RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 CXorf67Q86X51 503 aaPredicted RBP7.41□□□□□ -1.22
NUP88-213ENST00000576862 CXorf38Q8TB03 319 aa7.41□□□□□ -1.22
NUP88-213ENST00000576862 RPGRQ92834 1020 aaKnown RBP7.41□□□□□ -1.22
NUP88-213ENST00000576862 RBM15Q96T37 977 aaKnown RBP eCLIP7.41□□□□□ -1.22
NUP88-213ENST00000576862 SSBP3Q9BWW4 388 aaPredicted RBP7.41□□□□□ -1.22
NUP88-213ENST00000576862 MEGF9Q9H1U4 602 aa7.41□□□□□ -1.22
NUP88-213ENST00000576862 MTG2Q9H4K7 406 aa7.41□□□□□ -1.22
NUP88-213ENST00000576862 VTA1Q9NP79 307 aa7.41□□□□□ -1.22
NUP88-213ENST00000576862 PPP4R1LQ9P1A2 415 aa7.41□□□□□ -1.22
NUP88-213ENST00000576862 PRSS38A1L453 326 aa7.4□□□□□ -1.22
NUP88-213ENST00000576862 KRTAP9-7A8MTY7 169 aa7.4□□□□□ -1.22
NUP88-213ENST00000576862 GPR39O43194 453 aa7.4□□□□□ -1.22
NUP88-213ENST00000576862 KDM1AO60341 852 aa7.4□□□□□ -1.22
NUP88-213ENST00000576862 OPHN1O60890 802 aa7.4□□□□□ -1.22
NUP88-213ENST00000576862 ULK1O75385 1050 aa7.4□□□□□ -1.22
NUP88-213ENST00000576862 MRE11P49959 708 aa7.4□□□□□ -1.22
NUP88-213ENST00000576862 SESN3P58005 492 aa7.4□□□□□ -1.22
NUP88-213ENST00000576862 SURF1Q15526 300 aa7.4□□□□□ -1.22
NUP88-213ENST00000576862 AGBL4Q5VU57 503 aa7.4□□□□□ -1.22
NUP88-213ENST00000576862 HDGFL2Q7Z4V5 671 aaPredicted RBP7.4□□□□□ -1.22
NUP88-213ENST00000576862 RTKN2Q8IZC4 609 aa7.4□□□□□ -1.22
NUP88-213ENST00000576862 NKD2Q969F2 451 aaPredicted RBP7.4□□□□□ -1.22
NUP88-213ENST00000576862 TOPORSQ9NS56 1045 aaPredicted RBP7.4□□□□□ -1.22
NUP88-213ENST00000576862 SAE1Q9UBE0 346 aaPredicted RBP7.4□□□□□ -1.22
NUP88-213ENST00000576862 NOC2LQ9Y3T9 749 aaKnown RBP7.4□□□□□ -1.22
NUP88-213ENST00000576862 PPP2R3BQ9Y5P8 575 aa7.4□□□□□ -1.22
NUP88-213ENST00000576862 MYPNQ86TC9 1320 aa7.39□□□□□ -1.23
NUP88-213ENST00000576862 A0A0A6YYK5 440 aaPredicted RBP7.39□□□□□ -1.23
NUP88-213ENST00000576862 MATN2O00339 956 aa7.39□□□□□ -1.23
NUP88-213ENST00000576862 PFKMP08237 780 aa7.39□□□□□ -1.23
NUP88-213ENST00000576862 CPEP16870 476 aa7.39□□□□□ -1.23
NUP88-213ENST00000576862 MANFP55145 182 aaKnown RBP7.39□□□□□ -1.23
NUP88-213ENST00000576862 TMPRSS15P98073 1019 aa7.39□□□□□ -1.23
NUP88-213ENST00000576862 AMPD3Q01432 767 aa7.39□□□□□ -1.23
NUP88-213ENST00000576862 NFYCQ13952 458 aa7.39□□□□□ -1.23
NUP88-213ENST00000576862 ZMAT1Q5H9K5 638 aa7.39□□□□□ -1.23
NUP88-213ENST00000576862 DDX42Q86XP3 938 aaKnown RBP eCLIP7.39□□□□□ -1.23
NUP88-213ENST00000576862 WDR66Q8TBY9 1149 aa7.39□□□□□ -1.23
NUP88-213ENST00000576862 RELTQ969Z4 430 aa7.39□□□□□ -1.23
NUP88-213ENST00000576862 SOX7Q9BT81 388 aa7.39□□□□□ -1.23
NUP88-213ENST00000576862 TMPRSS11EQ9UL52 423 aa7.39□□□□□ -1.23
NUP88-213ENST00000576862 FOXD2O60548 495 aaPredicted RBP7.38□□□□□ -1.23
NUP88-213ENST00000576862 RAB11FIP3O75154 756 aa7.38□□□□□ -1.23
NUP88-213ENST00000576862 PCDH8O95206 1070 aa7.38□□□□□ -1.23
NUP88-213ENST00000576862 MEOX1P50221 254 aa7.38□□□□□ -1.23
NUP88-213ENST00000576862 ADAM15Q13444 863 aa7.38□□□□□ -1.23
NUP88-213ENST00000576862 USP30Q70CQ3 517 aa7.38□□□□□ -1.23
NUP88-213ENST00000576862 LYSMD2Q8IV50 215 aa7.38□□□□□ -1.23
NUP88-213ENST00000576862 FAM177A1Q8N128 213 aaPredicted RBP7.38□□□□□ -1.23
NUP88-213ENST00000576862 CFHR4Q92496 578 aa7.38□□□□□ -1.23
NUP88-213ENST00000576862 DYDC2Q96IM9 177 aa7.38□□□□□ -1.23
NUP88-213ENST00000576862 BDH2Q9BUT1 245 aa7.38□□□□□ -1.23
NUP88-213ENST00000576862 ANO3Q9BYT9 981 aa7.38□□□□□ -1.23
NUP88-213ENST00000576862 OR10A2Q9H208 303 aa7.38□□□□□ -1.23
NUP88-213ENST00000576862 PRDM12Q9H4Q4 367 aa7.38□□□□□ -1.23
NUP88-213ENST00000576862 POLR3BQ9NW08 1133 aaPredicted RBP7.38□□□□□ -1.23
NUP88-213ENST00000576862 VWA7Q9Y334 891 aa7.38□□□□□ -1.23
NUP88-213ENST00000576862 CTDP1Q9Y5B0 961 aaPredicted RBP7.38□□□□□ -1.23
NUP88-213ENST00000576862 PHLDB1Q86UU1 1377 aa7.37□□□□□ -1.23
NUP88-213ENST00000576862 ZNF536O15090 1300 aa7.37□□□□□ -1.23
NUP88-213ENST00000576862 ARHGAP6O43182 974 aa7.37□□□□□ -1.23
NUP88-213ENST00000576862 PRKD3O94806 890 aa7.37□□□□□ -1.23
NUP88-213ENST00000576862 ITGB3P05106 788 aa7.37□□□□□ -1.23
NUP88-213ENST00000576862 CLEC2LP0C7M8 214 aa7.37□□□□□ -1.23
NUP88-213ENST00000576862 HGFACQ04756 655 aa7.37□□□□□ -1.23
NUP88-213ENST00000576862 SLFN13Q68D06 897 aa7.37□□□□□ -1.23
NUP88-213ENST00000576862 KLHDC10Q6PID8 442 aa7.37□□□□□ -1.23
NUP88-213ENST00000576862 LIMS2Q7Z4I7 341 aa7.37□□□□□ -1.23
NUP88-213ENST00000576862 CMIPQ8IY22 773 aa7.37□□□□□ -1.23
NUP88-213ENST00000576862 ATL2Q8NHH9 583 aa7.37□□□□□ -1.23
NUP88-213ENST00000576862 FERMT2Q96AC1 680 aa7.37□□□□□ -1.23
NUP88-213ENST00000576862 NEIL1Q96FI4 390 aaPredicted RBP7.37□□□□□ -1.23
NUP88-213ENST00000576862 NOL10Q9BSC4 688 aaKnown RBP7.37□□□□□ -1.23
NUP88-213ENST00000576862 SEC61A2Q9H9S3 476 aa7.37□□□□□ -1.23
NUP88-213ENST00000576862 DNAI1Q9UI46 699 aa7.37□□□□□ -1.23
NUP88-213ENST00000576862 ATP8A1Q9Y2Q0 1164 aa7.37□□□□□ -1.23
NUP88-213ENST00000576862 GPR42O15529 346 aa7.36□□□□□ -1.23
NUP88-213ENST00000576862 CELA3BP08861 270 aa7.36□□□□□ -1.23
NUP88-213ENST00000576862 RNF219Q5W0B1 726 aaPredicted RBP7.36□□□□□ -1.23
NUP88-213ENST00000576862 SPATS2Q86XZ4 545 aaKnown RBP7.36□□□□□ -1.23
NUP88-213ENST00000576862 SLC41A1Q8IVJ1 513 aa7.36□□□□□ -1.23
NUP88-213ENST00000576862 COG1Q8WTW3 980 aa7.36□□□□□ -1.23
NUP88-213ENST00000576862 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.36□□□□□ -1.23
NUP88-213ENST00000576862 FAM184BQ9ULE4 1060 aa7.36□□□□□ -1.23
NUP88-213ENST00000576862 NR2E1Q9Y466 385 aa7.36□□□□□ -1.23
NUP88-213ENST00000576862 C2orf78A6NCI8 922 aa7.35□□□□□ -1.23
NUP88-213ENST00000576862 HNRNPLP14866 589 aaKnown RBP eCLIP7.35□□□□□ -1.23
NUP88-213ENST00000576862 TRIM25Q14258 630 aaKnown RBP7.35□□□□□ -1.23
NUP88-213ENST00000576862 ZNF568Q3ZCX4 644 aa7.35□□□□□ -1.23
NUP88-213ENST00000576862 CT83Q5H943 113 aa7.35□□□□□ -1.23
NUP88-213ENST00000576862 PITRM1Q5JRX3 1037 aa7.35□□□□□ -1.23
NUP88-213ENST00000576862 IQSEC1Q6DN90 963 aa7.35□□□□□ -1.23
NUP88-213ENST00000576862 OR14K1Q8NGZ2 314 aa7.35□□□□□ -1.23
NUP88-213ENST00000576862 PPP1R14CQ8TAE6 165 aa7.35□□□□□ -1.23
NUP88-213ENST00000576862 WDR92Q96MX6 357 aa7.35□□□□□ -1.23
NUP88-213ENST00000576862 LMF1Q96S06 567 aa7.35□□□□□ -1.23
NUP88-213ENST00000576862 JADE2Q9NQC1 790 aa7.35□□□□□ -1.23
NUP88-213ENST00000576862 MCM8Q9UJA3 840 aa7.35□□□□□ -1.23
NUP88-213ENST00000576862 PCDHB6Q9Y5E3 794 aa7.35□□□□□ -1.23
NUP88-213ENST00000576862 NUMBLQ9Y6R0 609 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms