RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 STK24Q9Y6E0 443 aa24.76■■□□□ 1.55
SMARCD2-206ENST00000577990 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.75■■□□□ 1.55
SMARCD2-206ENST00000577990 XRCC6P12956 609 aaKnown RBP eCLIP24.75■■□□□ 1.55
SMARCD2-206ENST00000577990 ADGRE1Q14246 886 aa24.75■■□□□ 1.55
SMARCD2-206ENST00000577990 EMC2Q15006 297 aa24.75■■□□□ 1.55
SMARCD2-206ENST00000577990 ODR4Q5SWX8 454 aa24.75■■□□□ 1.55
SMARCD2-206ENST00000577990 PIGOQ8TEQ8 1089 aa24.75■■□□□ 1.55
SMARCD2-206ENST00000577990 SCLT1Q96NL6 688 aa24.75■■□□□ 1.55
SMARCD2-206ENST00000577990 FTHL17Q9BXU8 183 aa24.75■■□□□ 1.55
SMARCD2-206ENST00000577990 ERVK-5Q9HDB9 667 aa24.75■■□□□ 1.55
SMARCD2-206ENST00000577990 GAS2O43903 313 aaKnown RBP24.74■■□□□ 1.55
SMARCD2-206ENST00000577990 GJB5O95377 273 aa24.74■■□□□ 1.55
SMARCD2-206ENST00000577990 BMP15O95972 392 aa24.74■■□□□ 1.55
SMARCD2-206ENST00000577990 CA3P07451 260 aa24.74■■□□□ 1.55
SMARCD2-206ENST00000577990 MUTP22033 750 aa24.74■■□□□ 1.55
SMARCD2-206ENST00000577990 CCT6AP40227 531 aaKnown RBP24.74■■□□□ 1.55
SMARCD2-206ENST00000577990 RARRES1P49788 294 aa24.74■■□□□ 1.55
SMARCD2-206ENST00000577990 CDC42EP1Q00587 391 aa24.74■■□□□ 1.55
SMARCD2-206ENST00000577990 NFX1Q12986 1120 aaKnown RBP24.74■■□□□ 1.55
SMARCD2-206ENST00000577990 POTEGQ6S5H5 508 aa24.74■■□□□ 1.55
SMARCD2-206ENST00000577990 NLRP7Q8WX94 980 aa24.74■■□□□ 1.55
SMARCD2-206ENST00000577990 PPM1EQ8WY54 764 aa24.74■■□□□ 1.55
SMARCD2-206ENST00000577990 ZNF668Q96K58 619 aaPredicted RBP24.74■■□□□ 1.55
SMARCD2-206ENST00000577990 NACC1Q96RE7 527 aa24.74■■□□□ 1.55
SMARCD2-206ENST00000577990 ZBED2Q9BTP6 218 aa24.74■■□□□ 1.55
SMARCD2-206ENST00000577990 BMP2KQ9NSY1 1161 aaPredicted RBP24.74■■□□□ 1.55
SMARCD2-206ENST00000577990 A0A087WWV3 80 aa24.73■■□□□ 1.55
SMARCD2-206ENST00000577990 TLL1O43897 1013 aa24.73■■□□□ 1.55
SMARCD2-206ENST00000577990 ARL6IP4Q66PJ3 421 aaKnown RBP24.73■■□□□ 1.55
SMARCD2-206ENST00000577990 FAM228AQ86W67 206 aa24.73■■□□□ 1.55
SMARCD2-206ENST00000577990 RHPN2Q8IUC4 686 aa24.73■■□□□ 1.55
SMARCD2-206ENST00000577990 SNX29Q8TEQ0 813 aa24.73■■□□□ 1.55
SMARCD2-206ENST00000577990 TCP11Q8WWU5 503 aa24.73■■□□□ 1.55
SMARCD2-206ENST00000577990 LINC01599Q8WXQ3 324 aa24.73■■□□□ 1.55
SMARCD2-206ENST00000577990 MTRQ99707 1265 aa24.73■■□□□ 1.55
SMARCD2-206ENST00000577990 ST3GAL5Q9UNP4 418 aa24.73■■□□□ 1.55
SMARCD2-206ENST00000577990 SPTBN5Q9NRC6 3674 aaKnown RBP24.72■■□□□ 1.55
SMARCD2-206ENST00000577990 ENPP3O14638 875 aa24.72■■□□□ 1.55
SMARCD2-206ENST00000577990 GPR182O15218 404 aa24.72■■□□□ 1.55
SMARCD2-206ENST00000577990 DGAT1O75907 488 aa24.72■■□□□ 1.55
SMARCD2-206ENST00000577990 ARHGEF15O94989 841 aa24.72■■□□□ 1.55
SMARCD2-206ENST00000577990 IGFBP4P22692 258 aa24.72■■□□□ 1.55
SMARCD2-206ENST00000577990 EIF4BP23588 611 aaKnown RBP24.72■■□□□ 1.55
SMARCD2-206ENST00000577990 KRT79Q5XKE5 535 aa24.72■■□□□ 1.55
SMARCD2-206ENST00000577990 FAM117BQ6P1L5 589 aa24.72■■□□□ 1.55
SMARCD2-206ENST00000577990 FAM43BQ6ZT52 329 aaPredicted RBP24.72■■□□□ 1.55
SMARCD2-206ENST00000577990 PSPC1Q8WXF1 523 aaKnown RBP24.72■■□□□ 1.55
SMARCD2-206ENST00000577990 TMEM143Q96AN5 459 aa24.72■■□□□ 1.55
SMARCD2-206ENST00000577990 TMX1Q9H3N1 280 aa24.72■■□□□ 1.55
SMARCD2-206ENST00000577990 CERS4Q9HA82 394 aa24.72■■□□□ 1.55
SMARCD2-206ENST00000577990 ATP6V0A4Q9HBG4 840 aa24.72■■□□□ 1.55
SMARCD2-206ENST00000577990 DBR1Q9UK59 544 aaKnown RBP24.72■■□□□ 1.55
SMARCD2-206ENST00000577990 TTC28Q96AY4 2481 aa24.72■■□□□ 1.55
SMARCD2-206ENST00000577990 PRRC2BQ5JSZ5 2229 aaKnown RBP24.71■■□□□ 1.55
SMARCD2-206ENST00000577990 VWA3AA6NCI4 1184 aa24.71■■□□□ 1.55
SMARCD2-206ENST00000577990 PP2D1A8MPX8 630 aa24.71■■□□□ 1.55
SMARCD2-206ENST00000577990 DARSP14868 501 aaKnown RBP24.71■■□□□ 1.55
SMARCD2-206ENST00000577990 SF3A1Q15459 793 aaKnown RBP24.71■■□□□ 1.55
SMARCD2-206ENST00000577990 ZNF410Q86VK4 478 aa24.71■■□□□ 1.55
SMARCD2-206ENST00000577990 TOP1MTQ969P6 601 aa24.71■■□□□ 1.55
SMARCD2-206ENST00000577990 RAD9AQ99638 391 aa24.71■■□□□ 1.55
SMARCD2-206ENST00000577990 COL25A1Q9BXS0 654 aaPredicted RBP24.71■■□□□ 1.55
SMARCD2-206ENST00000577990 GCOM2Q9BZD3 368 aaPredicted RBP24.71■■□□□ 1.55
SMARCD2-206ENST00000577990 ZSCAN16Q9H4T2 348 aaPredicted RBP24.71■■□□□ 1.55
SMARCD2-206ENST00000577990 XPNPEP1Q9NQW7 623 aa24.71■■□□□ 1.55
SMARCD2-206ENST00000577990 PRDM6Q9NQX0 595 aa24.71■■□□□ 1.55
SMARCD2-206ENST00000577990 COL4A3BPQ9Y5P4 624 aa24.71■■□□□ 1.55
SMARCD2-206ENST00000577990 COL4A4P53420 1690 aaPredicted RBP24.7■■□□□ 1.54
SMARCD2-206ENST00000577990 CCDC85BQ15834 202 aaPredicted RBP24.7■■□□□ 1.54
SMARCD2-206ENST00000577990 ECM1Q16610 540 aa24.7■■□□□ 1.54
SMARCD2-206ENST00000577990 SPRYD3Q8NCJ5 442 aa24.7■■□□□ 1.54
SMARCD2-206ENST00000577990 TSPYL2Q9H2G4 693 aaPredicted RBP24.7■■□□□ 1.54
SMARCD2-206ENST00000577990 TTC3P53804 2025 aa24.69■■□□□ 1.54
SMARCD2-206ENST00000577990 A0A087WZ62 844 aa24.69■■□□□ 1.54
SMARCD2-206ENST00000577990 USO1O60763 962 aaKnown RBP24.69■■□□□ 1.54
SMARCD2-206ENST00000577990 UPP2O95045 317 aa24.69■■□□□ 1.54
SMARCD2-206ENST00000577990 PDIA4P13667 645 aaKnown RBP24.69■■□□□ 1.54
SMARCD2-206ENST00000577990 FAM173BQ6P4H8 233 aa24.69■■□□□ 1.54
SMARCD2-206ENST00000577990 RTN4RL1Q86UN2 441 aaPredicted RBP24.69■■□□□ 1.54
SMARCD2-206ENST00000577990 KSR1Q8IVT5 923 aa24.69■■□□□ 1.54
SMARCD2-206ENST00000577990 PRPF31Q8WWY3 499 aaKnown RBP24.69■■□□□ 1.54
SMARCD2-206ENST00000577990 NLRP4Q96MN2 994 aa24.69■■□□□ 1.54
SMARCD2-206ENST00000577990 FDXACB1Q9BRP7 624 aaPredicted RBP24.69■■□□□ 1.54
SMARCD2-206ENST00000577990 KIAA1024Q9UPX6 916 aa24.69■■□□□ 1.54
SMARCD2-206ENST00000577990 ARHGEF35A5YM69 484 aa24.68■■□□□ 1.54
SMARCD2-206ENST00000577990 RFXAPO00287 272 aa24.68■■□□□ 1.54
SMARCD2-206ENST00000577990 CDC25AP30304 524 aa24.68■■□□□ 1.54
SMARCD2-206ENST00000577990 LAMTOR4Q0VGL1 99 aa24.68■■□□□ 1.54
SMARCD2-206ENST00000577990 SPRED2Q7Z698 418 aa24.68■■□□□ 1.54
SMARCD2-206ENST00000577990 MMTAG2Q9BU76 263 aaKnown RBP24.68■■□□□ 1.54
SMARCD2-206ENST00000577990 DDX19AQ9NUU7 478 aaKnown RBP24.68■■□□□ 1.54
SMARCD2-206ENST00000577990 INSL6Q9Y581 213 aa24.68■■□□□ 1.54
SMARCD2-206ENST00000577990 CLIC4Q9Y696 253 aa24.68■■□□□ 1.54
SMARCD2-206ENST00000577990 DENND3A2RUS2 1198 aa24.67■■□□□ 1.54
SMARCD2-206ENST00000577990 LCHNA4D1U4 455 aa24.67■■□□□ 1.54
SMARCD2-206ENST00000577990 EPOPA6NHQ4 379 aa24.67■■□□□ 1.54
SMARCD2-206ENST00000577990 ASAP2O43150 1006 aa24.67■■□□□ 1.54
SMARCD2-206ENST00000577990 MGEA5O60502 916 aa24.67■■□□□ 1.54
SMARCD2-206ENST00000577990 HTRA4P83105 476 aaPredicted RBP24.67■■□□□ 1.54
SMARCD2-206ENST00000577990 TAP1Q03518 808 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms