RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-216ENST00000577001 CLK2P49760 499 aaKnown RBP16.09■□□□□ 0.17
PRPF8-216ENST00000577001 PLA2G4FQ68DD2 849 aa16.09■□□□□ 0.17
PRPF8-216ENST00000577001 CEP57Q86XR8 500 aa16.09■□□□□ 0.17
PRPF8-216ENST00000577001 ERMNQ8TAM6 284 aa16.09■□□□□ 0.17
PRPF8-216ENST00000577001 ALG3Q92685 438 aa16.09■□□□□ 0.17
PRPF8-216ENST00000577001 TBK1Q9UHD2 729 aa16.09■□□□□ 0.17
PRPF8-216ENST00000577001 POLRMTO00411 1230 aaKnown RBP16.08■□□□□ 0.17
PRPF8-216ENST00000577001 PEX10O60683 326 aa16.08■□□□□ 0.17
PRPF8-216ENST00000577001 HARSP12081 509 aaKnown RBP16.08■□□□□ 0.17
PRPF8-216ENST00000577001 RC3H1Q5TC82 1133 aaKnown RBP16.08■□□□□ 0.17
PRPF8-216ENST00000577001 IQCKQ8N0W5 287 aa16.08■□□□□ 0.17
PRPF8-216ENST00000577001 ZNF473Q8WTR7 871 aaKnown RBP16.08■□□□□ 0.17
PRPF8-216ENST00000577001 TRIM7Q9C029 511 aa16.08■□□□□ 0.17
PRPF8-216ENST00000577001 PGRMC1O00264 195 aaKnown RBP16.08■□□□□ 0.16
PRPF8-216ENST00000577001 OPLAHO14841 1288 aa16.08■□□□□ 0.16
PRPF8-216ENST00000577001 FLOT1O75955 427 aa16.08■□□□□ 0.16
PRPF8-216ENST00000577001 TUBBP07437 444 aa16.08■□□□□ 0.16
PRPF8-216ENST00000577001 DLATP10515 647 aaKnown RBP16.08■□□□□ 0.16
PRPF8-216ENST00000577001 SF3B2Q13435 895 aaKnown RBP16.08■□□□□ 0.16
PRPF8-216ENST00000577001 GRIPAP1Q4V328 841 aa16.08■□□□□ 0.16
PRPF8-216ENST00000577001 ARHGEF19Q8IW93 802 aa16.08■□□□□ 0.16
PRPF8-216ENST00000577001 LENG9Q96B70 501 aa16.08■□□□□ 0.16
PRPF8-216ENST00000577001 SCLT1Q96NL6 688 aa16.08■□□□□ 0.16
PRPF8-216ENST00000577001 MTFR1LQ9H019 292 aa16.08■□□□□ 0.16
PRPF8-216ENST00000577001 TAF1DQ9H5J8 278 aaPredicted RBP16.08■□□□□ 0.16
PRPF8-216ENST00000577001 KLHL11Q9NVR0 708 aa16.08■□□□□ 0.16
PRPF8-216ENST00000577001 TELO2Q9Y4R8 837 aa16.08■□□□□ 0.16
PRPF8-216ENST00000577001 ESYT2A0FGR8 921 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 CCDC169A6NNP5 214 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 GJB6O95452 261 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 PSMD2Q13200 908 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 EPHA7Q15375 998 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 ETNPPLQ8TBG4 499 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 HEMGNQ9BXL5 484 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.07■□□□□ 0.16
PRPF8-216ENST00000577001 COG5Q9UP83 839 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 GAKO14976 1311 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 GOLGA6L7A0A1B0GV03 622 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 CALUO43852 315 aaPredicted RBP16.07■□□□□ 0.16
PRPF8-216ENST00000577001 CAND2O75155 1236 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 SLITRK3O94933 977 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 EIF2AK2P19525 551 aaKnown RBP16.07■□□□□ 0.16
PRPF8-216ENST00000577001 IFI35P80217 286 aaPredicted RBP16.07■□□□□ 0.16
PRPF8-216ENST00000577001 CDK17Q00537 523 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 NLRP14Q86W24 1093 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 C1orf54Q8WWF1 131 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 ATG4AQ8WYN0 398 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 ATP6V1G3Q96LB4 118 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 JPH2Q9BR39 696 aaPredicted RBP16.07■□□□□ 0.16
PRPF8-216ENST00000577001 KCNMB3Q9NPA1 279 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 AMFRQ9UKV5 643 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 ATF5Q9Y2D1 282 aaPredicted RBP16.07■□□□□ 0.16
PRPF8-216ENST00000577001 ROBO3Q96MS0 1386 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 EMSYQ7Z589 1322 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 PJA2O43164 708 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 C21orf2O43822 256 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 CYP3A4P08684 503 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 SPIRE1Q08AE8 756 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 PHLDB3Q6NSJ2 640 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 CPLX4Q7Z7G2 160 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 ANKRD42Q8N9B4 389 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 IL31RAQ8NI17 732 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 TMEM39BQ9GZU3 492 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 SIX2Q9NPC8 291 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 GDF3Q9NR23 364 aa16.07■□□□□ 0.16
PRPF8-216ENST00000577001 KDM3AQ9Y4C1 1321 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 SLC16A4O15374 487 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 ECE2O60344 883 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 ACSL3O95573 720 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 SNHG28P0DPA3 235 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 GUCY2CP25092 1073 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 YY1P25490 414 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 ZNF844Q08AG5 666 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 DCAF12L1Q5VU92 463 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 PPM1EQ8WY54 764 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 ZNF577Q9BSK1 485 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 WDR11Q9BZH6 1224 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 LRRC27Q9C0I9 530 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 PDGFDQ9GZP0 370 aaPredicted RBP16.06■□□□□ 0.16
PRPF8-216ENST00000577001 TNRC6CQ9HCJ0 1690 aaKnown RBP16.06■□□□□ 0.16
PRPF8-216ENST00000577001 ANKRD63C9JTQ0 380 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 CYP26A1O43174 497 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 FTLP02792 175 aaPredicted RBP16.06■□□□□ 0.16
PRPF8-216ENST00000577001 CREB1P16220 341 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 TUBB4BP68371 445 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 PRKG1Q13976 671 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 ZKSCAN8Q15776 578 aaPredicted RBP16.06■□□□□ 0.16
PRPF8-216ENST00000577001 SEZ6Q53EL9 994 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 PASD1Q8IV76 773 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 FBXO25Q8TCJ0 367 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 MYH7BA7E2Y1 1941 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 SGPL1O95470 568 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 ALAS1P13196 640 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 USP11P51784 963 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 VPS72Q15906 364 aa16.06■□□□□ 0.16
PRPF8-216ENST00000577001 COL23A1Q86Y22 540 aaPredicted RBP16.06■□□□□ 0.16
PRPF8-216ENST00000577001 SYT2Q8N9I0 419 aaPredicted RBP16.06■□□□□ 0.16
PRPF8-216ENST00000577001 HIP1RO75146 1068 aa16.05■□□□□ 0.16
PRPF8-216ENST00000577001 PPP1R37O75864 691 aa16.05■□□□□ 0.16
PRPF8-216ENST00000577001 PSMC4P43686 418 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms