RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 ARL2P36404 184 aa22.25■■□□□ 1.15
SUPT4H1-202ENST00000577396 GPC3P51654 580 aa22.25■■□□□ 1.15
SUPT4H1-202ENST00000577396 SLC12A3P55017 1021 aa22.25■■□□□ 1.15
SUPT4H1-202ENST00000577396 NLRP11P59045 1033 aaKnown RBP22.25■■□□□ 1.15
SUPT4H1-202ENST00000577396 LPIN1Q14693 890 aa22.25■■□□□ 1.15
SUPT4H1-202ENST00000577396 ZNF365Q70YC5 407 aa22.25■■□□□ 1.15
SUPT4H1-202ENST00000577396 PRPF31Q8WWY3 499 aaKnown RBP22.25■■□□□ 1.15
SUPT4H1-202ENST00000577396 CCDC43Q96MW1 224 aaKnown RBP22.25■■□□□ 1.15
SUPT4H1-202ENST00000577396 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.25■■□□□ 1.151e-6■■□□□ 12.2
SUPT4H1-202ENST00000577396 UBE2OQ9C0C9 1292 aaKnown RBP22.25■■□□□ 1.15
SUPT4H1-202ENST00000577396 SQORQ9Y6N5 450 aa22.25■■□□□ 1.15
SUPT4H1-202ENST00000577396 A0A087X0B3 334 aa22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 CRYBB1P53674 252 aaPredicted RBP22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 CDC42EP1Q00587 391 aa22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 TCTN1Q2MV58 587 aa22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 NAALADL2Q58DX5 795 aa22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 PLEKHG4Q58EX7 1191 aa22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 RINT1Q6NUQ1 792 aa22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 C1orf186Q6ZWK4 172 aa22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 KSR1Q8IVT5 923 aa22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 TMEM40Q8WWA1 233 aa22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 TCP11Q8WWU5 503 aa22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 AGO3Q9H9G7 860 aaKnown RBP22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 M0QZ92 97 aa22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 PLA2G4BP0C869 781 aa22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 C9orf50Q5SZB4 431 aa22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 MCPH1Q8NEM0 835 aa22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 PSPC1Q8WXF1 523 aaKnown RBP22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 PPP1R16BQ96T49 567 aa22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 PANK2Q9BZ23 570 aa22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 GDPD2Q9HCC8 539 aa22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 CCDC39Q9UFE4 941 aa22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 COLQQ9Y215 455 aaPredicted RBP22.24■■□□□ 1.15
SUPT4H1-202ENST00000577396 FGBP02675 491 aa22.23■■□□□ 1.15
SUPT4H1-202ENST00000577396 GHRP10912 638 aa22.23■■□□□ 1.15
SUPT4H1-202ENST00000577396 TXLNAP40222 546 aa22.23■■□□□ 1.15
SUPT4H1-202ENST00000577396 LAMTOR4Q0VGL1 99 aa22.23■■□□□ 1.15
SUPT4H1-202ENST00000577396 SHHQ15465 462 aa22.23■■□□□ 1.15
SUPT4H1-202ENST00000577396 RESP18Q5W5W9 173 aa22.23■■□□□ 1.15
SUPT4H1-202ENST00000577396 ADALQ6DHV7 355 aa22.23■■□□□ 1.15
SUPT4H1-202ENST00000577396 RHPN2Q8IUC4 686 aa22.23■■□□□ 1.15
SUPT4H1-202ENST00000577396 USP38Q8NB14 1042 aa22.23■■□□□ 1.15
SUPT4H1-202ENST00000577396 DBF4BQ8NFT6 615 aa22.23■■□□□ 1.15
SUPT4H1-202ENST00000577396 RAD54LQ92698 747 aa22.23■■□□□ 1.15
SUPT4H1-202ENST00000577396 ZNF668Q96K58 619 aaPredicted RBP22.23■■□□□ 1.15
SUPT4H1-202ENST00000577396 OSMRQ99650 979 aa22.23■■□□□ 1.15
SUPT4H1-202ENST00000577396 RUSC1Q9BVN2 902 aa22.23■■□□□ 1.15
SUPT4H1-202ENST00000577396 GPRC5CQ9NQ84 441 aa22.23■■□□□ 1.15
SUPT4H1-202ENST00000577396 GINS2Q9Y248 185 aa22.23■■□□□ 1.15
SUPT4H1-202ENST00000577396 COL4A3BPQ9Y5P4 624 aa22.23■■□□□ 1.15
SUPT4H1-202ENST00000577396 SIP14410 1827 aa22.23■■□□□ 1.15
SUPT4H1-202ENST00000577396 ASAP2O43150 1006 aa22.22■■□□□ 1.15
SUPT4H1-202ENST00000577396 ARSHQ5FYA8 562 aa22.22■■□□□ 1.15
SUPT4H1-202ENST00000577396 RRAGBQ5VZM2 374 aa22.22■■□□□ 1.15
SUPT4H1-202ENST00000577396 MAEAQ7L5Y9 396 aa22.22■■□□□ 1.15
SUPT4H1-202ENST00000577396 IFT122Q9HBG6 1241 aa22.22■■□□□ 1.15
SUPT4H1-202ENST00000577396 A0A087WZ62 844 aa22.21■■□□□ 1.15
SUPT4H1-202ENST00000577396 MXD4Q14582 209 aaPredicted RBP22.21■■□□□ 1.15
SUPT4H1-202ENST00000577396 RASIP1Q5U651 963 aa22.21■■□□□ 1.15
SUPT4H1-202ENST00000577396 PSRC1Q6PGN9 363 aaPredicted RBP22.21■■□□□ 1.15
SUPT4H1-202ENST00000577396 TSHZ1Q6ZSZ6 1077 aa22.21■■□□□ 1.15
SUPT4H1-202ENST00000577396 RASSF8Q8NHQ8 419 aa22.21■■□□□ 1.15
SUPT4H1-202ENST00000577396 ASAP3Q8TDY4 903 aa22.21■■□□□ 1.15
SUPT4H1-202ENST00000577396 FDXACB1Q9BRP7 624 aaPredicted RBP22.21■■□□□ 1.15
SUPT4H1-202ENST00000577396 POLD4Q9HCU8 107 aa22.21■■□□□ 1.15
SUPT4H1-202ENST00000577396 NOC2LQ9Y3T9 749 aaKnown RBP22.21■■□□□ 1.15
SUPT4H1-202ENST00000577396 GLRA2P23416 452 aa22.2■■□□□ 1.15
SUPT4H1-202ENST00000577396 EIF4BP23588 611 aaKnown RBP22.2■■□□□ 1.15
SUPT4H1-202ENST00000577396 CMA1P23946 247 aa22.2■■□□□ 1.15
SUPT4H1-202ENST00000577396 MCM6Q14566 821 aa22.2■■□□□ 1.15
SUPT4H1-202ENST00000577396 E2F4Q16254 413 aa22.2■■□□□ 1.15
SUPT4H1-202ENST00000577396 CNKSR3Q6P9H4 555 aa22.2■■□□□ 1.15
SUPT4H1-202ENST00000577396 CCDC73Q6ZRK6 1079 aa22.2■■□□□ 1.15
SUPT4H1-202ENST00000577396 OTOP2Q7RTS6 562 aa22.2■■□□□ 1.15
SUPT4H1-202ENST00000577396 ZNF410Q86VK4 478 aa22.2■■□□□ 1.15
SUPT4H1-202ENST00000577396 DAW1Q8N136 415 aa22.2■■□□□ 1.15
SUPT4H1-202ENST00000577396 HERVK_113Q902F9 699 aa22.2■■□□□ 1.15
SUPT4H1-202ENST00000577396 IFIH1Q9BYX4 1025 aaKnown RBP22.2■■□□□ 1.15
SUPT4H1-202ENST00000577396 STK17AQ9UEE5 414 aa22.2■■□□□ 1.15
SUPT4H1-202ENST00000577396 DARSP14868 501 aaKnown RBP22.2■■□□□ 1.14
SUPT4H1-202ENST00000577396 GUCY2CP25092 1073 aa22.2■■□□□ 1.14
SUPT4H1-202ENST00000577396 CD52P31358 61 aa22.2■■□□□ 1.14
SUPT4H1-202ENST00000577396 POU5F1BQ06416 359 aa22.2■■□□□ 1.14
SUPT4H1-202ENST00000577396 FAM102BQ5T8I3 360 aa22.2■■□□□ 1.14
SUPT4H1-202ENST00000577396 PDILTQ8N807 584 aa22.2■■□□□ 1.14
SUPT4H1-202ENST00000577396 NLRP7Q8WX94 980 aa22.2■■□□□ 1.14
SUPT4H1-202ENST00000577396 LARP4BQ92615 738 aaKnown RBP22.2■■□□□ 1.14
SUPT4H1-202ENST00000577396 POLR3FQ9H1D9 316 aaPredicted RBP22.2■■□□□ 1.14
SUPT4H1-202ENST00000577396 KCND2Q9NZV8 630 aa22.2■■□□□ 1.14
SUPT4H1-202ENST00000577396 PADI3Q9ULW8 664 aa22.2■■□□□ 1.14
SUPT4H1-202ENST00000577396 LOXHD1Q8IVV2 1947 aa22.2■■□□□ 1.14
SUPT4H1-202ENST00000577396 SSBP05455 408 aaKnown RBP eCLIP22.19■■□□□ 1.14
SUPT4H1-202ENST00000577396 SRGAP2CP0DJJ0 459 aa22.19■■□□□ 1.14
SUPT4H1-202ENST00000577396 MAPK7Q13164 816 aa22.19■■□□□ 1.14
SUPT4H1-202ENST00000577396 TDHQ8IZJ6 230 aa22.19■■□□□ 1.14
SUPT4H1-202ENST00000577396 SEPT8Q92599 483 aa22.19■■□□□ 1.14
SUPT4H1-202ENST00000577396 NLRP4Q96MN2 994 aa22.19■■□□□ 1.14
SUPT4H1-202ENST00000577396 CXXC1Q9P0U4 656 aaPredicted RBP22.19■■□□□ 1.14
SUPT4H1-202ENST00000577396 RPS6KA5O75582 802 aa22.18■■□□□ 1.14
SUPT4H1-202ENST00000577396 CAPSQ13938 189 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms