RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 RAI2Q9Y5P3 530 aa8.41□□□□□ -1.06
RAB40B-210ENST00000576148 ZFP37Q9Y6Q3 630 aaPredicted RBP8.41□□□□□ -1.06
RAB40B-210ENST00000576148 TENM4Q6N022 2769 aa8.41□□□□□ -1.06
RAB40B-210ENST00000576148 MIA3Q5JRA6 1907 aa8.41□□□□□ -1.06
RAB40B-210ENST00000576148 CHURC1-FNTBB4DL54 471 aa8.4□□□□□ -1.06
RAB40B-210ENST00000576148 NT5C1B-RDH14C9J2C7 533 aa8.4□□□□□ -1.06
RAB40B-210ENST00000576148 HYAL3O43820 417 aaPredicted RBP8.4□□□□□ -1.06
RAB40B-210ENST00000576148 NMT2O60551 498 aa8.4□□□□□ -1.06
RAB40B-210ENST00000576148 RPS6KA5O75582 802 aa8.4□□□□□ -1.06
RAB40B-210ENST00000576148 PRB1P04280 392 aa8.4□□□□□ -1.06
RAB40B-210ENST00000576148 CXCL12P48061 93 aa8.4□□□□□ -1.06
RAB40B-210ENST00000576148 FNTBP49356 437 aa8.4□□□□□ -1.06
RAB40B-210ENST00000576148 IGBP1P78318 339 aa8.4□□□□□ -1.06
RAB40B-210ENST00000576148 FAM189BP81408 668 aa8.4□□□□□ -1.06
RAB40B-210ENST00000576148 FZD5Q13467 585 aa8.4□□□□□ -1.06
RAB40B-210ENST00000576148 MARCH8Q5T0T0 291 aa8.4□□□□□ -1.06
RAB40B-210ENST00000576148 CYFIP1Q7L576 1253 aa8.4□□□□□ -1.06
RAB40B-210ENST00000576148 DDX53Q86TM3 631 aaKnown RBP8.4□□□□□ -1.06
RAB40B-210ENST00000576148 ERC1Q8IUD2 1116 aa8.4□□□□□ -1.06
RAB40B-210ENST00000576148 HNRNPLLQ8WVV9 542 aaKnown RBP8.4□□□□□ -1.06
RAB40B-210ENST00000576148 SMG7Q92540 1137 aaKnown RBP8.4□□□□□ -1.06
RAB40B-210ENST00000576148 PHKBQ93100 1093 aa8.4□□□□□ -1.06
RAB40B-210ENST00000576148 LOXL4Q96JB6 756 aa8.4□□□□□ -1.06
RAB40B-210ENST00000576148 PDCD2LQ9BRP1 358 aa8.4□□□□□ -1.06
RAB40B-210ENST00000576148 PIDD1Q9HB75 910 aa8.4□□□□□ -1.06
RAB40B-210ENST00000576148 LAMA5O15230 3695 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 KIAA1217Q5T5P2 1943 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 RRN3P2A6NIE6 340 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 C4orf47A7E2U8 309 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 GPR182O15218 404 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 INPPL1O15357 1258 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 CFBP00751 764 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 CCND2P30279 289 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 BCAR1P56945 870 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 KRT76Q01546 638 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 GNPTABQ3T906 1256 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 PARM1Q6UWI2 310 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 LONP2Q86WA8 852 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 FGF14Q92915 247 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 GPKOWQ92917 476 aaPredicted RBP eCLIP8.39□□□□□ -1.07
RAB40B-210ENST00000576148 CHRDQ9H2X0 955 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 BOLA2Q9H3K6 86 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 MAN1C1Q9NR34 630 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 KLK13Q9UKR3 277 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 GINS2Q9Y248 185 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 MRPL11Q9Y3B7 192 aaKnown RBP8.39□□□□□ -1.07
RAB40B-210ENST00000576148 PCDHA1Q9Y5I3 950 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 ZNF462Q96JM2 2506 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 RALGAPA1Q6GYQ0 2036 aa8.39□□□□□ -1.07
RAB40B-210ENST00000576148 KDM3AQ9Y4C1 1321 aa8.38□□□□□ -1.07
RAB40B-210ENST00000576148 SPTA1P02549 2419 aa8.38□□□□□ -1.07
RAB40B-210ENST00000576148 CARNS1A5YM72 827 aa8.38□□□□□ -1.07
RAB40B-210ENST00000576148 J3QKU1 62 aa8.38□□□□□ -1.07
RAB40B-210ENST00000576148 TK2O00142 265 aa8.38□□□□□ -1.07
RAB40B-210ENST00000576148 LILRB3O75022 631 aa8.38□□□□□ -1.07
RAB40B-210ENST00000576148 CAPNS1P04632 268 aa8.38□□□□□ -1.07
RAB40B-210ENST00000576148 CNPP09543 421 aaKnown RBP8.38□□□□□ -1.07
RAB40B-210ENST00000576148 TOP1P11387 765 aaKnown RBP8.38□□□□□ -1.07
RAB40B-210ENST00000576148 GNAT2P19087 354 aa8.38□□□□□ -1.07
RAB40B-210ENST00000576148 CSRP1P21291 193 aaKnown RBP8.38□□□□□ -1.07
RAB40B-210ENST00000576148 MARK3P27448 753 aa8.38□□□□□ -1.07
RAB40B-210ENST00000576148 SP4Q02446 784 aa8.38□□□□□ -1.07
RAB40B-210ENST00000576148 ZNF543Q08ER8 600 aa8.38□□□□□ -1.07
RAB40B-210ENST00000576148 MTSS1LQ765P7 747 aa8.38□□□□□ -1.07
RAB40B-210ENST00000576148 NME8Q8N427 588 aa8.38□□□□□ -1.07
RAB40B-210ENST00000576148 ARHGAP45Q92619 1136 aa8.38□□□□□ -1.07
RAB40B-210ENST00000576148 ZFP91Q96JP5 570 aaPredicted RBP8.38□□□□□ -1.07
RAB40B-210ENST00000576148 UBL7Q96S82 380 aaPredicted RBP8.38□□□□□ -1.07
RAB40B-210ENST00000576148 EPB41L4AQ9HCS5 686 aaPredicted RBP8.38□□□□□ -1.07
RAB40B-210ENST00000576148 IL1RAPL2Q9NP60 686 aa8.38□□□□□ -1.07
RAB40B-210ENST00000576148 VPS45Q9NRW7 570 aa8.38□□□□□ -1.07
RAB40B-210ENST00000576148 ERAP1Q9NZ08 941 aa8.38□□□□□ -1.07
RAB40B-210ENST00000576148 ST3GAL5Q9UNP4 418 aa8.38□□□□□ -1.07
RAB40B-210ENST00000576148 NOC2LQ9Y3T9 749 aaKnown RBP8.38□□□□□ -1.07
RAB40B-210ENST00000576148 FNDC1Q4ZHG4 1894 aaPredicted RBP8.38□□□□□ -1.07
RAB40B-210ENST00000576148 MAN2B1O00754 1011 aa8.37□□□□□ -1.07
RAB40B-210ENST00000576148 RFPL2O75678 378 aa8.37□□□□□ -1.07
RAB40B-210ENST00000576148 EPN2O95208 641 aa8.37□□□□□ -1.07
RAB40B-210ENST00000576148 IFIT2P09913 472 aaKnown RBP8.37□□□□□ -1.07
RAB40B-210ENST00000576148 PDHBP11177 359 aa8.37□□□□□ -1.07
RAB40B-210ENST00000576148 RDXP35241 583 aaKnown RBP8.37□□□□□ -1.07
RAB40B-210ENST00000576148 NOVP48745 357 aa8.37□□□□□ -1.07
RAB40B-210ENST00000576148 PGM5Q15124 567 aa8.37□□□□□ -1.07
RAB40B-210ENST00000576148 CDC37Q16543 378 aaPredicted RBP8.37□□□□□ -1.07
RAB40B-210ENST00000576148 PLA2G2CQ5R387 149 aa8.37□□□□□ -1.07
RAB40B-210ENST00000576148 HEATR6Q6AI08 1181 aaKnown RBP8.37□□□□□ -1.07
RAB40B-210ENST00000576148 TMEFF1Q8IYR6 380 aa8.37□□□□□ -1.07
RAB40B-210ENST00000576148 SLC39A7Q92504 469 aa8.37□□□□□ -1.07
RAB40B-210ENST00000576148 ZBTB10Q96DT7 871 aa8.37□□□□□ -1.07
RAB40B-210ENST00000576148 EDEM2Q9BV94 578 aa8.37□□□□□ -1.07
RAB40B-210ENST00000576148 MRPL9Q9BYD2 267 aaKnown RBP8.37□□□□□ -1.07
RAB40B-210ENST00000576148 NACAP1Q9BZK3 213 aa8.37□□□□□ -1.07
RAB40B-210ENST00000576148 SMOC1Q9H4F8 434 aa8.37□□□□□ -1.07
RAB40B-210ENST00000576148 NDRG2Q9UN36 371 aaKnown RBP8.37□□□□□ -1.07
RAB40B-210ENST00000576148 PCDHGA5Q9Y5G8 931 aa8.37□□□□□ -1.07
RAB40B-210ENST00000576148 ASXL3Q9C0F0 2248 aa8.36□□□□□ -1.07
RAB40B-210ENST00000576148 SPATA31C2B4DYI2 1134 aa8.36□□□□□ -1.07
RAB40B-210ENST00000576148 PATL2C9JE40 543 aaKnown RBP8.36□□□□□ -1.07
RAB40B-210ENST00000576148 RANBP6O60518 1105 aaKnown RBP8.36□□□□□ -1.07
RAB40B-210ENST00000576148 ZC3H11AO75152 810 aaKnown RBP eCLIP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms