RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 MECOMQ03112 1051 aa15.58■□□□□ 0.08
SMG6-215ENST00000574501 MGAT5Q09328 741 aa15.58■□□□□ 0.08
SMG6-215ENST00000574501 TMEM266Q2M3C6 531 aa15.58■□□□□ 0.08
SMG6-215ENST00000574501 KRT79Q5XKE5 535 aa15.58■□□□□ 0.08
SMG6-215ENST00000574501 SLC35G2Q8TBE7 412 aa15.58■□□□□ 0.08
SMG6-215ENST00000574501 PLCD4Q9BRC7 762 aa15.58■□□□□ 0.08
SMG6-215ENST00000574501 CRNKL1Q9BZJ0 848 aaKnown RBP15.58■□□□□ 0.08
SMG6-215ENST00000574501 C6orf50Q9HD87 102 aa15.58■□□□□ 0.08
SMG6-215ENST00000574501 KCNK9Q9NPC2 374 aa15.58■□□□□ 0.08
SMG6-215ENST00000574501 RIPK2O43353 540 aa15.57■□□□□ 0.08
SMG6-215ENST00000574501 GJB6O95452 261 aa15.57■□□□□ 0.08
SMG6-215ENST00000574501 PON1P27169 355 aa15.57■□□□□ 0.08
SMG6-215ENST00000574501 RPS6KA3P51812 740 aa15.57■□□□□ 0.08
SMG6-215ENST00000574501 RAD23BP54727 409 aa15.57■□□□□ 0.08
SMG6-215ENST00000574501 MAPK7Q13164 816 aa15.57■□□□□ 0.08
SMG6-215ENST00000574501 DGKHQ86XP1 1220 aa15.57■□□□□ 0.08
SMG6-215ENST00000574501 NSUN4Q96CB9 384 aaKnown RBP15.57■□□□□ 0.08
SMG6-215ENST00000574501 ZHX3Q9H4I2 956 aa15.57■□□□□ 0.08
SMG6-215ENST00000574501 PAPPAQ13219 1627 aa15.57■□□□□ 0.08
SMG6-215ENST00000574501 GNAZP19086 355 aa15.57■□□□□ 0.08
SMG6-215ENST00000574501 EXOC3L4Q17RC7 722 aa15.57■□□□□ 0.08
SMG6-215ENST00000574501 HERC4Q5GLZ8 1057 aaPredicted RBP15.57■□□□□ 0.08
SMG6-215ENST00000574501 DCAF17Q5H9S7 520 aaPredicted RBP15.57■□□□□ 0.08
SMG6-215ENST00000574501 CWF19L1Q69YN2 538 aaKnown RBP15.57■□□□□ 0.08
SMG6-215ENST00000574501 TEX9Q8N6V9 391 aa15.57■□□□□ 0.08
SMG6-215ENST00000574501 CNBD1Q8NA66 436 aa15.57■□□□□ 0.08
SMG6-215ENST00000574501 SCFD1Q8WVM8 642 aa15.57■□□□□ 0.08
SMG6-215ENST00000574501 CRAMP1Q96RY5 1269 aa15.57■□□□□ 0.08
SMG6-215ENST00000574501 CNOT7Q9UIV1 285 aaKnown RBP15.57■□□□□ 0.08
SMG6-215ENST00000574501 TTC7AQ9ULT0 858 aaPredicted RBP15.57■□□□□ 0.08
SMG6-215ENST00000574501 JAG2Q9Y219 1238 aa15.57■□□□□ 0.08
SMG6-215ENST00000574501 IGSF9BQ9UPX0 1349 aa15.57■□□□□ 0.08
SMG6-215ENST00000574501 RREB1Q92766 1687 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 A0A1B0GUL6 1792 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 LRRD1A4D1F6 860 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 GFPT2O94808 682 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 NR2F2P24468 414 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 GNA11P29992 359 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 MARSP56192 900 aaKnown RBP15.56■□□□□ 0.08
SMG6-215ENST00000574501 ADCY1Q08828 1119 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 ZNF34Q8IZ26 560 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 ANKLE1Q8NAG6 615 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 ARHGEF2Q92974 986 aaKnown RBP15.56■□□□□ 0.08
SMG6-215ENST00000574501 SYT15Q9BQS2 421 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 ZCWPW1Q9H0M4 648 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 KCTD10Q9H3F6 313 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 FAM187AA6NFU0 413 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 FERP16591 822 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 FXR2P51116 673 aaKnown RBP eCLIP15.56■□□□□ 0.08
SMG6-215ENST00000574501 DIXDC1Q155Q3 683 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 TNFAIP8L3Q5GJ75 292 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 BRINP3Q76B58 766 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 VPS36Q86VN1 386 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 REXO1Q8N1G1 1221 aaKnown RBP15.56■□□□□ 0.08
SMG6-215ENST00000574501 TMEM237Q96Q45 408 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 SLC4A9Q96Q91 983 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 DDX23Q9BUQ8 820 aaKnown RBP15.56■□□□□ 0.08
SMG6-215ENST00000574501 STMN4Q9H169 189 aaPredicted RBP15.56■□□□□ 0.08
SMG6-215ENST00000574501 MKNK2Q9HBH9 465 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 EMILIN3Q9NT22 766 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 ARPP21Q9UBL0 812 aaPredicted RBP15.56■□□□□ 0.08
SMG6-215ENST00000574501 CTNNAL1Q9UBT7 734 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 NENFQ9UMX5 172 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 ZNF804BA4D1E1 1349 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 SLIT2O94813 1529 aa15.56■□□□□ 0.08
SMG6-215ENST00000574501 A0A0A6YYK5 440 aaPredicted RBP15.55■□□□□ 0.08
SMG6-215ENST00000574501 PALM3A6NDB9 673 aaPredicted RBP15.55■□□□□ 0.08
SMG6-215ENST00000574501 H0Y3Z8 333 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 CETN3O15182 167 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 ADAMTS2O95450 1211 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 TSPY3P0CV98 308 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 TSPY8P0CW00 308 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 IL2RBP14784 551 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 GBP1P32455 592 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 TRAF1Q13077 416 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 CCDC152Q4G0S7 254 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 TCERG1LQ5VWI1 586 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 ARMC3Q5W041 872 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 CGB2Q6NT52 195 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 GLYCTKQ8IVS8 523 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 SLC44A5Q8NCS7 719 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 LNX1Q8TBB1 728 aaPredicted RBP15.55■□□□□ 0.08
SMG6-215ENST00000574501 FBF1Q8TES7 1133 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 TEKT4Q8WW24 435 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 ALG3Q92685 438 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 TMEM47Q9BQJ4 181 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 MOV10L1Q9BXT6 1211 aaKnown RBP15.55■□□□□ 0.08
SMG6-215ENST00000574501 TRIM7Q9C029 511 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 ATP8A2Q9NTI2 1148 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 IRAK4Q9NWZ3 460 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 PRKAG3Q9UGI9 489 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 RASAL2Q9UJF2 1139 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 PTPN22Q9Y2R2 807 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 LRRC42Q9Y546 428 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 COL22A1Q8NFW1 1626 aaPredicted RBP15.55■□□□□ 0.08
SMG6-215ENST00000574501 ANKRD63C9JTQ0 380 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 E9PMD0 336 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 UNC5CO95185 931 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 ACSL3O95573 720 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 CYP19A1P11511 503 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms