RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 TYW1Q9NV66 732 aaKnown RBP17.45■□□□□ 0.38
USP43-204ENST00000573955 ARMCX3Q9UH62 379 aaPredicted RBP17.45■□□□□ 0.38
USP43-204ENST00000573955 ZNF214Q9UL59 606 aaPredicted RBP17.45■□□□□ 0.38
USP43-204ENST00000573955 DUSP10Q9Y6W6 482 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 USO1O60763 962 aaKnown RBP17.44■□□□□ 0.38
USP43-204ENST00000573955 P4HBP07237 508 aaKnown RBP17.44■□□□□ 0.38
USP43-204ENST00000573955 ACTN1P12814 892 aa17.44■□□□□ 0.38
USP43-204ENST00000573955 ARID5AQ03989 594 aa17.44■□□□□ 0.38
USP43-204ENST00000573955 PPP2R3AQ06190 1150 aa17.44■□□□□ 0.38
USP43-204ENST00000573955 ADCY2Q08462 1091 aa17.44■□□□□ 0.38
USP43-204ENST00000573955 BAP1Q92560 729 aa17.44■□□□□ 0.38
USP43-204ENST00000573955 LACRTQ9GZZ8 138 aa17.44■□□□□ 0.38
USP43-204ENST00000573955 PLAGL2Q9UPG8 496 aa17.44■□□□□ 0.38
USP43-204ENST00000573955 DICER1Q9UPY3 1922 aaKnown RBP17.44■□□□□ 0.38
USP43-204ENST00000573955 ZMYM2Q9UBW7 1377 aa17.44■□□□□ 0.38
USP43-204ENST00000573955 PDXKO00764 312 aa17.44■□□□□ 0.38
USP43-204ENST00000573955 TGFB1I1O43294 461 aa17.44■□□□□ 0.38
USP43-204ENST00000573955 NOL4O94818 638 aa17.44■□□□□ 0.38
USP43-204ENST00000573955 KCNA4P22459 653 aa17.44■□□□□ 0.38
USP43-204ENST00000573955 NF2P35240 595 aa17.44■□□□□ 0.38
USP43-204ENST00000573955 EIF4A3P38919 411 aaKnown RBP17.44■□□□□ 0.38
USP43-204ENST00000573955 REPS2Q8NFH8 660 aa17.44■□□□□ 0.38
USP43-204ENST00000573955 TATDN2Q93075 761 aa17.44■□□□□ 0.38
USP43-204ENST00000573955 JAKMIP2Q96AA8 810 aa17.44■□□□□ 0.38
USP43-204ENST00000573955 IRAK4Q9NWZ3 460 aa17.44■□□□□ 0.38
USP43-204ENST00000573955 ZNF263O14978 683 aa17.43■□□□□ 0.38
USP43-204ENST00000573955 USP2O75604 605 aaPredicted RBP17.43■□□□□ 0.38
USP43-204ENST00000573955 LIG3P49916 1009 aa17.43■□□□□ 0.38
USP43-204ENST00000573955 GHRHRQ02643 423 aa17.43■□□□□ 0.38
USP43-204ENST00000573955 VGLL4Q14135 290 aa17.43■□□□□ 0.38
USP43-204ENST00000573955 CCDC43Q96MW1 224 aaKnown RBP17.43■□□□□ 0.38
USP43-204ENST00000573955 FIZ1Q96SL8 496 aa17.43■□□□□ 0.38
USP43-204ENST00000573955 CTAGE9A4FU28 777 aa17.43■□□□□ 0.38
USP43-204ENST00000573955 ENC1O14682 589 aa17.43■□□□□ 0.38
USP43-204ENST00000573955 CAND2O75155 1236 aa17.43■□□□□ 0.38
USP43-204ENST00000573955 CCNE2O96020 404 aa17.43■□□□□ 0.38
USP43-204ENST00000573955 SUPT20HL1Q3ZLR7 823 aa17.43■□□□□ 0.38
USP43-204ENST00000573955 TDRD12Q587J7 1177 aaKnown RBP17.43■□□□□ 0.38
USP43-204ENST00000573955 FBXW10Q5XX13 1052 aa17.43■□□□□ 0.38
USP43-204ENST00000573955 PLA2G4FQ68DD2 849 aa17.43■□□□□ 0.38
USP43-204ENST00000573955 CATSPERGQ6ZRH7 1159 aa17.43■□□□□ 0.38
USP43-204ENST00000573955 NIPA1Q7RTP0 329 aa17.43■□□□□ 0.38
USP43-204ENST00000573955 ZC3H3Q8IXZ2 948 aaKnown RBP17.43■□□□□ 0.38
USP43-204ENST00000573955 DAW1Q8N136 415 aa17.43■□□□□ 0.38
USP43-204ENST00000573955 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.43■□□□□ 0.38
USP43-204ENST00000573955 PUF60Q9UHX1 559 aaKnown RBP17.43■□□□□ 0.38
USP43-204ENST00000573955 TELO2Q9Y4R8 837 aa17.43■□□□□ 0.38
USP43-204ENST00000573955 AFG3L2Q9Y4W6 797 aa17.43■□□□□ 0.38
USP43-204ENST00000573955 MACROD2A1Z1Q3 448 aa17.42■□□□□ 0.38
USP43-204ENST00000573955 C19orf81C9J6K1 198 aa17.42■□□□□ 0.38
USP43-204ENST00000573955 NR3C2P08235 984 aa17.42■□□□□ 0.38
USP43-204ENST00000573955 RDXP35241 583 aaKnown RBP17.42■□□□□ 0.38
USP43-204ENST00000573955 QARSP47897 775 aaKnown RBP17.42■□□□□ 0.38
USP43-204ENST00000573955 CYP2J2P51589 502 aa17.42■□□□□ 0.38
USP43-204ENST00000573955 MARSP56192 900 aaKnown RBP17.42■□□□□ 0.38
USP43-204ENST00000573955 KRT83P78385 493 aa17.42■□□□□ 0.38
USP43-204ENST00000573955 BMT2Q1RMZ1 405 aa17.42■□□□□ 0.38
USP43-204ENST00000573955 PDXDC1Q6P996 788 aa17.42■□□□□ 0.38
USP43-204ENST00000573955 ZNF720Q7Z2F6 126 aa17.42■□□□□ 0.38
USP43-204ENST00000573955 GPR161Q8N6U8 529 aaKnown RBP17.42■□□□□ 0.38
USP43-204ENST00000573955 CLMNQ96JQ2 1002 aa17.42■□□□□ 0.38
USP43-204ENST00000573955 PHIPQ8WWQ0 1821 aa17.42■□□□□ 0.38
USP43-204ENST00000573955 PARP14Q460N5 1801 aa17.42■□□□□ 0.38
USP43-204ENST00000573955 AKR1B10O60218 316 aa17.42■□□□□ 0.38
USP43-204ENST00000573955 XRCC5P13010 732 aaKnown RBP17.42■□□□□ 0.38
USP43-204ENST00000573955 SLC9A1P19634 815 aa17.42■□□□□ 0.38
USP43-204ENST00000573955 TREML2Q5T2D2 321 aa17.42■□□□□ 0.38
USP43-204ENST00000573955 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.42■□□□□ 0.38
USP43-204ENST00000573955 GPRC5CQ9NQ84 441 aa17.42■□□□□ 0.38
USP43-204ENST00000573955 MCM8Q9UJA3 840 aa17.42■□□□□ 0.38
USP43-204ENST00000573955 SPDYE16A6NNV3 312 aaPredicted RBP17.41■□□□□ 0.38
USP43-204ENST00000573955 K7ENM7 598 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 EPB41P11171 864 aaKnown RBP17.41■□□□□ 0.38
USP43-204ENST00000573955 YWHABP31946 246 aaKnown RBP17.41■□□□□ 0.38
USP43-204ENST00000573955 KIF11P52732 1056 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 NPEPPSP55786 919 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 MAPK7Q13164 816 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 RAPGEF1Q13905 1077 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 SPA17Q15506 151 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 CCDC170Q8IYT3 715 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 RDH13Q8NBN7 331 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 C12orf42Q96LP6 360 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 NAPGQ99747 312 aaPredicted RBP17.41■□□□□ 0.38
USP43-204ENST00000573955 HAUS4Q9H6D7 363 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 TBC1D22BQ9NU19 505 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 SNCAIPQ9Y6H5 919 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 RPL13P26373 211 aaKnown RBP17.41■□□□□ 0.38
USP43-204ENST00000573955 RARRES1P49788 294 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 SYCP3Q8IZU3 236 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 KCTD17Q8N5Z5 321 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 NEK9Q8TD19 979 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 SH3GL3Q99963 347 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 TEX13BQ9BXU2 312 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 PLEKHA4Q9H4M7 779 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 ADARB2Q9NS39 739 aaKnown RBP17.41■□□□□ 0.38
USP43-204ENST00000573955 MAP3K20Q9NYL2 800 aaKnown RBP17.41■□□□□ 0.38
USP43-204ENST00000573955 CEP72Q9P209 647 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 FAM184BQ9ULE4 1060 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 RPS6KL1Q9Y6S9 549 aa17.41■□□□□ 0.38
USP43-204ENST00000573955 RLFQ13129 1914 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms