RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 NKX2-4Q9H2Z4 354 aa18.3■□□□□ 0.52
IFT20-210ENST00000580357 C1orf112Q9NSG2 853 aa18.3■□□□□ 0.52
IFT20-210ENST00000580357 FOXD4L1Q9NU39 408 aa18.3■□□□□ 0.52
IFT20-210ENST00000580357 ZBTB39O15060 712 aa18.29■□□□□ 0.52
IFT20-210ENST00000580357 SLC26A4O43511 780 aa18.29■□□□□ 0.52
IFT20-210ENST00000580357 MED24O75448 989 aa18.29■□□□□ 0.52
IFT20-210ENST00000580357 DARSP14868 501 aaKnown RBP18.29■□□□□ 0.52
IFT20-210ENST00000580357 ZSCAN20P17040 1043 aaPredicted RBP18.29■□□□□ 0.52
IFT20-210ENST00000580357 RARRES1P49788 294 aa18.29■□□□□ 0.52
IFT20-210ENST00000580357 POU5F1BQ06416 359 aa18.29■□□□□ 0.52
IFT20-210ENST00000580357 RHPN2Q8IUC4 686 aa18.29■□□□□ 0.52
IFT20-210ENST00000580357 PIGOQ8TEQ8 1089 aa18.29■□□□□ 0.52
IFT20-210ENST00000580357 AK8Q96MA6 479 aa18.29■□□□□ 0.52
IFT20-210ENST00000580357 ATP6V0A4Q9HBG4 840 aa18.29■□□□□ 0.52
IFT20-210ENST00000580357 YBX2Q9Y2T7 364 aaKnown RBP18.29■□□□□ 0.52
IFT20-210ENST00000580357 DENND3A2RUS2 1198 aa18.28■□□□□ 0.52
IFT20-210ENST00000580357 HTRA4P83105 476 aaPredicted RBP18.28■□□□□ 0.52
IFT20-210ENST00000580357 EMC2Q15006 297 aa18.28■□□□□ 0.52
IFT20-210ENST00000580357 PPP2R2DQ66LE6 453 aa18.28■□□□□ 0.52
IFT20-210ENST00000580357 SRGAP1Q7Z6B7 1085 aa18.28■□□□□ 0.52
IFT20-210ENST00000580357 RTN4RL1Q86UN2 441 aaPredicted RBP18.28■□□□□ 0.52
IFT20-210ENST00000580357 FERMT3Q86UX7 667 aa18.28■□□□□ 0.52
IFT20-210ENST00000580357 TMEM40Q8WWA1 233 aa18.28■□□□□ 0.52
IFT20-210ENST00000580357 PRPF31Q8WWY3 499 aaKnown RBP18.28■□□□□ 0.52
IFT20-210ENST00000580357 PPP1R16BQ96T49 567 aa18.28■□□□□ 0.52
IFT20-210ENST00000580357 TTYH1Q9H313 450 aaPredicted RBP18.28■□□□□ 0.52
IFT20-210ENST00000580357 CHST12Q9NRB3 414 aa18.28■□□□□ 0.52
IFT20-210ENST00000580357 RGS18Q9NS28 235 aa18.28■□□□□ 0.52
IFT20-210ENST00000580357 DNM3Q9UQ16 869 aa18.28■□□□□ 0.52
IFT20-210ENST00000580357 MTMR6Q9Y217 621 aa18.28■□□□□ 0.52
IFT20-210ENST00000580357 COL4A3BPQ9Y5P4 624 aa18.28■□□□□ 0.52
IFT20-210ENST00000580357 A0A087WZ62 844 aa18.27■□□□□ 0.52
IFT20-210ENST00000580357 ARHGEF35A5YM69 484 aa18.27■□□□□ 0.52
IFT20-210ENST00000580357 UPP2O95045 317 aa18.27■□□□□ 0.52
IFT20-210ENST00000580357 DRP2Q13474 957 aa18.27■□□□□ 0.52
IFT20-210ENST00000580357 TFDP1Q14186 410 aa18.27■□□□□ 0.52
IFT20-210ENST00000580357 PCBP1Q15365 356 aaKnown RBP eCLIP18.27■□□□□ 0.52
IFT20-210ENST00000580357 SLC24A5Q71RS6 500 aa18.27■□□□□ 0.52
IFT20-210ENST00000580357 FAM228AQ86W67 206 aa18.27■□□□□ 0.52
IFT20-210ENST00000580357 MCPH1Q8NEM0 835 aa18.27■□□□□ 0.52
IFT20-210ENST00000580357 SNX29Q8TEQ0 813 aa18.27■□□□□ 0.52
IFT20-210ENST00000580357 TMEM143Q96AN5 459 aa18.27■□□□□ 0.52
IFT20-210ENST00000580357 FDXACB1Q9BRP7 624 aaPredicted RBP18.27■□□□□ 0.52
IFT20-210ENST00000580357 NT5C3AQ9H0P0 336 aa18.27■□□□□ 0.52
IFT20-210ENST00000580357 VWA3AA6NCI4 1184 aa18.26■□□□□ 0.51
IFT20-210ENST00000580357 CA3P07451 260 aa18.26■□□□□ 0.51
IFT20-210ENST00000580357 MYOGP15173 224 aa18.26■□□□□ 0.51
IFT20-210ENST00000580357 SFPQP23246 707 aaKnown RBP eCLIP18.26■□□□□ 0.51
IFT20-210ENST00000580357 LONP1P36776 959 aaKnown RBP18.26■□□□□ 0.51
IFT20-210ENST00000580357 SARSP49591 514 aaKnown RBP18.26■□□□□ 0.51
IFT20-210ENST00000580357 LAMTOR4Q0VGL1 99 aa18.26■□□□□ 0.51
IFT20-210ENST00000580357 RESTQ13127 1097 aa18.26■□□□□ 0.51
IFT20-210ENST00000580357 SF3A1Q15459 793 aaKnown RBP18.26■□□□□ 0.51
IFT20-210ENST00000580357 IL17AQ16552 155 aa18.26■□□□□ 0.51
IFT20-210ENST00000580357 NPAS4Q8IUM7 802 aa18.26■□□□□ 0.51
IFT20-210ENST00000580357 FAM161BQ96MY7 647 aa18.26■□□□□ 0.51
IFT20-210ENST00000580357 YME1L1Q96TA2 773 aa18.26■□□□□ 0.51
IFT20-210ENST00000580357 ADAM2Q99965 735 aa18.26■□□□□ 0.51
IFT20-210ENST00000580357 TMX1Q9H3N1 280 aa18.26■□□□□ 0.51
IFT20-210ENST00000580357 DACT1Q9NYF0 836 aa18.26■□□□□ 0.51
IFT20-210ENST00000580357 LRFN2Q9ULH4 789 aa18.26■□□□□ 0.51
IFT20-210ENST00000580357 KIAA1024Q9UPX6 916 aa18.26■□□□□ 0.51
IFT20-210ENST00000580357 PCDHB7Q9Y5E2 793 aa18.26■□□□□ 0.51
IFT20-210ENST00000580357 SRGAP2CP0DJJ0 459 aa18.25■□□□□ 0.51
IFT20-210ENST00000580357 FAM189BP81408 668 aa18.25■□□□□ 0.51
IFT20-210ENST00000580357 FAM117BQ6P1L5 589 aa18.25■□□□□ 0.51
IFT20-210ENST00000580357 POTEGQ6S5H5 508 aa18.25■□□□□ 0.51
IFT20-210ENST00000580357 NLRP4Q96MN2 994 aa18.25■□□□□ 0.51
IFT20-210ENST00000580357 SAMD11Q96NU1 681 aa18.25■□□□□ 0.51
IFT20-210ENST00000580357 CDX2Q99626 313 aaPredicted RBP18.25■□□□□ 0.51
IFT20-210ENST00000580357 ELAC1Q9H777 363 aaKnown RBP18.25■□□□□ 0.51
IFT20-210ENST00000580357 DDX19AQ9NUU7 478 aaKnown RBP18.25■□□□□ 0.51
IFT20-210ENST00000580357 DAXXQ9UER7 740 aaPredicted RBP18.25■□□□□ 0.51
IFT20-210ENST00000580357 MICAL3Q7RTP6 2002 aa18.24■□□□□ 0.51
IFT20-210ENST00000580357 EYA4O95677 639 aa18.24■□□□□ 0.51
IFT20-210ENST00000580357 SKIP12755 728 aa18.24■□□□□ 0.51
IFT20-210ENST00000580357 CYP11B2P19099 503 aa18.24■□□□□ 0.51
IFT20-210ENST00000580357 ARL2P36404 184 aa18.24■□□□□ 0.51
IFT20-210ENST00000580357 PHKA2P46019 1235 aa18.24■□□□□ 0.51
IFT20-210ENST00000580357 TAP1Q03518 808 aa18.24■□□□□ 0.51
IFT20-210ENST00000580357 NCBP1Q09161 790 aaKnown RBP18.24■□□□□ 0.51
IFT20-210ENST00000580357 BECN1Q14457 450 aa18.24■□□□□ 0.51
IFT20-210ENST00000580357 DSC3Q14574 896 aa18.24■□□□□ 0.51
IFT20-210ENST00000580357 GRIN2CQ14957 1233 aa18.24■□□□□ 0.51
IFT20-210ENST00000580357 HYIQ5T013 277 aa18.24■□□□□ 0.51
IFT20-210ENST00000580357 PADI6Q6TGC4 694 aa18.24■□□□□ 0.51
IFT20-210ENST00000580357 TMCO2Q7Z6W1 182 aaPredicted RBP18.24■□□□□ 0.51
IFT20-210ENST00000580357 SP7Q8TDD2 431 aaPredicted RBP18.24■□□□□ 0.51
IFT20-210ENST00000580357 CDK5RAP3Q96JB5 506 aa18.24■□□□□ 0.51
IFT20-210ENST00000580357 ZNF396Q96N95 335 aaPredicted RBP18.24■□□□□ 0.51
IFT20-210ENST00000580357 TGS1Q96RS0 853 aaKnown RBP18.24■□□□□ 0.51
IFT20-210ENST00000580357 GAS2L1Q99501 681 aaPredicted RBP18.24■□□□□ 0.51
IFT20-210ENST00000580357 COL25A1Q9BXS0 654 aaPredicted RBP18.24■□□□□ 0.51
IFT20-210ENST00000580357 IFT122Q9HBG6 1241 aa18.24■□□□□ 0.51
IFT20-210ENST00000580357 XPNPEP1Q9NQW7 623 aa18.24■□□□□ 0.51
IFT20-210ENST00000580357 MORC2Q9Y6X9 1032 aaPredicted RBP18.24■□□□□ 0.51
IFT20-210ENST00000580357 A0A087WWV3 80 aa18.23■□□□□ 0.51
IFT20-210ENST00000580357 C9IYK1 514 aa18.23■□□□□ 0.51
IFT20-210ENST00000580357 USO1O60763 962 aaKnown RBP18.23■□□□□ 0.51
IFT20-210ENST00000580357 DGKIO75912 1065 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms