ENST00000581265 USP15Q9Y4E8 981 aaPredicted RBP11.98□□□□□ -0.49
RFFL-209ENST00000581265 TECTAO75443 2155 aa11.98□□□□□ -0.49
RFFL-209ENST00000581265 FNDC1Q4ZHG4 1894 aaPredicted RBP11.97□□□□□ -0.49
RFFL-209ENST00000581265 OATP04181 439 aa11.97□□□□□ -0.49
RFFL-209ENST00000581265 ZSCAN20P17040 1043 aaPredicted RBP11.97□□□□□ -0.49
RFFL-209ENST00000581265 ATF7P17544 494 aaPredicted RBP11.97□□□□□ -0.49
RFFL-209ENST00000581265 SFNP31947 248 aa11.97□□□□□ -0.49
RFFL-209ENST00000581265 VCPP55072 806 aaKnown RBP11.97□□□□□ -0.49
RFFL-209ENST00000581265 ASCL5Q7RTU5 278 aa11.97□□□□□ -0.49
RFFL-209ENST00000581265 ZBTB33Q86T24 672 aa11.97□□□□□ -0.49
RFFL-209ENST00000581265 VN1R2Q8NFZ6 395 aa11.97□□□□□ -0.49
RFFL-209ENST00000581265 SUSD6Q92537 303 aa11.97□□□□□ -0.49
RFFL-209ENST00000581265 MRPS27Q92552 414 aaKnown RBP11.97□□□□□ -0.49
RFFL-209ENST00000581265 SLC5A5Q92911 643 aa11.97□□□□□ -0.49
RFFL-209ENST00000581265 CCDC136Q96JN2 1154 aa11.97□□□□□ -0.49
RFFL-209ENST00000581265 PHF7Q9BWX1 381 aaPredicted RBP11.97□□□□□ -0.49
RFFL-209ENST00000581265 RNF19AQ9NV58 838 aa11.97□□□□□ -0.49
RFFL-209ENST00000581265 VPS54Q9P1Q0 977 aa11.97□□□□□ -0.49
RFFL-209ENST00000581265 AKT3Q9Y243 479 aa11.97□□□□□ -0.49
RFFL-209ENST00000581265 KIAA1671Q9BY89 1806 aa11.97□□□□□ -0.49
RFFL-209ENST00000581265 CYP3A7-CYP3A51PA0A087WV96 503 aa11.96□□□□□ -0.49
RFFL-209ENST00000581265 A0A0U1RQF3 1178 aa11.96□□□□□ -0.49
RFFL-209ENST00000581265 PRR23AA6NEV1 266 aa11.96□□□□□ -0.49
RFFL-209ENST00000581265 PROB1E7EW31 1015 aa11.96□□□□□ -0.49
RFFL-209ENST00000581265 GAS7O60861 476 aa11.96□□□□□ -0.49
RFFL-209ENST00000581265 PSMD10O75832 226 aa11.96□□□□□ -0.49
RFFL-209ENST00000581265 EOMESO95936 686 aa11.96□□□□□ -0.49
RFFL-209ENST00000581265 DARSP14868 501 aaKnown RBP11.96□□□□□ -0.49
RFFL-209ENST00000581265 CYP3A7P24462 503 aa11.96□□□□□ -0.49
RFFL-209ENST00000581265 GPC3P51654 580 aa11.96□□□□□ -0.49
RFFL-209ENST00000581265 JAK3P52333 1124 aa11.96□□□□□ -0.49
RFFL-209ENST00000581265 NUBP1P53384 320 aa11.96□□□□□ -0.49
RFFL-209ENST00000581265 RBM10P98175 930 aaKnown RBP11.96□□□□□ -0.49
RFFL-209ENST00000581265 CDC42EP1Q00587 391 aa11.96□□□□□ -0.49
RFFL-209ENST00000581265 TARBP2Q15633 366 aaKnown RBP11.96□□□□□ -0.49
RFFL-209ENST00000581265 KCNT2Q6UVM3 1135 aa11.96□□□□□ -0.49
RFFL-209ENST00000581265 ECHDC2Q86YB7 292 aa11.96□□□□□ -0.49
RFFL-209ENST00000581265 LRRC71Q8N4P6 559 aa11.96□□□□□ -0.49
RFFL-209ENST00000581265 RDM1Q8NG50 284 aa11.96□□□□□ -0.49
RFFL-209ENST00000581265 SLC26A6Q9BXS9 759 aa11.96□□□□□ -0.49
RFFL-209ENST00000581265 NIFKQ9BYG3 293 aaKnown RBP11.96□□□□□ -0.49
RFFL-209ENST00000581265 C22orf23Q9BZE7 217 aa11.96□□□□□ -0.49
RFFL-209ENST00000581265 S1PR5Q9H228 398 aa11.96□□□□□ -0.49
RFFL-209ENST00000581265 NGRNQ9NPE2 291 aaKnown RBP11.96□□□□□ -0.49
RFFL-209ENST00000581265 C5orf42Q9H799 3197 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 PLXNA4Q9HCM2 1894 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 ZDBF2Q9HCK1 2354 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 REC8O95072 547 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 PPM1AP35813 382 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 NLRP5P59047 1200 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 CCT2P78371 535 aaKnown RBP11.95□□□□□ -0.5
RFFL-209ENST00000581265 PRKCEQ02156 737 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 KRT17Q04695 432 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 TBC1D8BQ0IIM8 1120 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 UGCGQ16739 394 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 Q4G0T1 1027 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 LRCH2Q5VUJ6 765 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 B3GNT9Q6UX72 402 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 ZNF598Q86UK7 904 aaKnown RBP11.95□□□□□ -0.5
RFFL-209ENST00000581265 ABI1Q8IZP0 508 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 LRRC43Q8N309 656 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 TBCKQ8TEA7 893 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 RPGRIP1Q96KN7 1286 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 ZNF558Q96NG5 402 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 TCF25Q9BQ70 676 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 TRAIPQ9BWF2 469 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 TEKT3Q9BXF9 490 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 UNC45AQ9H3U1 944 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 NCOA5Q9HCD5 579 aaKnown RBP11.95□□□□□ -0.5
RFFL-209ENST00000581265 CHST12Q9NRB3 414 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 DACT1Q9NYF0 836 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 SPG21Q9NZD8 308 aa11.95□□□□□ -0.5
RFFL-209ENST00000581265 ZFHX2Q9C0A1 2572 aaPredicted RBP11.94□□□□□ -0.5
RFFL-209ENST00000581265 TRIOO75962 3097 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms