RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 ZNF467Q7Z7K2 595 aaPredicted RBP31.97■■■□□ 2.71
CTDNEP1-208ENST00000573600 SLC9A9Q8IVB4 645 aa31.97■■■□□ 2.71
CTDNEP1-208ENST00000573600 KSR1Q8IVT5 923 aa31.97■■■□□ 2.71
CTDNEP1-208ENST00000573600 ZNF397Q8NF99 534 aaPredicted RBP31.97■■■□□ 2.71
CTDNEP1-208ENST00000573600 SPIRE2Q8WWL2 714 aa31.97■■■□□ 2.71
CTDNEP1-208ENST00000573600 NIFKQ9BYG3 293 aaKnown RBP31.97■■■□□ 2.71
CTDNEP1-208ENST00000573600 NRBP2Q9NSY0 501 aa31.97■■■□□ 2.71
CTDNEP1-208ENST00000573600 RASSF10A6NK89 507 aa31.96■■■□□ 2.71
CTDNEP1-208ENST00000573600 AKAP3O75969 853 aa31.96■■■□□ 2.71
CTDNEP1-208ENST00000573600 ARIH2O95376 493 aa31.96■■■□□ 2.71
CTDNEP1-208ENST00000573600 ATP4AP20648 1035 aa31.96■■■□□ 2.71
CTDNEP1-208ENST00000573600 PSMC2P35998 433 aaKnown RBP31.96■■■□□ 2.71
CTDNEP1-208ENST00000573600 ZBED6P86452 979 aa31.96■■■□□ 2.71
CTDNEP1-208ENST00000573600 TTLL4Q14679 1199 aa31.96■■■□□ 2.71
CTDNEP1-208ENST00000573600 CYP26C1Q6V0L0 522 aa31.96■■■□□ 2.71
CTDNEP1-208ENST00000573600 ARMCX2Q7L311 632 aa31.96■■■□□ 2.71
CTDNEP1-208ENST00000573600 RASAL3Q86YV0 1011 aa31.96■■■□□ 2.71
CTDNEP1-208ENST00000573600 FBXO16Q8IX29 292 aaPredicted RBP31.96■■■□□ 2.71
CTDNEP1-208ENST00000573600 TMEM174Q8WUU8 243 aa31.96■■■□□ 2.71
CTDNEP1-208ENST00000573600 ZCCHC17Q9NP64 241 aaKnown RBP31.96■■■□□ 2.71
CTDNEP1-208ENST00000573600 DMAC2Q9NW81 257 aa31.96■■■□□ 2.71
CTDNEP1-208ENST00000573600 MANSC4A6NHS7 340 aaPredicted RBP31.95■■■□□ 2.71
CTDNEP1-208ENST00000573600 KLK7P49862 253 aa31.95■■■□□ 2.71
CTDNEP1-208ENST00000573600 STAT5BP51692 787 aa31.95■■■□□ 2.71
CTDNEP1-208ENST00000573600 ZNF157P51786 506 aaPredicted RBP31.95■■■□□ 2.71
CTDNEP1-208ENST00000573600 MTERF2Q49AM1 385 aa31.95■■■□□ 2.71
CTDNEP1-208ENST00000573600 CCDC62Q6P9F0 684 aa31.95■■■□□ 2.71
CTDNEP1-208ENST00000573600 PPP1R13BQ96KQ4 1090 aa31.95■■■□□ 2.71
CTDNEP1-208ENST00000573600 C16orf45Q96MC5 204 aaPredicted RBP31.95■■■□□ 2.71
CTDNEP1-208ENST00000573600 NTPCRQ9BSD7 190 aaKnown RBP31.95■■■□□ 2.71
CTDNEP1-208ENST00000573600 XRCC5P13010 732 aaKnown RBP31.95■■■□□ 2.7
CTDNEP1-208ENST00000573600 TCF7P36402 384 aaPredicted RBP31.95■■■□□ 2.7
CTDNEP1-208ENST00000573600 PTPN14Q15678 1187 aa31.95■■■□□ 2.7
CTDNEP1-208ENST00000573600 SCFD2Q8WU76 684 aa31.95■■■□□ 2.7
CTDNEP1-208ENST00000573600 PCYT2Q99447 389 aa31.95■■■□□ 2.7
CTDNEP1-208ENST00000573600 EDEM3Q9BZQ6 932 aa31.95■■■□□ 2.7
CTDNEP1-208ENST00000573600 EXOC7Q9UPT5 735 aa31.95■■■□□ 2.7
CTDNEP1-208ENST00000573600 PPME1Q9Y570 386 aa31.95■■■□□ 2.7
CTDNEP1-208ENST00000573600 KIF2AO00139 706 aaPredicted RBP31.94■■■□□ 2.7
CTDNEP1-208ENST00000573600 SLC16A4O15374 487 aa31.94■■■□□ 2.7
CTDNEP1-208ENST00000573600 MAPK4P31152 587 aa31.94■■■□□ 2.7
CTDNEP1-208ENST00000573600 KCNH2Q12809 1159 aa31.94■■■□□ 2.7
CTDNEP1-208ENST00000573600 NYAP1Q6ZVC0 841 aa31.94■■■□□ 2.7
CTDNEP1-208ENST00000573600 GPR142Q7Z601 462 aa31.94■■■□□ 2.7
CTDNEP1-208ENST00000573600 DHX37Q8IY37 1157 aaKnown RBP31.94■■■□□ 2.7
CTDNEP1-208ENST00000573600 FAM167AQ96KS9 214 aa31.94■■■□□ 2.7
CTDNEP1-208ENST00000573600 AZI2Q9H6S1 392 aa31.94■■■□□ 2.7
CTDNEP1-208ENST00000573600 MMRN2Q9H8L6 949 aa31.94■■■□□ 2.7
CTDNEP1-208ENST00000573600 XPNPEP1Q9NQW7 623 aa31.94■■■□□ 2.7
CTDNEP1-208ENST00000573600 ABCD1P33897 745 aa31.93■■■□□ 2.7
CTDNEP1-208ENST00000573600 NPTX2P47972 431 aa31.93■■■□□ 2.7
CTDNEP1-208ENST00000573600 C12orf56Q8IXR9 622 aa31.93■■■□□ 2.7
CTDNEP1-208ENST00000573600 GPR20Q99678 358 aa31.93■■■□□ 2.7
CTDNEP1-208ENST00000573600 VTA1Q9NP79 307 aa31.93■■■□□ 2.7
CTDNEP1-208ENST00000573600 KMT5AQ9NQR1 393 aa31.93■■■□□ 2.7
CTDNEP1-208ENST00000573600 DIS3Q9Y2L1 958 aaKnown RBP31.93■■■□□ 2.7
CTDNEP1-208ENST00000573600 FRMD4BQ9Y2L6 1034 aa31.93■■■□□ 2.7
CTDNEP1-208ENST00000573600 SOWAHDA6NJG2 315 aa31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 CCDC169A6NNP5 214 aa31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 NOP56O00567 594 aaKnown RBP31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 AFPP02771 609 aaKnown RBP31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 TXNP10599 105 aaKnown RBP31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 TNNT1P13805 278 aa31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 CASP4P49662 377 aa31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 POLGP54098 1239 aaPredicted RBP31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 FAM186BQ8IYM0 893 aa31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 NEK11Q8NG66 645 aa31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 IFT74Q96LB3 600 aa31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 PPP2R2CQ9Y2T4 447 aa31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 GOLGA6L9A6NEM1 432 aa31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 H0YCG3 227 aa31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 LGR5O75473 907 aa31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 TUBB4AP04350 444 aa31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 KCNMA1Q12791 1236 aa31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 GRB14Q14449 540 aa31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 EMC2Q15006 297 aa31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 PLEKHH3Q7Z736 793 aa31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 TMEM161BQ8NDZ6 487 aa31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 AGPAT5Q9NUQ2 364 aa31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 ZNHIT6Q9NWK9 470 aaKnown RBP31.92■■■□□ 2.7
CTDNEP1-208ENST00000573600 RFC5P40937 340 aa31.91■■■□□ 2.7
CTDNEP1-208ENST00000573600 BORCS6Q96GS4 357 aa31.91■■■□□ 2.7
CTDNEP1-208ENST00000573600 IKZF4Q9H2S9 585 aa31.91■■■□□ 2.7
CTDNEP1-208ENST00000573600 DHX33Q9H6R0 707 aaKnown RBP31.91■■■□□ 2.7
CTDNEP1-208ENST00000573600 RGMBQ6NW40 437 aa31.9■■■□□ 2.7
CTDNEP1-208ENST00000573600 RAD9BQ6WBX8 426 aa31.9■■■□□ 2.7
CTDNEP1-208ENST00000573600 SPATA33Q96N06 139 aa31.9■■■□□ 2.7
CTDNEP1-208ENST00000573600 FAM207AQ9NSI2 230 aaPredicted RBP31.9■■■□□ 2.7
CTDNEP1-208ENST00000573600 SCP2P22307 547 aa31.89■■■□□ 2.7
CTDNEP1-208ENST00000573600 MEA1Q16626 185 aa31.89■■■□□ 2.7
CTDNEP1-208ENST00000573600 MAMDC4Q6UXC1 1216 aa31.89■■■□□ 2.7
CTDNEP1-208ENST00000573600 TOGARAM2Q6ZUX3 1019 aa31.89■■■□□ 2.7
CTDNEP1-208ENST00000573600 PLPPR4Q7Z2D5 763 aa31.89■■■□□ 2.7
CTDNEP1-208ENST00000573600 DPP9Q86TI2 863 aa31.89■■■□□ 2.7
CTDNEP1-208ENST00000573600 SAPCD2Q86UD0 394 aa31.89■■■□□ 2.7
CTDNEP1-208ENST00000573600 SLC7A3Q8WY07 619 aa31.89■■■□□ 2.7
CTDNEP1-208ENST00000573600 POLR3FQ9H1D9 316 aaPredicted RBP31.89■■■□□ 2.7
CTDNEP1-208ENST00000573600 TBX20Q9UMR3 447 aa31.89■■■□□ 2.7
CTDNEP1-208ENST00000573600 ZNF236Q9UL36 1845 aa31.89■■■□□ 2.7
CTDNEP1-208ENST00000573600 CCDC175P0C221 793 aa31.89■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms