RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 PIGWQ7Z7B1 504 aa15.71■□□□□ 0.11
SCARF1-209ENST00000576012 FITM2Q8N6M3 262 aa15.71■□□□□ 0.11
SCARF1-209ENST00000576012 C1orf131Q8NDD1 294 aaKnown RBP15.71■□□□□ 0.11
SCARF1-209ENST00000576012 KRT35Q92764 455 aa15.71■□□□□ 0.11
SCARF1-209ENST00000576012 EYA3Q99504 573 aa15.71■□□□□ 0.11
SCARF1-209ENST00000576012 ATP8A2Q9NTI2 1148 aa15.71■□□□□ 0.11
SCARF1-209ENST00000576012 STK17AQ9UEE5 414 aa15.71■□□□□ 0.11
SCARF1-209ENST00000576012 DDX25Q9UHL0 483 aaKnown RBP15.71■□□□□ 0.11
SCARF1-209ENST00000576012 GOLGA6L10A0A0M3HER8 536 aa15.71■□□□□ 0.11
SCARF1-209ENST00000576012 RSPH10B2B2RC85 870 aa15.71■□□□□ 0.11
SCARF1-209ENST00000576012 SNX3O60493 162 aa15.71■□□□□ 0.11
SCARF1-209ENST00000576012 FGRP09769 529 aa15.71■□□□□ 0.11
SCARF1-209ENST00000576012 RSPH10BP0C881 870 aa15.71■□□□□ 0.11
SCARF1-209ENST00000576012 MSH2P43246 934 aa15.71■□□□□ 0.11
SCARF1-209ENST00000576012 CCDC65Q8IXS2 484 aa15.71■□□□□ 0.11
SCARF1-209ENST00000576012 CTNNBL1Q8WYA6 563 aaPredicted RBP15.71■□□□□ 0.11
SCARF1-209ENST00000576012 BTBD6Q96KE9 485 aa15.71■□□□□ 0.11
SCARF1-209ENST00000576012 FAM118BQ9BPY3 351 aa15.71■□□□□ 0.11
SCARF1-209ENST00000576012 NSRP1Q9H0G5 558 aaKnown RBP15.71■□□□□ 0.11
SCARF1-209ENST00000576012 THAP2Q9H0W7 228 aa15.71■□□□□ 0.11
SCARF1-209ENST00000576012 NKX1-2Q9UD57 310 aaPredicted RBP15.71■□□□□ 0.11
SCARF1-209ENST00000576012 LTBP4Q8N2S1 1624 aa15.71■□□□□ 0.1
SCARF1-209ENST00000576012 AKAP3O75969 853 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 SLURP2P0DP57 97 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 MMP13P45452 471 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 PSMC6P62333 389 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 ZCWPW2Q504Y3 356 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 C12orf60Q5U649 245 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 AP1ARQ63HQ0 302 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 CAPN12Q6ZSI9 719 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 ARHGEF2Q92974 986 aaKnown RBP15.7■□□□□ 0.1
SCARF1-209ENST00000576012 L3MBTL3Q96JM7 780 aaPredicted RBP15.7■□□□□ 0.1
SCARF1-209ENST00000576012 MXD3Q9BW11 206 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 SLITRK6Q9H5Y7 841 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 USP15Q9Y4E8 981 aaPredicted RBP15.7■□□□□ 0.1
SCARF1-209ENST00000576012 PALM3A6NDB9 673 aaPredicted RBP15.7■□□□□ 0.1
SCARF1-209ENST00000576012 TOM1O60784 492 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 PPFIA2O75334 1257 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 ABL2P42684 1182 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 LACTBP83111 547 aaPredicted RBP15.7■□□□□ 0.1
SCARF1-209ENST00000576012 ATP11AP98196 1134 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 MESDQ14696 234 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 HP1BP3Q5SSJ5 553 aaPredicted RBP15.7■□□□□ 0.1
SCARF1-209ENST00000576012 PHLDB2Q86SQ0 1253 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 LONP2Q86WA8 852 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 ELMO3Q96BJ8 720 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 CEP95Q96GE4 821 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 AFPP02771 609 aaKnown RBP15.7■□□□□ 0.1
SCARF1-209ENST00000576012 ATP2A2P16615 1042 aaKnown RBP15.7■□□□□ 0.1
SCARF1-209ENST00000576012 SLC8A3P57103 927 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 NKX1-1Q15270 411 aaPredicted RBP15.7■□□□□ 0.1
SCARF1-209ENST00000576012 C3orf20Q8ND61 904 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 MAGEC3Q8TD91 643 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 CALR3Q96L12 384 aaKnown RBP15.7■□□□□ 0.1
SCARF1-209ENST00000576012 MTMR9Q96QG7 549 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 EDEM3Q9BZQ6 932 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 ADAM22Q9P0K1 906 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 CTTNBP2NLQ9P2B4 639 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 ABCA3Q99758 1704 aa15.7■□□□□ 0.1
SCARF1-209ENST00000576012 DUOX1Q9NRD9 1551 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 USP17L15C9J2P7 530 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 USP17L13C9JLJ4 530 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 USP17L11C9JVI0 530 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 USP17L18D6R9N7 530 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 USP17L22D6RA61 530 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 USP17L17D6RBQ6 530 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 USP17L19D6RCP7 530 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 USP17L20D6RJB6 530 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 UBAP1LF5GYI3 381 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 EIF3BP55884 814 aaKnown RBP15.69■□□□□ 0.1
SCARF1-209ENST00000576012 COPS2P61201 443 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 IRX1P78414 480 aaPredicted RBP15.69■□□□□ 0.1
SCARF1-209ENST00000576012 USP17L24Q0WX57 530 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 CNGA2Q16280 664 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 MIS18BP1Q6P0N0 1132 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 USP17L6PQ6QN14 398 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 EXOC3L1Q86VI1 746 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 SFR1Q86XK3 245 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 SYN2Q92777 582 aaPredicted RBP15.69■□□□□ 0.1
SCARF1-209ENST00000576012 PPP1R12CQ9BZL4 782 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 USP40Q9NVE5 1235 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 ADAMTS7Q9UKP4 1686 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 UTRNP46939 3433 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 SMIM24O75264 130 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 RFC4P35249 363 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 PDE6CP51160 858 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 ADCY7P51828 1080 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 LNX1Q8TBB1 728 aaPredicted RBP15.69■□□□□ 0.1
SCARF1-209ENST00000576012 RPTORQ8N122 1335 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 GLI3P10071 1580 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 NUP188Q5SRE5 1749 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 ASAP2O43150 1006 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 MAP3K13O43283 966 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 SUN1O94901 812 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 GCNT3O95395 438 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 TRIM49P0CI25 452 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 TRIM49CP0CI26 452 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 TARSP26639 723 aaKnown RBP15.69■□□□□ 0.1
SCARF1-209ENST00000576012 KLRC3Q07444 240 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 TTBK2Q6IQ55 1244 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms