RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 RUFY4Q6ZNE9 571 aa15.04■□□□□ -0
NDE1-209ENST00000574109 C1orf186Q6ZWK4 172 aa15.04■□□□□ -0
NDE1-209ENST00000574109 LRRC8DQ7L1W4 858 aa15.04■□□□□ -0
NDE1-209ENST00000574109 LRRC71Q8N4P6 559 aa15.04■□□□□ -0
NDE1-209ENST00000574109 USP38Q8NB14 1042 aa15.04■□□□□ -0
NDE1-209ENST00000574109 SLC17A8Q8NDX2 589 aa15.04■□□□□ -0
NDE1-209ENST00000574109 DHX38Q92620 1227 aaKnown RBP15.04■□□□□ -0
NDE1-209ENST00000574109 DPF3Q92784 378 aa15.04■□□□□ -0
NDE1-209ENST00000574109 IFT74Q96LB3 600 aa15.04■□□□□ -0
NDE1-209ENST00000574109 PLIN2Q99541 437 aa15.04■□□□□ -0
NDE1-209ENST00000574109 FAM49AQ9H0Q0 323 aaPredicted RBP15.04■□□□□ -0
NDE1-209ENST00000574109 SUGCTQ9HAC7 445 aa15.04■□□□□ -0
NDE1-209ENST00000574109 XPNPEP1Q9NQW7 623 aa15.04■□□□□ -0
NDE1-209ENST00000574109 PRDM5Q9NQX1 630 aaPredicted RBP15.04■□□□□ -0
NDE1-209ENST00000574109 KBTBD4Q9NVX7 518 aa15.04■□□□□ -0
NDE1-209ENST00000574109 COL4A3BPQ9Y5P4 624 aa15.04■□□□□ -0
NDE1-209ENST00000574109 TRPV2Q9Y5S1 764 aa15.04■□□□□ -0
NDE1-209ENST00000574109 TNRC18O15417 2968 aaPredicted RBP15.03■□□□□ -0
NDE1-209ENST00000574109 H0YCG3 227 aa15.03■□□□□ -0
NDE1-209ENST00000574109 KINO60870 393 aaKnown RBP15.03■□□□□ -0
NDE1-209ENST00000574109 TIMP1P01033 207 aa15.03■□□□□ -0
NDE1-209ENST00000574109 KRT18P05783 430 aaKnown RBP15.03■□□□□ -0
NDE1-209ENST00000574109 PFKMP08237 780 aa15.03■□□□□ -0
NDE1-209ENST00000574109 RAG1P15918 1043 aa15.03■□□□□ -0
NDE1-209ENST00000574109 POU5F1BQ06416 359 aa15.03■□□□□ -0
NDE1-209ENST00000574109 DMP1Q13316 513 aaPredicted RBP15.03■□□□□ -0
NDE1-209ENST00000574109 MCM6Q14566 821 aa15.03■□□□□ -0
NDE1-209ENST00000574109 FAM26DQ5JW98 314 aa15.03■□□□□ -0
NDE1-209ENST00000574109 KIAA0319LQ8IZA0 1049 aa15.03■□□□□ -0
NDE1-209ENST00000574109 PPP1R13LQ8WUF5 828 aa15.03■□□□□ -0
NDE1-209ENST00000574109 DNAJB3Q8WWF6 145 aa15.03■□□□□ -0
NDE1-209ENST00000574109 TIGD1Q96MW7 591 aa15.03■□□□□ -0
NDE1-209ENST00000574109 SCLT1Q96NL6 688 aa15.03■□□□□ -0
NDE1-209ENST00000574109 SH2D3AQ9BRG2 576 aa15.03■□□□□ -0
NDE1-209ENST00000574109 RUSC1Q9BVN2 902 aa15.03■□□□□ -0
NDE1-209ENST00000574109 NFKBIZQ9BYH8 718 aa15.03■□□□□ -0
NDE1-209ENST00000574109 INO80BQ9C086 356 aaPredicted RBP15.03■□□□□ -0
NDE1-209ENST00000574109 POLR3FQ9H1D9 316 aaPredicted RBP15.03■□□□□ -0
NDE1-209ENST00000574109 C2orf40Q9H1Z8 148 aa15.03■□□□□ -0
NDE1-209ENST00000574109 LARSQ9P2J5 1176 aaKnown RBP15.03■□□□□ -0
NDE1-209ENST00000574109 SUCLA2Q9P2R7 463 aaPredicted RBP15.03■□□□□ -0
NDE1-209ENST00000574109 SEL1LQ9UBV2 794 aa15.03■□□□□ -0
NDE1-209ENST00000574109 ACTN4O43707 911 aaKnown RBP15.02■□□□□ -0
NDE1-209ENST00000574109 MBD3O95983 291 aa15.02■□□□□ -0
NDE1-209ENST00000574109 ARL2P36404 184 aa15.02■□□□□ -0
NDE1-209ENST00000574109 NAMPTP43490 491 aa15.02■□□□□ -0
NDE1-209ENST00000574109 PHKA2P46019 1235 aa15.02■□□□□ -0
NDE1-209ENST00000574109 FAM102BQ5T8I3 360 aa15.02■□□□□ -0
NDE1-209ENST00000574109 ELOA2Q8IYF1 753 aaPredicted RBP15.02■□□□□ -0
NDE1-209ENST00000574109 FMR1NBQ8N0W7 255 aaPredicted RBP15.02■□□□□ -0
NDE1-209ENST00000574109 TMEM199Q8N511 208 aa15.02■□□□□ -0
NDE1-209ENST00000574109 CNNM3Q8NE01 707 aa15.02■□□□□ -0
NDE1-209ENST00000574109 GOLPH3LQ9H4A5 285 aa15.02■□□□□ -0
NDE1-209ENST00000574109 RSPH10B2B2RC85 870 aa15.01□□□□□ -0.01
NDE1-209ENST00000574109 HIP1RO75146 1068 aa15.01□□□□□ -0.01
NDE1-209ENST00000574109 PRPF40AO75400 957 aaKnown RBP15.01□□□□□ -0.01
NDE1-209ENST00000574109 FAM13AO94988 1023 aa15.01□□□□□ -0.01
NDE1-209ENST00000574109 ZNF202O95125 648 aa15.01□□□□□ -0.01
NDE1-209ENST00000574109 RSPH10BP0C881 870 aa15.01□□□□□ -0.01
NDE1-209ENST00000574109 GAP43P17677 238 aa15.01□□□□□ -0.01
NDE1-209ENST00000574109 GPC3P51654 580 aa15.01□□□□□ -0.01
NDE1-209ENST00000574109 ZNF131P52739 623 aa15.01□□□□□ -0.01
NDE1-209ENST00000574109 CRYBB1P53674 252 aaPredicted RBP15.01□□□□□ -0.01
NDE1-209ENST00000574109 MGAT3Q09327 533 aa15.01□□□□□ -0.01
NDE1-209ENST00000574109 MFSD5Q6N075 450 aa15.01□□□□□ -0.01
NDE1-209ENST00000574109 KRBA2Q6ZNG9 492 aa15.01□□□□□ -0.01
NDE1-209ENST00000574109 RHPN2Q8IUC4 686 aa15.01□□□□□ -0.01
NDE1-209ENST00000574109 ZBTB8OSQ8IWT0 167 aa15.01□□□□□ -0.01
NDE1-209ENST00000574109 LRRC15Q8TF66 581 aa15.01□□□□□ -0.01
NDE1-209ENST00000574109 NLRP7Q8WX94 980 aa15.01□□□□□ -0.01
NDE1-209ENST00000574109 DDX12PQ92771 950 aa15.01□□□□□ -0.01
NDE1-209ENST00000574109 TMEM143Q96AN5 459 aa15.01□□□□□ -0.01
NDE1-209ENST00000574109 REEP2Q9BRK0 252 aa15.01□□□□□ -0.01
NDE1-209ENST00000574109 CELF4Q9BZC1 486 aaKnown RBP15.01□□□□□ -0.01
NDE1-209ENST00000574109 GCOM2Q9BZD3 368 aaPredicted RBP15.01□□□□□ -0.01
NDE1-209ENST00000574109 TRIM9Q9C026 710 aa15.01□□□□□ -0.01
NDE1-209ENST00000574109 PARVGQ9HBI0 331 aa15.01□□□□□ -0.01
NDE1-209ENST00000574109 CDY2AQ9Y6F7 541 aa15.01□□□□□ -0.01
NDE1-209ENST00000574109 VTNP04004 478 aa15□□□□□ -0.01
NDE1-209ENST00000574109 CTSHP09668 335 aa15□□□□□ -0.01
NDE1-209ENST00000574109 PLS3P13797 630 aa15□□□□□ -0.01
NDE1-209ENST00000574109 SFPQP23246 707 aaKnown RBP eCLIP15□□□□□ -0.01
NDE1-209ENST00000574109 EFNA5P52803 228 aa15□□□□□ -0.01
NDE1-209ENST00000574109 SMTNP53814 917 aa15□□□□□ -0.01
NDE1-209ENST00000574109 LAMTOR4Q0VGL1 99 aa15□□□□□ -0.01
NDE1-209ENST00000574109 PPIGQ13427 754 aaKnown RBP eCLIP15□□□□□ -0.012e-7■□□□□ 10.4
NDE1-209ENST00000574109 DHX8Q14562 1220 aaKnown RBP15□□□□□ -0.01
NDE1-209ENST00000574109 ZNF618Q5T7W0 954 aa15□□□□□ -0.01
NDE1-209ENST00000574109 CDCA2Q69YH5 1023 aaPredicted RBP15□□□□□ -0.01
NDE1-209ENST00000574109 TSHZ1Q6ZSZ6 1077 aa15□□□□□ -0.01
NDE1-209ENST00000574109 SRGAP1Q7Z6B7 1085 aa15□□□□□ -0.01
NDE1-209ENST00000574109 IFNLR1Q8IU57 520 aaPredicted RBP15□□□□□ -0.01
NDE1-209ENST00000574109 CCDC65Q8IXS2 484 aa15□□□□□ -0.01
NDE1-209ENST00000574109 ENGASEQ8NFI3 743 aa15□□□□□ -0.01
NDE1-209ENST00000574109 TET1Q8NFU7 2136 aa15□□□□□ -0.01
NDE1-209ENST00000574109 PRPF31Q8WWY3 499 aaKnown RBP15□□□□□ -0.01
NDE1-209ENST00000574109 APBB2Q92870 758 aa15□□□□□ -0.01
NDE1-209ENST00000574109 KCNN1Q92952 543 aa15□□□□□ -0.01
NDE1-209ENST00000574109 WNT8BQ93098 351 aa15□□□□□ -0.01
NDE1-209ENST00000574109 CCDC47Q96A33 483 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms