RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	DARS	P14868	501 aa	Known RBP	28.23	■■■□□ 2.11
SRRM2-223	ENST00000575701	ATP2C1	P98194	919 aa	Predicted RBP	28.23	■■■□□ 2.11
SRRM2-223	ENST00000575701	DTHD1	Q6ZMT9	781 aa		28.23	■■■□□ 2.11
SRRM2-223	ENST00000575701	IGSF22	Q8N9C0	903 aa		28.23	■■■□□ 2.11
SRRM2-223	ENST00000575701	SP7	Q8TDD2	431 aa	Predicted RBP	28.23	■■■□□ 2.11
SRRM2-223	ENST00000575701	PSPC1	Q8WXF1	523 aa	Known RBP	28.23	■■■□□ 2.11
SRRM2-223	ENST00000575701	LINC01599	Q8WXQ3	324 aa		28.23	■■■□□ 2.11
SRRM2-223	ENST00000575701	MYLIP	Q8WY64	445 aa		28.23	■■■□□ 2.11
SRRM2-223	ENST00000575701	NACC1	Q96RE7	527 aa		28.23	■■■□□ 2.11
SRRM2-223	ENST00000575701	YME1L1	Q96TA2	773 aa		28.23	■■■□□ 2.11
SRRM2-223	ENST00000575701	MTR	Q99707	1265 aa		28.23	■■■□□ 2.11
SRRM2-223	ENST00000575701	GCOM2	Q9BZD3	368 aa	Predicted RBP	28.23	■■■□□ 2.11
SRRM2-223	ENST00000575701	INO80B	Q9C086	356 aa	Predicted RBP	28.23	■■■□□ 2.11
SRRM2-223	ENST00000575701	TMX1	Q9H3N1	280 aa		28.23	■■■□□ 2.11
SRRM2-223	ENST00000575701	C1orf112	Q9NSG2	853 aa		28.23	■■■□□ 2.11
SRRM2-223	ENST00000575701	RBAK-RBAKDN	I3L0D1	243 aa		28.22	■■■□□ 2.11
SRRM2-223	ENST00000575701	ZBTB39	O15060	712 aa		28.22	■■■□□ 2.11
SRRM2-223	ENST00000575701	MED24	O75448	989 aa		28.22	■■■□□ 2.11
SRRM2-223	ENST00000575701	UPP2	O95045	317 aa		28.22	■■■□□ 2.11
SRRM2-223	ENST00000575701	FOSL2	P15408	326 aa		28.22	■■■□□ 2.11
SRRM2-223	ENST00000575701	RARRES1	P49788	294 aa		28.22	■■■□□ 2.11
SRRM2-223	ENST00000575701	RHPN2	Q8IUC4	686 aa		28.22	■■■□□ 2.11
SRRM2-223	ENST00000575701	GAS2L1	Q99501	681 aa	Predicted RBP	28.22	■■■□□ 2.11
SRRM2-223	ENST00000575701	DBR1	Q9UK59	544 aa	Known RBP	28.22	■■■□□ 2.11
SRRM2-223	ENST00000575701	TTC3	P53804	2025 aa		28.21	■■■□□ 2.11
SRRM2-223	ENST00000575701	DENND3	A2RUS2	1198 aa		28.21	■■■□□ 2.11
SRRM2-223	ENST00000575701	LCHN	A4D1U4	455 aa		28.21	■■■□□ 2.11
SRRM2-223	ENST00000575701	BMP15	O95972	392 aa		28.21	■■■□□ 2.11
SRRM2-223	ENST00000575701	STAG3L1	P0CL83	205 aa		28.21	■■■□□ 2.11
SRRM2-223	ENST00000575701	SYT1	P21579	422 aa		28.21	■■■□□ 2.11
SRRM2-223	ENST00000575701	ARL6IP4	Q66PJ3	421 aa	Known RBP	28.21	■■■□□ 2.11
SRRM2-223	ENST00000575701	RTN4RL1	Q86UN2	441 aa	Predicted RBP	28.21	■■■□□ 2.11
SRRM2-223	ENST00000575701	NPAS4	Q8IUM7	802 aa		28.21	■■■□□ 2.11
SRRM2-223	ENST00000575701	PRDM12	Q9H4Q4	367 aa		28.21	■■■□□ 2.11
SRRM2-223	ENST00000575701	ATP6V0A4	Q9HBG4	840 aa		28.21	■■■□□ 2.11
SRRM2-223	ENST00000575701	RGS18	Q9NS28	235 aa		28.21	■■■□□ 2.11
SRRM2-223	ENST00000575701	COL4A3BP	Q9Y5P4	624 aa		28.21	■■■□□ 2.11
SRRM2-223	ENST00000575701	ASAP2	O43150	1006 aa		28.2	■■■□□ 2.1
SRRM2-223	ENST00000575701	PIGO	Q8TEQ8	1089 aa		28.2	■■■□□ 2.1
SRRM2-223	ENST00000575701		A0A087WZ62	844 aa		28.19	■■■□□ 2.1
SRRM2-223	ENST00000575701	LINC01553	A4QN01	128 aa		28.19	■■■□□ 2.1
SRRM2-223	ENST00000575701	SFPQ	P23246	707 aa	Known RBP eCLIP	28.19	■■■□□ 2.1
SRRM2-223	ENST00000575701	CCT6A	P40227	531 aa	Known RBP	28.19	■■■□□ 2.1
SRRM2-223	ENST00000575701	SARS	P49591	514 aa	Known RBP	28.19	■■■□□ 2.1
SRRM2-223	ENST00000575701	SLC24A5	Q71RS6	500 aa		28.19	■■■□□ 2.1
SRRM2-223	ENST00000575701	TMEM143	Q96AN5	459 aa		28.19	■■■□□ 2.1
SRRM2-223	ENST00000575701	ZNF668	Q96K58	619 aa	Predicted RBP	28.19	■■■□□ 2.1
SRRM2-223	ENST00000575701	NLRP4	Q96MN2	994 aa		28.19	■■■□□ 2.1
SRRM2-223	ENST00000575701	ADAM2	Q99965	735 aa		28.19	■■■□□ 2.1
SRRM2-223	ENST00000575701	FDXACB1	Q9BRP7	624 aa	Predicted RBP	28.19	■■■□□ 2.1
SRRM2-223	ENST00000575701	ARHGEF15	O94989	841 aa		28.18	■■■□□ 2.1
SRRM2-223	ENST00000575701	ZSCAN20	P17040	1043 aa	Predicted RBP	28.18	■■■□□ 2.1
SRRM2-223	ENST00000575701	MXD4	Q14582	209 aa	Predicted RBP	28.18	■■■□□ 2.1
SRRM2-223	ENST00000575701	KRT79	Q5XKE5	535 aa		28.18	■■■□□ 2.1
SRRM2-223	ENST00000575701	POTEG	Q6S5H5	508 aa		28.18	■■■□□ 2.1
SRRM2-223	ENST00000575701	SNX29	Q8TEQ0	813 aa		28.18	■■■□□ 2.1
SRRM2-223	ENST00000575701	PRPF31	Q8WWY3	499 aa	Known RBP	28.18	■■■□□ 2.1
SRRM2-223	ENST00000575701	TGS1	Q96RS0	853 aa	Known RBP	28.18	■■■□□ 2.1
SRRM2-223	ENST00000575701	XPNPEP1	Q9NQW7	623 aa		28.18	■■■□□ 2.1
SRRM2-223	ENST00000575701	BMP2K	Q9NSY1	1161 aa	Predicted RBP	28.18	■■■□□ 2.1
SRRM2-223	ENST00000575701	MGEA5	O60502	916 aa		28.17	■■■□□ 2.1
SRRM2-223	ENST00000575701	ERVK-21	P61565	698 aa		28.17	■■■□□ 2.1
SRRM2-223	ENST00000575701	DSC3	Q14574	896 aa		28.17	■■■□□ 2.1
SRRM2-223	ENST00000575701	FERMT3	Q86UX7	667 aa		28.17	■■■□□ 2.1
SRRM2-223	ENST00000575701	CRIPAK	Q8N1N5	446 aa		28.17	■■■□□ 2.1
SRRM2-223	ENST00000575701	SAMD11	Q96NU1	681 aa		28.17	■■■□□ 2.1
SRRM2-223	ENST00000575701	RC3H2	Q9HBD1	1191 aa	Known RBP	28.17	■■■□□ 2.1
SRRM2-223	ENST00000575701	LRFN2	Q9ULH4	789 aa		28.17	■■■□□ 2.1
SRRM2-223	ENST00000575701	ADGRA3	Q8IWK6	1321 aa		28.17	■■■□□ 2.1
SRRM2-223	ENST00000575701	DGKI	O75912	1065 aa		28.16	■■■□□ 2.1
SRRM2-223	ENST00000575701	HSP90AA1	P07900	732 aa	Known RBP	28.16	■■■□□ 2.1
SRRM2-223	ENST00000575701	PDIA4	P13667	645 aa	Known RBP	28.16	■■■□□ 2.1
SRRM2-223	ENST00000575701	LAMTOR4	Q0VGL1	99 aa		28.16	■■■□□ 2.1
SRRM2-223	ENST00000575701	KSR1	Q8IVT5	923 aa		28.16	■■■□□ 2.1
SRRM2-223	ENST00000575701	MCPH1	Q8NEM0	835 aa		28.16	■■■□□ 2.1
SRRM2-223	ENST00000575701	FOXD4L1	Q9NU39	408 aa		28.16	■■■□□ 2.1
SRRM2-223	ENST00000575701	CDH23	Q9H251	3354 aa		28.16	■■■□□ 2.1
SRRM2-223	ENST00000575701	CHD9	Q3L8U1	2897 aa		28.15	■■■□□ 2.1
SRRM2-223	ENST00000575701		C9IYK1	514 aa		28.15	■■■□□ 2.1
SRRM2-223	ENST00000575701	TFDP1	Q14186	410 aa		28.15	■■■□□ 2.1
SRRM2-223	ENST00000575701	IL17A	Q16552	155 aa		28.15	■■■□□ 2.1
SRRM2-223	ENST00000575701	SRGAP1	Q7Z6B7	1085 aa		28.15	■■■□□ 2.1
SRRM2-223	ENST00000575701	ARNTL2	Q8WYA1	636 aa		28.15	■■■□□ 2.1
SRRM2-223	ENST00000575701	ZNF689	Q96CS4	500 aa	Predicted RBP	28.15	■■■□□ 2.1
SRRM2-223	ENST00000575701	ELAC1	Q9H777	363 aa	Known RBP	28.15	■■■□□ 2.1
SRRM2-223	ENST00000575701	IFT122	Q9HBG6	1241 aa		28.15	■■■□□ 2.1
SRRM2-223	ENST00000575701	CHST12	Q9NRB3	414 aa		28.15	■■■□□ 2.1
SRRM2-223	ENST00000575701	DACT1	Q9NYF0	836 aa		28.15	■■■□□ 2.1
SRRM2-223	ENST00000575701	PCDHB7	Q9Y5E2	793 aa		28.15	■■■□□ 2.1
SRRM2-223	ENST00000575701	ARHGEF35	A5YM69	484 aa		28.14	■■■□□ 2.1
SRRM2-223	ENST00000575701	STX6	O43752	255 aa		28.14	■■■□□ 2.1
SRRM2-223	ENST00000575701	USO1	O60763	962 aa	Known RBP	28.14	■■■□□ 2.1
SRRM2-223	ENST00000575701	POU5F1B	Q06416	359 aa		28.14	■■■□□ 2.1
SRRM2-223	ENST00000575701	REST	Q13127	1097 aa		28.14	■■■□□ 2.1
SRRM2-223	ENST00000575701	KCTD17	Q8N5Z5	321 aa		28.14	■■■□□ 2.1
SRRM2-223	ENST00000575701	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	28.14	■■■□□ 2.1
SRRM2-223	ENST00000575701	CERS4	Q9HA82	394 aa		28.14	■■■□□ 2.1
SRRM2-223	ENST00000575701	MTMR6	Q9Y217	621 aa		28.14	■■■□□ 2.1
SRRM2-223	ENST00000575701	RALGAPA2	Q2PPJ7	1873 aa		28.13	■■■□□ 2.09
SRRM2-223	ENST00000575701	PHKA2	P46019	1235 aa		28.13	■■■□□ 2.09

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms