RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 CEP131Q9UPN4 1083 aa11.24□□□□□ -0.61
RPA1-206ENST00000573994 PCDHGA10Q9Y5H3 936 aa11.24□□□□□ -0.61
RPA1-206ENST00000573994 SQORQ9Y6N5 450 aa11.24□□□□□ -0.61
RPA1-206ENST00000573994 ADGRA3Q8IWK6 1321 aa11.24□□□□□ -0.61
RPA1-206ENST00000573994 KDM3AQ9Y4C1 1321 aa11.24□□□□□ -0.61
RPA1-206ENST00000573994 MUC3AQ02505 3323 aa11.24□□□□□ -0.61
RPA1-206ENST00000573994 COL4A6Q14031 1691 aa11.24□□□□□ -0.61
RPA1-206ENST00000573994 EML1O00423 815 aa11.23□□□□□ -0.61
RPA1-206ENST00000573994 RPS6KA5O75582 802 aa11.23□□□□□ -0.61
RPA1-206ENST00000573994 GCFC2P16383 781 aaKnown RBP11.23□□□□□ -0.61
RPA1-206ENST00000573994 GATMP50440 423 aa11.23□□□□□ -0.61
RPA1-206ENST00000573994 GUCY1B3Q02153 619 aa11.23□□□□□ -0.61
RPA1-206ENST00000573994 MTERF2Q49AM1 385 aa11.23□□□□□ -0.61
RPA1-206ENST00000573994 PAN2Q504Q3 1202 aaKnown RBP11.23□□□□□ -0.61
RPA1-206ENST00000573994 EPC2Q52LR7 807 aa11.23□□□□□ -0.61
RPA1-206ENST00000573994 TJAP1Q5JTD0 557 aa11.23□□□□□ -0.61
RPA1-206ENST00000573994 PLA2G4FQ68DD2 849 aa11.23□□□□□ -0.61
RPA1-206ENST00000573994 EFCAB12Q6NXP0 572 aa11.23□□□□□ -0.61
RPA1-206ENST00000573994 B3GNT9Q6UX72 402 aa11.23□□□□□ -0.61
RPA1-206ENST00000573994 RTN4RL1Q86UN2 441 aaPredicted RBP11.23□□□□□ -0.61
RPA1-206ENST00000573994 FAM228AQ86W67 206 aa11.23□□□□□ -0.61
RPA1-206ENST00000573994 DIS3L2Q8IYB7 885 aaKnown RBP11.23□□□□□ -0.61
RPA1-206ENST00000573994 FIBCD1Q8N539 461 aa11.23□□□□□ -0.61
RPA1-206ENST00000573994 LINC01465Q8N7H1 131 aa11.23□□□□□ -0.61
RPA1-206ENST00000573994 RDM1Q8NG50 284 aa11.23□□□□□ -0.61
RPA1-206ENST00000573994 TNFRSF25Q93038 417 aa11.23□□□□□ -0.61
RPA1-206ENST00000573994 SCLT1Q96NL6 688 aa11.23□□□□□ -0.61
RPA1-206ENST00000573994 MAP7D2Q96T17 732 aa11.23□□□□□ -0.61
RPA1-206ENST00000573994 RC3H2Q9HBD1 1191 aaKnown RBP11.23□□□□□ -0.61
RPA1-206ENST00000573994 ERVK-5Q9HDB9 667 aa11.23□□□□□ -0.61
RPA1-206ENST00000573994 KCNMB3Q9NPA1 279 aa11.23□□□□□ -0.61
RPA1-206ENST00000573994 NRBP2Q9NSY0 501 aa11.23□□□□□ -0.61
RPA1-206ENST00000573994 DENND3A2RUS2 1198 aa11.22□□□□□ -0.61
RPA1-206ENST00000573994 BTBD18B2RXH4 712 aa11.22□□□□□ -0.61
RPA1-206ENST00000573994 WNT7AO00755 349 aa11.22□□□□□ -0.61
RPA1-206ENST00000573994 MAGEB2O15479 319 aa11.22□□□□□ -0.61
RPA1-206ENST00000573994 MARCH6O60337 910 aa11.22□□□□□ -0.61
RPA1-206ENST00000573994 GPR32O75388 356 aa11.22□□□□□ -0.61
RPA1-206ENST00000573994 MMP1P03956 469 aa11.22□□□□□ -0.61
RPA1-206ENST00000573994 POU3F3P20264 500 aaPredicted RBP11.22□□□□□ -0.61
RPA1-206ENST00000573994 CRYBB1P53674 252 aaPredicted RBP11.22□□□□□ -0.61
RPA1-206ENST00000573994 TBC1D8BQ0IIM8 1120 aa11.22□□□□□ -0.61
RPA1-206ENST00000573994 DRP2Q13474 957 aa11.22□□□□□ -0.61
RPA1-206ENST00000573994 TRIM29Q14134 588 aa11.22□□□□□ -0.61
RPA1-206ENST00000573994 BTG3Q14201 252 aaPredicted RBP11.22□□□□□ -0.61
RPA1-206ENST00000573994 XKR3Q5GH77 459 aa11.22□□□□□ -0.61
RPA1-206ENST00000573994 NCAPH2Q6IBW4 605 aa11.22□□□□□ -0.61
RPA1-206ENST00000573994 PPP4R3AQ6IN85 833 aa11.22□□□□□ -0.61
RPA1-206ENST00000573994 NPAS4Q8IUM7 802 aa11.22□□□□□ -0.61
RPA1-206ENST00000573994 TMEM192Q8IY95 271 aa11.22□□□□□ -0.61
RPA1-206ENST00000573994 IL27Q8NEV9 243 aa11.22□□□□□ -0.61
RPA1-206ENST00000573994 HAS1Q92839 578 aa11.22□□□□□ -0.61
RPA1-206ENST00000573994 FTHL17Q9BXU8 183 aa11.22□□□□□ -0.61
RPA1-206ENST00000573994 ST3GAL5Q9UNP4 418 aa11.22□□□□□ -0.61
RPA1-206ENST00000573994 LIMCH1Q9UPQ0 1083 aa11.22□□□□□ -0.61
RPA1-206ENST00000573994 MRPL42Q9Y6G3 142 aaKnown RBP11.22□□□□□ -0.61
RPA1-206ENST00000573994 KAT6AQ92794 2004 aa11.21□□□□□ -0.61
RPA1-206ENST00000573994 DDX11L8A8MPP1 907 aa11.21□□□□□ -0.61
RPA1-206ENST00000573994 DGKIO75912 1065 aa11.21□□□□□ -0.61
RPA1-206ENST00000573994 STBD1O95210 358 aa11.21□□□□□ -0.61
RPA1-206ENST00000573994 LINC00271P0C7V0 271 aa11.21□□□□□ -0.61
RPA1-206ENST00000573994 FGFR4P22455 802 aa11.21□□□□□ -0.61
RPA1-206ENST00000573994 TMOD1P28289 359 aa11.21□□□□□ -0.61
RPA1-206ENST00000573994 KCNQ1P51787 676 aa11.21□□□□□ -0.61
RPA1-206ENST00000573994 NLRP11P59045 1033 aaKnown RBP11.21□□□□□ -0.61
RPA1-206ENST00000573994 MRPS5P82675 430 aaKnown RBP11.21□□□□□ -0.61
RPA1-206ENST00000573994 PPP2R5CQ13362 524 aa11.21□□□□□ -0.61
RPA1-206ENST00000573994 GPM6BQ13491 265 aa11.21□□□□□ -0.61
RPA1-206ENST00000573994 TARBP2Q15633 366 aaKnown RBP11.21□□□□□ -0.61
RPA1-206ENST00000573994 ATXN2LQ8WWM7 1075 aaKnown RBP11.21□□□□□ -0.61
RPA1-206ENST00000573994 NLRP7Q8WX94 980 aa11.21□□□□□ -0.61
RPA1-206ENST00000573994 FAM20AQ96MK3 541 aa11.21□□□□□ -0.61
RPA1-206ENST00000573994 SAMD11Q96NU1 681 aa11.21□□□□□ -0.61
RPA1-206ENST00000573994 ASB2Q96Q27 587 aa11.21□□□□□ -0.61
RPA1-206ENST00000573994 KIF2CQ99661 725 aa11.21□□□□□ -0.61
RPA1-206ENST00000573994 NAP1L4Q99733 375 aaKnown RBP11.21□□□□□ -0.61
RPA1-206ENST00000573994 ADAM2Q99965 735 aa11.21□□□□□ -0.61
RPA1-206ENST00000573994 ADAMTS10Q9H324 1103 aa11.21□□□□□ -0.61
RPA1-206ENST00000573994 PLA2G2EQ9NZK7 142 aa11.21□□□□□ -0.61
RPA1-206ENST00000573994 WRAP73Q9P2S5 460 aaPredicted RBP11.21□□□□□ -0.61
RPA1-206ENST00000573994 LRFN2Q9ULH4 789 aa11.21□□□□□ -0.61
RPA1-206ENST00000573994 GPR182O15218 404 aa11.2□□□□□ -0.62
RPA1-206ENST00000573994 CSDE1O75534 798 aaKnown RBP11.2□□□□□ -0.62
RPA1-206ENST00000573994 ATP2B1P20020 1258 aa11.2□□□□□ -0.62
RPA1-206ENST00000573994 SARSP49591 514 aaKnown RBP11.2□□□□□ -0.62
RPA1-206ENST00000573994 GPC3P51654 580 aa11.2□□□□□ -0.62
RPA1-206ENST00000573994 PSMC5P62195 406 aa11.2□□□□□ -0.62
RPA1-206ENST00000573994 CYP4A11Q02928 519 aa11.2□□□□□ -0.62
RPA1-206ENST00000573994 CALCRLQ16602 461 aa11.2□□□□□ -0.62
RPA1-206ENST00000573994 ODR4Q5SWX8 454 aa11.2□□□□□ -0.62
RPA1-206ENST00000573994 ANO5Q75V66 913 aa11.2□□□□□ -0.62
RPA1-206ENST00000573994 ADAMTS19Q8TE59 1207 aa11.2□□□□□ -0.62
RPA1-206ENST00000573994 ZNF689Q96CS4 500 aaPredicted RBP11.2□□□□□ -0.62
RPA1-206ENST00000573994 CEP89Q96ST8 783 aa11.2□□□□□ -0.62
RPA1-206ENST00000573994 LXNQ9BS40 222 aa11.2□□□□□ -0.62
RPA1-206ENST00000573994 RGL1Q9NZL6 768 aa11.2□□□□□ -0.62
RPA1-206ENST00000573994 LMCD1Q9NZU5 365 aa11.2□□□□□ -0.62
RPA1-206ENST00000573994 H3BNC9 293 aa11.19□□□□□ -0.62
RPA1-206ENST00000573994 TBX3O15119 743 aa11.19□□□□□ -0.62
RPA1-206ENST00000573994 GRM6O15303 877 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms