RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 BMP15O95972 392 aa21.55■■□□□ 1.04
SS18-208ENST00000577751 NFX1Q12986 1120 aaKnown RBP21.55■■□□□ 1.04
SS18-208ENST00000577751 EMC2Q15006 297 aa21.55■■□□□ 1.04
SS18-208ENST00000577751 POTEGQ6S5H5 508 aa21.55■■□□□ 1.04
SS18-208ENST00000577751 ZNF410Q86VK4 478 aa21.55■■□□□ 1.04
SS18-208ENST00000577751 TCP11Q8WWU5 503 aa21.55■■□□□ 1.04
SS18-208ENST00000577751 RAD9AQ99638 391 aa21.55■■□□□ 1.04
SS18-208ENST00000577751 SLC28A3Q9HAS3 691 aa21.55■■□□□ 1.04
SS18-208ENST00000577751 XPNPEP1Q9NQW7 623 aa21.55■■□□□ 1.04
SS18-208ENST00000577751 TLL1O43897 1013 aa21.54■■□□□ 1.04
SS18-208ENST00000577751 PDIA4P13667 645 aaKnown RBP21.54■■□□□ 1.04
SS18-208ENST00000577751 DARSP14868 501 aaKnown RBP21.54■■□□□ 1.04
SS18-208ENST00000577751 CCT6AP40227 531 aaKnown RBP21.54■■□□□ 1.04
SS18-208ENST00000577751 HTRA4P83105 476 aaPredicted RBP21.54■■□□□ 1.04
SS18-208ENST00000577751 SF3A1Q15459 793 aaKnown RBP21.54■■□□□ 1.04
SS18-208ENST00000577751 RHPN2Q8IUC4 686 aa21.54■■□□□ 1.04
SS18-208ENST00000577751 KSR1Q8IVT5 923 aa21.54■■□□□ 1.04
SS18-208ENST00000577751 CRIPAKQ8N1N5 446 aa21.54■■□□□ 1.04
SS18-208ENST00000577751 TMEM143Q96AN5 459 aa21.54■■□□□ 1.04
SS18-208ENST00000577751 ZNF668Q96K58 619 aaPredicted RBP21.54■■□□□ 1.04
SS18-208ENST00000577751 FAM161BQ96MY7 647 aa21.54■■□□□ 1.04
SS18-208ENST00000577751 MTRQ99707 1265 aa21.54■■□□□ 1.04
SS18-208ENST00000577751 ZBED2Q9BTP6 218 aa21.54■■□□□ 1.04
SS18-208ENST00000577751 MMTAG2Q9BU76 263 aaKnown RBP21.54■■□□□ 1.04
SS18-208ENST00000577751 TSPYL2Q9H2G4 693 aaPredicted RBP21.54■■□□□ 1.04
SS18-208ENST00000577751 ZSCAN16Q9H4T2 348 aaPredicted RBP21.54■■□□□ 1.04
SS18-208ENST00000577751 A0A087WZ62 844 aa21.53■■□□□ 1.04
SS18-208ENST00000577751 PP2D1A8MPX8 630 aa21.53■■□□□ 1.04
SS18-208ENST00000577751 CA3P07451 260 aa21.53■■□□□ 1.04
SS18-208ENST00000577751 HSP90AA1P07900 732 aaKnown RBP21.53■■□□□ 1.04
SS18-208ENST00000577751 CDC25AP30304 524 aa21.53■■□□□ 1.04
SS18-208ENST00000577751 SNX29Q8TEQ0 813 aa21.53■■□□□ 1.04
SS18-208ENST00000577751 PRPF31Q8WWY3 499 aaKnown RBP21.53■■□□□ 1.04
SS18-208ENST00000577751 NLRP7Q8WX94 980 aa21.53■■□□□ 1.04
SS18-208ENST00000577751 PSPC1Q8WXF1 523 aaKnown RBP21.53■■□□□ 1.04
SS18-208ENST00000577751 GUCD1Q96NT3 240 aa21.53■■□□□ 1.04
SS18-208ENST00000577751 FDXACB1Q9BRP7 624 aaPredicted RBP21.53■■□□□ 1.04
SS18-208ENST00000577751 GCOM2Q9BZD3 368 aaPredicted RBP21.53■■□□□ 1.04
SS18-208ENST00000577751 BMP2KQ9NSY1 1161 aaPredicted RBP21.53■■□□□ 1.04
SS18-208ENST00000577751 COL4A3BPQ9Y5P4 624 aa21.53■■□□□ 1.04
SS18-208ENST00000577751 VWA3AA6NCI4 1184 aa21.52■■□□□ 1.04
SS18-208ENST00000577751 ASAP2O43150 1006 aa21.52■■□□□ 1.04
SS18-208ENST00000577751 MGEA5O60502 916 aa21.52■■□□□ 1.04
SS18-208ENST00000577751 GRIN2CQ14957 1233 aa21.52■■□□□ 1.04
SS18-208ENST00000577751 PTPAQ15257 358 aa21.52■■□□□ 1.04
SS18-208ENST00000577751 KRT79Q5XKE5 535 aa21.52■■□□□ 1.04
SS18-208ENST00000577751 FAM117BQ6P1L5 589 aa21.52■■□□□ 1.04
SS18-208ENST00000577751 FAM173BQ6P4H8 233 aa21.52■■□□□ 1.04
SS18-208ENST00000577751 ATP6V0A4Q9HBG4 840 aa21.52■■□□□ 1.04
SS18-208ENST00000577751 IFT122Q9HBG6 1241 aa21.52■■□□□ 1.04
SS18-208ENST00000577751 RGS18Q9NS28 235 aa21.52■■□□□ 1.04
SS18-208ENST00000577751 KIAA1024Q9UPX6 916 aa21.52■■□□□ 1.04
SS18-208ENST00000577751 INSL6Q9Y581 213 aa21.52■■□□□ 1.04
SS18-208ENST00000577751 CLIC4Q9Y696 253 aa21.52■■□□□ 1.04
SS18-208ENST00000577751 MYH15Q9Y2K3 1946 aa21.51■■□□□ 1.03
SS18-208ENST00000577751 LCHNA4D1U4 455 aa21.51■■□□□ 1.03
SS18-208ENST00000577751 ARHGEF15O94989 841 aa21.51■■□□□ 1.03
SS18-208ENST00000577751 UPP2O95045 317 aa21.51■■□□□ 1.03
SS18-208ENST00000577751 LAMTOR4Q0VGL1 99 aa21.51■■□□□ 1.03
SS18-208ENST00000577751 DSC3Q14574 896 aa21.51■■□□□ 1.03
SS18-208ENST00000577751 HYIQ5T013 277 aa21.51■■□□□ 1.03
SS18-208ENST00000577751 PPP2R2DQ66LE6 453 aa21.51■■□□□ 1.03
SS18-208ENST00000577751 SP7Q8TDD2 431 aaPredicted RBP21.51■■□□□ 1.03
SS18-208ENST00000577751 CCDC43Q96MW1 224 aaKnown RBP21.51■■□□□ 1.03
SS18-208ENST00000577751 SCLT1Q96NL6 688 aa21.51■■□□□ 1.03
SS18-208ENST00000577751 INO80BQ9C086 356 aaPredicted RBP21.51■■□□□ 1.03
SS18-208ENST00000577751 COL4A6Q14031 1691 aa21.5■■□□□ 1.03
SS18-208ENST00000577751 ARL2P36404 184 aa21.5■■□□□ 1.03
SS18-208ENST00000577751 TAP1Q03518 808 aa21.5■■□□□ 1.03
SS18-208ENST00000577751 MXD4Q14582 209 aaPredicted RBP21.5■■□□□ 1.03
SS18-208ENST00000577751 AK8Q96MA6 479 aa21.5■■□□□ 1.03
SS18-208ENST00000577751 NLRP4Q96MN2 994 aa21.5■■□□□ 1.03
SS18-208ENST00000577751 CDX2Q99626 313 aaPredicted RBP21.5■■□□□ 1.03
SS18-208ENST00000577751 ADAM2Q99965 735 aa21.5■■□□□ 1.03
SS18-208ENST00000577751 DDX19AQ9NUU7 478 aaKnown RBP21.5■■□□□ 1.03
SS18-208ENST00000577751 C9IYK1 514 aa21.49■■□□□ 1.03
SS18-208ENST00000577751 USO1O60763 962 aaKnown RBP21.49■■□□□ 1.03
SS18-208ENST00000577751 CSDE1O75534 798 aaKnown RBP21.49■■□□□ 1.03
SS18-208ENST00000577751 FAM189BP81408 668 aa21.49■■□□□ 1.03
SS18-208ENST00000577751 POU5F1BQ06416 359 aa21.49■■□□□ 1.03
SS18-208ENST00000577751 KCTD17Q8N5Z5 321 aa21.49■■□□□ 1.03
SS18-208ENST00000577751 MCPH1Q8NEM0 835 aa21.49■■□□□ 1.03
SS18-208ENST00000577751 C1orf112Q9NSG2 853 aa21.49■■□□□ 1.03
SS18-208ENST00000577751 MORC2Q9Y6X9 1032 aaPredicted RBP21.49■■□□□ 1.03
SS18-208ENST00000577751 CHD9Q3L8U1 2897 aa21.49■■□□□ 1.03
SS18-208ENST00000577751 ARHGEF35A5YM69 484 aa21.48■■□□□ 1.03
SS18-208ENST00000577751 DGKIO75912 1065 aa21.48■■□□□ 1.03
SS18-208ENST00000577751 SRGAP2CP0DJJ0 459 aa21.48■■□□□ 1.03
SS18-208ENST00000577751 CYP11B2P19099 503 aa21.48■■□□□ 1.03
SS18-208ENST00000577751 FGFR4P22455 802 aa21.48■■□□□ 1.03
SS18-208ENST00000577751 SARSP49591 514 aaKnown RBP21.48■■□□□ 1.03
SS18-208ENST00000577751 GRIN1Q05586 938 aa21.48■■□□□ 1.03
SS18-208ENST00000577751 PADI6Q6TGC4 694 aa21.48■■□□□ 1.03
SS18-208ENST00000577751 SLC24A5Q71RS6 500 aa21.48■■□□□ 1.03
SS18-208ENST00000577751 SRGAP1Q7Z6B7 1085 aa21.48■■□□□ 1.03
SS18-208ENST00000577751 IFNLR1Q8IU57 520 aaPredicted RBP21.48■■□□□ 1.03
SS18-208ENST00000577751 NPAS4Q8IUM7 802 aa21.48■■□□□ 1.03
SS18-208ENST00000577751 RNF149Q8NC42 400 aa21.48■■□□□ 1.03
SS18-208ENST00000577751 SPRYD3Q8NCJ5 442 aa21.48■■□□□ 1.03
SS18-208ENST00000577751 ZNF689Q96CS4 500 aaPredicted RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms