RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 SLC16A1P53985 500 aa11.2□□□□□ -0.62
USP6-206ENST00000575709 RBM6P78332 1123 aaKnown RBP11.2□□□□□ -0.62
USP6-206ENST00000575709 EPN3Q9H201 632 aa11.2□□□□□ -0.62
USP6-206ENST00000575709 NAIPQ13075 1403 aa11.2□□□□□ -0.62
USP6-206ENST00000575709 TNFRSF21O75509 655 aa11.2□□□□□ -0.62
USP6-206ENST00000575709 SKAP2O75563 359 aaPredicted RBP11.2□□□□□ -0.62
USP6-206ENST00000575709 ZNF18P17022 549 aa11.2□□□□□ -0.62
USP6-206ENST00000575709 CAPZA2P47755 286 aa11.2□□□□□ -0.62
USP6-206ENST00000575709 SHROOM1Q2M3G4 852 aaPredicted RBP11.2□□□□□ -0.62
USP6-206ENST00000575709 PDZK1Q5T2W1 519 aa11.2□□□□□ -0.62
USP6-206ENST00000575709 SARM1Q6SZW1 724 aa11.2□□□□□ -0.62
USP6-206ENST00000575709 HACE1Q8IYU2 909 aa11.2□□□□□ -0.62
USP6-206ENST00000575709 FRMD6Q96NE9 622 aa11.2□□□□□ -0.62
USP6-206ENST00000575709 NRDE2Q9H7Z3 1164 aa11.2□□□□□ -0.62
USP6-206ENST00000575709 PLEKHM2Q8IWE5 1019 aa11.2□□□□□ -0.62
USP6-206ENST00000575709 C20orf96Q9NUD7 363 aaPredicted RBP11.2□□□□□ -0.62
USP6-206ENST00000575709 ZC3H7BQ9UGR2 993 aaKnown RBP11.2□□□□□ -0.62
USP6-206ENST00000575709 TRIM43BA6NCK2 446 aa11.2□□□□□ -0.62
USP6-206ENST00000575709 ARF3P61204 181 aaPredicted RBP11.2□□□□□ -0.62
USP6-206ENST00000575709 ARF1P84077 181 aaKnown RBP11.2□□□□□ -0.62
USP6-206ENST00000575709 DMP1Q13316 513 aaPredicted RBP11.2□□□□□ -0.62
USP6-206ENST00000575709 FAM162AQ96A26 154 aa11.2□□□□□ -0.62
USP6-206ENST00000575709 EML4Q9HC35 981 aaKnown RBP11.2□□□□□ -0.62
USP6-206ENST00000575709 CHPF2Q9P2E5 772 aa11.2□□□□□ -0.62
USP6-206ENST00000575709 MAPRE2Q15555 327 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 SLC25A24Q6NUK1 477 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 TERB1Q8NA31 727 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 SARS2Q9NP81 518 aaKnown RBP11.19□□□□□ -0.62
USP6-206ENST00000575709 SPTLC3Q9NUV7 552 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 RNF14Q9UBS8 474 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 SUPT3HB4E1H0 165 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 AHCYL1O43865 530 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 SORBS3O60504 671 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 SRGAP2O75044 1071 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 ABATP80404 500 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 TRIQKQ629K1 86 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 CCSAPQ6IQ19 270 aaPredicted RBP11.19□□□□□ -0.62
USP6-206ENST00000575709 PGBD2Q6P3X8 592 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 ZBED1O96006 694 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 ABCD1P33897 745 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 MFAP3P55082 362 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 MMRN1Q13201 1228 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 TTC8Q8TAM2 541 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 CEP95Q96GE4 821 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 CCDC28BQ9BUN5 200 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 PLEKHA5Q9HAU0 1116 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 EMC3Q9P0I2 261 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 GRM8O00222 908 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 HNRNPH1P31943 449 aaKnown RBP11.19□□□□□ -0.62
USP6-206ENST00000575709 CSE1LP55060 971 aaKnown RBP11.19□□□□□ -0.62
USP6-206ENST00000575709 OTUD4Q01804 1114 aaKnown RBP11.19□□□□□ -0.62
USP6-206ENST00000575709 NR1H3Q13133 447 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 KIF2BQ8N4N8 673 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 VPS39Q96JC1 886 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 TMEM87BQ96K49 555 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 GOLPH3LQ9H4A5 285 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 HERC5Q9UII4 1024 aaKnown RBP11.19□□□□□ -0.62
USP6-206ENST00000575709 C1orf232A0A0U1RR37 186 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 PODXLO00592 558 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 ANXA1P04083 346 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 ARL4AP40617 200 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 SERPINH1P50454 418 aaKnown RBP11.19□□□□□ -0.62
USP6-206ENST00000575709 MIEF2Q96C03 454 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 CATSPER2Q96P56 530 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 MRPL1Q9BYD6 325 aaKnown RBP11.19□□□□□ -0.62
USP6-206ENST00000575709 TMEM165Q9HC07 324 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 ALG13Q9NP73 1137 aaKnown RBP11.19□□□□□ -0.62
USP6-206ENST00000575709 IL1RAPL1Q9NZN1 696 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 RALBP11234 206 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 PLCG2P16885 1265 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 ITGA3P26006 1051 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 PDAP1Q13442 181 aaKnown RBP11.19□□□□□ -0.62
USP6-206ENST00000575709 ANKRD44Q8N8A2 993 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 TADA1Q96BN2 335 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 ITGB1BP2Q9UKP3 347 aa11.19□□□□□ -0.62
USP6-206ENST00000575709 PSTPIP1O43586 416 aa11.18□□□□□ -0.62
USP6-206ENST00000575709 USP1O94782 785 aa11.18□□□□□ -0.62
USP6-206ENST00000575709 PPARGP37231 505 aaPredicted RBP11.18□□□□□ -0.62
USP6-206ENST00000575709 LLGL2Q6P1M3 1020 aa11.18□□□□□ -0.62
USP6-206ENST00000575709 KRT25Q7Z3Z0 450 aa11.18□□□□□ -0.62
USP6-206ENST00000575709 IFNEQ86WN2 208 aa11.18□□□□□ -0.62
USP6-206ENST00000575709 CUEDC2Q9H467 287 aa11.18□□□□□ -0.62
USP6-206ENST00000575709 POLR1BQ9H9Y6 1135 aa11.18□□□□□ -0.62
USP6-206ENST00000575709 CHMP1AQ9HD42 196 aaPredicted RBP11.18□□□□□ -0.62
USP6-206ENST00000575709 SNX14Q9Y5W7 946 aa11.18□□□□□ -0.62
USP6-206ENST00000575709 MEIS1O00470 390 aa11.18□□□□□ -0.62
USP6-206ENST00000575709 P4HA2O15460 535 aa11.18□□□□□ -0.62
USP6-206ENST00000575709 BRD1O95696 1058 aa11.18□□□□□ -0.62
USP6-206ENST00000575709 EFR3AQ14156 821 aa11.18□□□□□ -0.62
USP6-206ENST00000575709 USF2Q15853 346 aaPredicted RBP11.18□□□□□ -0.62
USP6-206ENST00000575709 DDI2Q5TDH0 399 aa11.18□□□□□ -0.62
USP6-206ENST00000575709 CC2D1AQ6P1N0 951 aaPredicted RBP11.18□□□□□ -0.62
USP6-206ENST00000575709 ZNF473Q8WTR7 871 aaKnown RBP11.18□□□□□ -0.62
USP6-206ENST00000575709 SEC16BQ96JE7 1060 aa11.18□□□□□ -0.62
USP6-206ENST00000575709 ZWILCHQ9H900 591 aa11.18□□□□□ -0.62
USP6-206ENST00000575709 GTF2A1LQ9UNN4 478 aa11.18□□□□□ -0.62
USP6-206ENST00000575709 FGGP02679 453 aa11.18□□□□□ -0.62
USP6-206ENST00000575709 BRAFP15056 766 aa11.18□□□□□ -0.62
USP6-206ENST00000575709 ARPP19P56211 112 aa11.18□□□□□ -0.62
USP6-206ENST00000575709 SMAD1Q15797 465 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms