RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.94□□□□□ -0.98
COPS3-215ENST00000578317 SFI1A8K8P3 1242 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 DDX39AO00148 427 aaKnown RBP8.94□□□□□ -0.98
COPS3-215ENST00000578317 CTAGE5O15320 804 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 CHMP2AO43633 222 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 MYL1P05976 194 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 SUPT20HL2P0C7V6 817 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 HSPA8P11142 646 aaKnown RBP8.94□□□□□ -0.98
COPS3-215ENST00000578317 PLCG1P19174 1290 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 GRK4P32298 578 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 SLC26A2P50443 739 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 PKN2Q16513 984 aaKnown RBP8.94□□□□□ -0.98
COPS3-215ENST00000578317 OCLNQ16625 522 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 DNAJC14Q6Y2X3 702 aaPredicted RBP8.94□□□□□ -0.98
COPS3-215ENST00000578317 TAS1R3Q7RTX0 852 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 PDILTQ8N807 584 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 CNNM3Q8NE01 707 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 ATP6V0A1Q93050 837 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 SYAP1Q96A49 352 aaPredicted RBP8.94□□□□□ -0.98
COPS3-215ENST00000578317 DYDC2Q96IM9 177 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 CDK5RAP3Q96JB5 506 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 BLOC1S4Q9NUP1 217 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 HOOK1Q9UJC3 728 aaKnown RBP8.94□□□□□ -0.98
COPS3-215ENST00000578317 SAMM50Q9Y512 469 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 NOP56O00567 594 aaKnown RBP8.93□□□□□ -0.98
COPS3-215ENST00000578317 DYNC1LI2O43237 492 aaPredicted RBP8.93□□□□□ -0.98
COPS3-215ENST00000578317 ADCY6O43306 1168 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 MSCO60682 206 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 KPNA6O60684 536 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 LETM1O95202 739 aaPredicted RBP8.93□□□□□ -0.98
COPS3-215ENST00000578317 ELNP15502 786 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 TCF7P36402 384 aaPredicted RBP8.93□□□□□ -0.98
COPS3-215ENST00000578317 SCNN1AP37088 669 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 STAT6P42226 847 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 STAT5BP51692 787 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 GJA9P57773 515 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 AMPD3Q01432 767 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 CTTNQ14247 550 aaKnown RBP8.93□□□□□ -0.98
COPS3-215ENST00000578317 SWSAP1Q6NVH7 229 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 CNNM4Q6P4Q7 775 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 RBM43Q6ZSC3 357 aaKnown RBP8.93□□□□□ -0.98
COPS3-215ENST00000578317 TPH2Q8IWU9 490 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 CEP57L1Q8IYX8 460 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 SYT2Q8N9I0 419 aaPredicted RBP8.93□□□□□ -0.98
COPS3-215ENST00000578317 RASSF8Q8NHQ8 419 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 LRRC15Q8TF66 581 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 AFG1LQ8WV93 481 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 COPS5Q92905 334 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 DHX58Q96C10 678 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 PAGE5Q96GU1 130 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 PRIMPOLQ96LW4 560 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 PCYT2Q99447 389 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 LXNQ9BS40 222 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 PRKD2Q9BZL6 878 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 LRRC27Q9C0I9 530 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 TNMDQ9H2S6 317 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 CLSTN2Q9H4D0 955 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 SMARCAD1Q9H4L7 1026 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 ANKEF1Q9NU02 776 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 WRAP73Q9P2S5 460 aaPredicted RBP8.93□□□□□ -0.98
COPS3-215ENST00000578317 GABBR1Q9UBS5 961 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 SERTAD1Q9UHV2 236 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 DBR1Q9UK59 544 aaKnown RBP8.93□□□□□ -0.98
COPS3-215ENST00000578317 TELO2Q9Y4R8 837 aa8.93□□□□□ -0.98
COPS3-215ENST00000578317 RBBP6Q7Z6E9 1792 aaKnown RBP8.93□□□□□ -0.98
COPS3-215ENST00000578317 EMSYQ7Z589 1322 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 LCTP09848 1927 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 ZNF862O60290 1169 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 STBD1O95210 358 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 EYA4O95677 639 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 VARSP26640 1264 aaKnown RBP8.92□□□□□ -0.98
COPS3-215ENST00000578317 CPT1AP50416 773 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 CYP4A11Q02928 519 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 DGKDQ16760 1214 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 BRDTQ58F21 947 aaPredicted RBP8.92□□□□□ -0.98
COPS3-215ENST00000578317 XKR3Q5GH77 459 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 CCDC183Q5T5S1 534 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 FAM160B1Q5W0V3 765 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 SV2BQ7L1I2 683 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 OTUD6AQ7L8S5 288 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 KCNK18Q7Z418 384 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 CCDC60Q8IWA6 550 aaPredicted RBP8.92□□□□□ -0.98
COPS3-215ENST00000578317 OR6J1Q8NGC5 347 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 SPATA20Q8TB22 786 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 LARP4BQ92615 738 aaKnown RBP8.92□□□□□ -0.98
COPS3-215ENST00000578317 RAD54LQ92698 747 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 ANP32EQ9BTT0 268 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 NIFKQ9BYG3 293 aaKnown RBP8.92□□□□□ -0.98
COPS3-215ENST00000578317 AP5M1Q9H0R1 490 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 UPF3AQ9H1J1 476 aaKnown RBP8.92□□□□□ -0.98
COPS3-215ENST00000578317 AZI2Q9H6S1 392 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 ZNF302Q9NR11 478 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 KCND2Q9NZV8 630 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 TMEM63CQ9P1W3 806 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 EGFL7Q9UHF1 273 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 PPME1Q9Y570 386 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 PTCH2Q9Y6C5 1203 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 IGSF9BQ9UPX0 1349 aa8.92□□□□□ -0.98
COPS3-215ENST00000578317 SIAH2O43255 324 aa8.91□□□□□ -0.98
COPS3-215ENST00000578317 MYCP01106 439 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms