RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 CAPZA3Q96KX2 299 aa15.35■□□□□ 0.05
VPS33B-208ENST00000574755 TIPINQ9BVW5 301 aa15.35■□□□□ 0.05
VPS33B-208ENST00000574755 MOV10L1Q9BXT6 1211 aaKnown RBP15.35■□□□□ 0.05
VPS33B-208ENST00000574755 SIX2Q9NPC8 291 aa15.35■□□□□ 0.05
VPS33B-208ENST00000574755 PCDHA10Q9Y5I2 948 aa15.35■□□□□ 0.05
VPS33B-208ENST00000574755 DOCK5Q9H7D0 1870 aa15.35■□□□□ 0.05
VPS33B-208ENST00000574755 A0A087X0T9 212 aa15.35■□□□□ 0.05
VPS33B-208ENST00000574755 DDNO94850 711 aaPredicted RBP15.35■□□□□ 0.05
VPS33B-208ENST00000574755 FAM228BP0C875 321 aa15.35■□□□□ 0.05
VPS33B-208ENST00000574755 FMO5P49326 533 aa15.35■□□□□ 0.05
VPS33B-208ENST00000574755 NPEPPSP55786 919 aa15.35■□□□□ 0.05
VPS33B-208ENST00000574755 VGLL4Q14135 290 aa15.35■□□□□ 0.05
VPS33B-208ENST00000574755 SLC9A9Q8IVB4 645 aa15.35■□□□□ 0.05
VPS33B-208ENST00000574755 RDM1Q8NG50 284 aa15.35■□□□□ 0.05
VPS33B-208ENST00000574755 RBM46Q8TBY0 533 aaKnown RBP15.35■□□□□ 0.05
VPS33B-208ENST00000574755 ACCSQ96QU6 501 aa15.35■□□□□ 0.05
VPS33B-208ENST00000574755 ANKZF1Q9H8Y5 726 aa15.35■□□□□ 0.05
VPS33B-208ENST00000574755 GPRC5CQ9NQ84 441 aa15.35■□□□□ 0.05
VPS33B-208ENST00000574755 FBXL5Q9UKA1 691 aa15.35■□□□□ 0.05
VPS33B-208ENST00000574755 NAP1L1P55209 391 aaKnown RBP15.34■□□□□ 0.05
VPS33B-208ENST00000574755 PEX3P56589 373 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 PTK2Q05397 1052 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 BMS1Q14692 1282 aaKnown RBP15.34■□□□□ 0.05
VPS33B-208ENST00000574755 PPP2R5AQ15172 486 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 FAM102BQ5T8I3 360 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 IRF2BP2Q7Z5L9 587 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 ANKEF1Q9NU02 776 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 SALL4Q9UJQ4 1053 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 BZW2Q9Y6E2 419 aaKnown RBP15.34■□□□□ 0.05
VPS33B-208ENST00000574755 MYPNQ86TC9 1320 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 POTEB2H3BUK9 544 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 RGS20O76081 388 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 SEC31AO94979 1220 aaKnown RBP15.34■□□□□ 0.05
VPS33B-208ENST00000574755 RHOXF2BP0C7M4 288 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 TRIM49P0CI25 452 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 TRIM49CP0CI26 452 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 KCNA2P16389 499 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 CKAP4Q07065 602 aaKnown RBP15.34■□□□□ 0.05
VPS33B-208ENST00000574755 BFSP1Q12934 665 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 GJB7Q6PEY0 223 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 DLK2Q6UY11 383 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.34■□□□□ 0.05
VPS33B-208ENST00000574755 HAUS6Q7Z4H7 955 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 NOX5Q96PH1 765 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 RHOXF2Q9BQY4 288 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 PCIF1Q9H4Z3 704 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 GABBR1Q9UBS5 961 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 SNCAIPQ9Y6H5 919 aa15.34■□□□□ 0.05
VPS33B-208ENST00000574755 TISP43B9A030 160 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 BUB1O43683 1085 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 ZRANB2O95218 330 aaKnown RBP eCLIP15.33■□□□□ 0.04
VPS33B-208ENST00000574755 PTPRFP10586 1907 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 SP4Q02446 784 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 MYBPC2Q14324 1141 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 CBWD6Q4V339 395 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 SH3D19Q5HYK7 790 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 CBWD3Q5JTY5 395 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 CBWD5Q5RIA9 395 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 CC2D1AQ6P1N0 951 aaPredicted RBP15.33■□□□□ 0.04
VPS33B-208ENST00000574755 ANO5Q75V66 913 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 SMAP1Q8IYB5 467 aaPredicted RBP15.33■□□□□ 0.04
VPS33B-208ENST00000574755 RNF10Q8N5U6 811 aaKnown RBP15.33■□□□□ 0.04
VPS33B-208ENST00000574755 NOA1Q8NC60 698 aaKnown RBP15.33■□□□□ 0.04
VPS33B-208ENST00000574755 CAGE1Q8TC20 777 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 CDHR1Q96JP9 859 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 MMS19Q96T76 1030 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 SENP7Q9BQF6 1050 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 ARFGAP3Q9NP61 516 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 AJAP1Q9UKB5 411 aaPredicted RBP15.33■□□□□ 0.04
VPS33B-208ENST00000574755 ZNF185O15231 689 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 SLC16A4O15374 487 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 GTF2BQ00403 316 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 KIAA0753Q2KHM9 967 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 GNPTABQ3T906 1256 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 IQCEQ6IPM2 695 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 ZNF571Q7Z3V5 609 aaPredicted RBP15.33■□□□□ 0.04
VPS33B-208ENST00000574755 MSANTD4Q8NCY6 345 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 ATP6V0A1Q93050 837 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 JPH1Q9HDC5 661 aaPredicted RBP15.33■□□□□ 0.04
VPS33B-208ENST00000574755 SNX12Q9UMY4 172 aa15.33■□□□□ 0.04
VPS33B-208ENST00000574755 CCDC151A5D8V7 595 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 STAM2O75886 525 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 KRT13P13646 458 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 JAM2P57087 298 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 MYL7Q01449 175 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 OTUD6AQ7L8S5 288 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 KRT222Q8N1A0 295 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 DCPSQ96C86 337 aaKnown RBP15.32■□□□□ 0.04
VPS33B-208ENST00000574755 ST6GALNAC4Q9H4F1 302 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 ADARB2Q9NS39 739 aaKnown RBP15.32■□□□□ 0.04
VPS33B-208ENST00000574755 CSADQ9Y600 493 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 LOC285556D6RIA3 1793 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 LCTP09848 1927 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 CCDC169A6NNP5 214 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 PSAPP07602 524 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 PNMA6AP0CW24 399 aaPredicted RBP15.32■□□□□ 0.04
VPS33B-208ENST00000574755 NCKAP1LP55160 1127 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 GLIPR1L2Q4G1C9 344 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 TREML2Q5T2D2 321 aa15.32■□□□□ 0.04
VPS33B-208ENST00000574755 INTS8Q75QN2 995 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms