RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 STRA6Q9BX79 667 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 TISP43B9A030 160 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 RGS20O76081 388 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 TRIM49P0CI25 452 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 TRIM49CP0CI26 452 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 PEX3P56589 373 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 SH3D19Q5HYK7 790 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 FAM102BQ5T8I3 360 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 DPY19L2P1Q6NXN4 242 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 DHX37Q8IY37 1157 aaKnown RBP11.44□□□□□ -0.58
USP43-205ENST00000574408 GPR161Q8N6U8 529 aaKnown RBP11.44□□□□□ -0.58
USP43-205ENST00000574408 DRC1Q96MC2 740 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 DMAC2Q9NW81 257 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 ARGLU1Q9NWB6 273 aaPredicted RBP11.44□□□□□ -0.58
USP43-205ENST00000574408 GABBR1Q9UBS5 961 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 MYPNQ86TC9 1320 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 MAFGO15525 162 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 KCNA2P16389 499 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 TRAPPC11Q7Z392 1133 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 PCIF1Q9H4Z3 704 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 AIPL1Q9NZN9 384 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 CAPN6Q9Y6Q1 641 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 DICER1Q9UPY3 1922 aaKnown RBP11.44□□□□□ -0.58
USP43-205ENST00000574408 CTAGE15A4D2H0 777 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 SLC16A4O15374 487 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 TACC1O75410 805 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 MOCS3O95396 460 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 CTAGE8P0CG41 777 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 GJB7Q6PEY0 223 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 HAUS6Q7Z4H7 955 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 CTAGE6Q86UF2 777 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 CTAGE4Q8IX94 777 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 KRT222Q8N1A0 295 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 RDM1Q8NG50 284 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 ACCSQ96QU6 501 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 ANKEF1Q9NU02 776 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 TELO2Q9Y4R8 837 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 SAR1BQ9Y6B6 198 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 SRGAP2O75044 1071 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 ALCAMQ13740 583 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 GNPTABQ3T906 1256 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 GADL1Q6ZQY3 521 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 ANO5Q75V66 913 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 ANKRD35Q8N283 1001 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 TRIM58Q8NG06 486 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 TMEM206Q9H813 350 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 JPH1Q9HDC5 661 aaPredicted RBP11.43□□□□□ -0.58
USP43-205ENST00000574408 RNF216Q9NWF9 866 aaPredicted RBP11.43□□□□□ -0.58
USP43-205ENST00000574408 OGFRQ9NZT2 677 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 ADAMTS1Q9UHI8 967 aa11.43□□□□□ -0.58
USP43-205ENST00000574408 GTPBP10A4D1E9 387 aaKnown RBP11.42□□□□□ -0.58
USP43-205ENST00000574408 MAPTP10636 758 aaKnown RBP11.42□□□□□ -0.58
USP43-205ENST00000574408 FMO5P49326 533 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 GYS2P54840 703 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 SWSAP1Q6NVH7 229 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 CDHR1Q96JP9 859 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 CAPZA3Q96KX2 299 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 ELP3Q9H9T3 547 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 SIX2Q9NPC8 291 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 AJAP1Q9UKB5 411 aaPredicted RBP11.42□□□□□ -0.58
USP43-205ENST00000574408 A0A087X0T9 212 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 CCDC66A2RUB6 948 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 CCDC169A6NNP5 214 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 ZNF862O60290 1169 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 FAM228BP0C875 321 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 CNTN2Q02246 1040 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 PAPD7Q5XG87 772 aaKnown RBP11.42□□□□□ -0.58
USP43-205ENST00000574408 TXLNBQ8N3L3 684 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 ATP6V0A1Q93050 837 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 CEP170P1Q96L14 293 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 CBWD1Q9BRT8 395 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 LUC7LQ9NQ29 371 aaKnown RBP11.42□□□□□ -0.58
USP43-205ENST00000574408 ZNF446Q9NWS9 450 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 SLC9A2Q9UBY0 812 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 ANO9A1A5B4 782 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 RBAK-RBAKDNI3L0D1 243 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 PJA2O43164 708 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 NAP1L1P55209 391 aaKnown RBP11.42□□□□□ -0.58
USP43-205ENST00000574408 PPARDQ03181 441 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 SLC18A3Q16572 532 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 CBWD6Q4V339 395 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 CBWD3Q5JTY5 395 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 CBWD5Q5RIA9 395 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 SLC9A9Q8IVB4 645 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 OTUD5Q96G74 571 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 ALS2CR12Q96Q35 445 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 SENP7Q9BQF6 1050 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 TIPINQ9BVW5 301 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 PARD6BQ9BYG5 372 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 ZCCHC17Q9NP64 241 aaKnown RBP11.42□□□□□ -0.58
USP43-205ENST00000574408 SALL4Q9UJQ4 1053 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 SBF1O95248 1867 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 SRCAPQ6ZRS2 3230 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 KIAA1217Q5T5P2 1943 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 MYH10P35580 1976 aa11.42□□□□□ -0.58
USP43-205ENST00000574408 TULP1O00294 542 aaPredicted RBP11.41□□□□□ -0.58
USP43-205ENST00000574408 BUB1O43683 1085 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 PHACTR2O75167 634 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 PSAPP07602 524 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 PNMA6AP0CW24 399 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms